prot_H-paniculata_contig953.17254.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig953.17254.1
Unique Nameprot_H-paniculata_contig953.17254.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length275
Homology
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Match: A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 2.200e-90
Identity = 163/278 (58.63%), Postives = 194/278 (69.78%), Query Frame = 0
Query:    1 MRSPCKVVVCLALSISGAGGFGLGLAPSRSSNVVNVVQQGSSSMLSGSTGIR-SYSSCCHGELGMGTSMSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQPAAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLNIKKIIDSLIVSASDDIDDPD---LLEEAVDLAQEAQALFTNFDASVYTIIFIPADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPAKKANLPKFLFKERSVLMEEKVSIS 274
            MRS C VV  L L +   G  G G  P         +  G++   +GST    S +  C     +  SM    SSRGE+ K+VLGG  LG A  FSP  ++ A A    L+EL A++M+ KEVF+PTLQYLKAEQFDAARTNTNYI R  N+KK IDS IV ASD +DDPD    +E+A D+AQE +ALFTNFD+SVYTIIFIPADA GVLPPGAEKYLKQAYGFYDDINK+LDFYI+LVP + +  A KLLPAK+A LP FLFKE+S LM+EKV+IS
Sbjct:    2 MRS-CDVVGMLMLVMGAQGFAGPGFLPG--------LCLGNAESAAGSTSAAASVAGRCPARQHVLPSMLLAGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS 270          
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 8.320e-86
Identity = 160/270 (59.26%), Postives = 189/270 (70.00%), Query Frame = 0
Query:    1 MRSPCKVVVCLALSISGAGGFGLGLAPSRSSNVVNVVQQGSSSMLSGSTGIRSYSSCCHGELGMGTSMSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQPAAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLNIKKIIDSLIVSASDDIDDPDLLEEAVDLAQEAQALFTNFDASVYTIIFIPADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPAKKANLPKFLFKERSVLMEEK 270
            MRS C VV  L L +   G  G G  P      V      S+  +S S    S +  C     +  SMS   SSRGE+ K+VLGG  LG A  FSP  ++ A A    L+EL A++M+ KEVF+PTLQYLKAEQFDAARTNTNYI R  N+KK IDS IV ASD ++DPD +E+A D+AQE +ALFTNFD+SVYTIIFIPADA GVLPPGAEKYLKQAYGFYDDINK+LDFYI+LVP + +  A KLLPAK+A LP FLFKE+S LM+EK
Sbjct:    2 MRSWCDVVGMLMLVMGAQGFAGPGFLPG-----VRPGHAESAGAVSTSAAA-SVAGRCPAPQRVLPSMSLAGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKEKSTLMKEK 265          
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Match: A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.210e-42
Identity = 89/199 (44.72%), Postives = 115/199 (57.79%), Query Frame = 0
Query:   68 MSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQP----AAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLNIKKIIDSLIVSASDDIDDPDLLEEAVDLAQEAQALFTNFDASVYTIIFIPADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPAKKANLPKFLFKE 262
            M +   SR  FT SV    VLG AA     WT P    AAA     ++  A LM+ K V  P+ +Y K  QFD+ARTN NYI RQL ++K I  +I+      DD  L+EEA DLA  A + F+N+D+S+YT+IFIP    G LP G++KY  QA  +YD    +LD +I+L P D RE A     A+   LP+FLFKE
Sbjct:    1 MGEASVSRRSFTSSV----VLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKE 195          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JS60_9PHAE2.200e-9058.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL66_ECTSI8.320e-8659.26TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YWX6_9STRA3.210e-4244.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..274
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.7
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig953contigH-paniculata_contig953:5211..9498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig953.17254.1mRNA_H-paniculata_contig953.17254.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig953 4242..9574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig953.17254.1 ID=prot_H-paniculata_contig953.17254.1|Name=mRNA_H-paniculata_contig953.17254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MRSPCKVVVCLALSISGAGGFGLGLAPSRSSNVVNVVQQGSSSMLSGSTG
IRSYSSCCHGELGMGTSMSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQ
PAAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLN
IKKIIDSLIVSASDDIDDPDLLEEAVDLAQEAQALFTNFDASVYTIIFIP
ADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPA
KKANLPKFLFKERSVLMEEKVSIS*
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