Homology
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Match:
A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE)
HSP 1 Score: 278 bits (712), Expect = 5.130e-86
Identity = 163/279 (58.42%), Postives = 195/279 (69.89%), Query Frame = 2
Query: 74 IMRSPCKVVVCLALSISGAGGFGLGLAPSRSSNVVNVVQQGSSSMLSGSTGIR-SYSSCCHGELGMGTSMSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQPAAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLNIKKIIDSLIVSASDDIDDPD---LLEEAVDLAQEAQALFTNFDASVYTIIFIPADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPAKKANLPKFLFKERSVLMEEKVSIS 898
+MRS C VV L L + G G G P + G++ +GST S + C + SM SSRGE+ K+VLGG LG A FSP ++ A A L+EL A++M+ KEVF+PTLQYLKAEQFDAARTNTNYI R N+KK IDS IV ASD +DDPD +E+A D+AQE +ALFTNFD+SVYTIIFIPADA GVLPPGAEKYLKQAYGFYDDINK+LDFYI+LVP + + A KLLPAK+A LP FLFKE+S LM+EKV+IS
Sbjct: 1 MMRS-CDVVGMLMLVMGAQGFAGPGFLPG--------LCLGNAESAAGSTSAAASVAGRCPARQHVLPSMLLAGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS 270
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Match:
D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)
HSP 1 Score: 280 bits (716), Expect = 2.040e-81
Identity = 160/273 (58.61%), Postives = 191/273 (69.96%), Query Frame = 2
Query: 74 IMRSPCKVVVCLALSISGAGGFGLGLAPSRSSNVVNVVQQGSSSMLSGSTGIRSYSSCCHGELGMGTSMSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQPAAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLNIKKIIDSLIVSASDDIDDPDLLEEAVDLAQEAQALFTNFDASVYTIIFIPADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPAKKANLPKFLFKERSVLMEEKVS 892
+MRS C VV L L + G G G P V S+ +S S S + C + SMS SSRGE+ K+VLGG LG A FSP ++ A A L+EL A++M+ KEVF+PTLQYLKAEQFDAARTNTNYI R N+KK IDS IV ASD ++DPD +E+A D+AQE +ALFTNFD+SVYTIIFIPADA GVLPPGAEKYLKQAYGFYDDINK+LDFYI+LVP + + A KLLPAK+A LP FLFKE+S LM+EK +
Sbjct: 1 MMRSWCDVVGMLMLVMGAQGFAGPGFLPG-----VRPGHAESAGAVSTSAAA-SVAGRCPAPQRVLPSMSLAGSSRGEYVKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKEKSTLMKEKCA 267
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Match:
A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA)
HSP 1 Score: 152 bits (385), Expect = 3.180e-39
Identity = 89/199 (44.72%), Postives = 115/199 (57.79%), Query Frame = 2
Query: 278 MSDGPSSRGEFTKSVLGGVVLGCAAIFSPGWTQP----AAAVGTGLQELAAELMLAKEVFRPTLQYLKAEQFDAARTNTNYIMRQLNIKKIIDSLIVSASDDIDDPDLLEEAVDLAQEAQALFTNFDASVYTIIFIPADASGVLPPGAEKYLKQAYGFYDDINKLLDFYINLVPADAREGANKLLPAKKANLPKFLFKE 862
M + SR FT SV VLG AA WT P AAA ++ A LM+ K V P+ +Y K QFD+ARTN NYI RQL ++K I +I+ DD L+EEA DLA A + F+N+D+S+YT+IFIP G LP G++KY QA +YD +LD +I+L P D RE A A+ LP+FLFKE
Sbjct: 1 MGEASVSRRSFTSSV----VLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKE 195
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig953.17254.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 3
0 1 Expect = 5.13e-86 / Id = 58.42 Expect = 2.04e-81 / Id = 58.61 Expect = 3.18e-39 / Id = 44.72 Sequence A0A6H5JS60_9PHAE D7FL66_ECTSI A0A835YWX6_9STRA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 282.3 Seed ortholog evalue 2.4e-73 Seed eggNOG ortholog 2880.D7FL66 KEGG ko ko:K15280 KEGG TC 2.A.7 Hectar predicted targeting category chloroplast EggNOG free text desc. UDP-glucose transmembrane transport EggNOG OGs COG0697@1,KOG1443@2759 COG Functional cat. EG Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko02000 Exons 5 Model size 1870 Cds size 825 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig953.17254.1
>prot_H-paniculata_contig953.17254.1 ID=prot_H-paniculata_contig953.17254.1|Name=mRNA_H-paniculata_contig953.17254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MRSPCKVVVCLALSISGAGGFGLGLAPSRSSNVVNVVQQGSSSMLSGSTG back to top mRNA from alignment at H-paniculata_contig953:4242..9574-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig953.17254.1 ID=mRNA_H-paniculata_contig953.17254.1|Name=mRNA_H-paniculata_contig953.17254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5333bp|location=Sequence derived from alignment at H-paniculata_contig953:4242..9574- (Halopteris paniculata Hal_grac_a_UBK monoicous)CGACGGGTAGTACTAGATTTCCATAGGCAGCGTTACATACATATTGCACT
CCTCGGACACTGTGTTGTAGGGTATT ATGCGAAGCCCTTGCAAGGTCGTT
GTGTGCCTCGCTCTTTCCATCAGTGGGGCCGGAGGCTTCGGGCTTGGCCT
TGCGCCAAGCAGGAGTTCGAATGTTGTCAACGTTGTACAACAAGGATCCA
GCAGCATGTTGTCAGGGTCAACTGGAATACGCAGTTACAGCAGCTGTTGT
CACGGCGAACTGGGCATGGGTACCTCCATGTCAGATG GTGAGTGATGTCG
TGGGTTTGAGCGAAAGATTTTTCGTGTGATAGTGATGCTAGATCGCTGTG
GGCCGAGTTGAACTCCCTTCGTGTGTCATTGCTTCATTTCCTGTTTTCAT
GCTTGCAAGCATTGAGCATGTCGAGTTGTGTCTGACTGTACTGACTCTTG
AGCGTTACTGATGAATTGTATTGTATTTGTGCTGAAAATGACCAGGACTC
TTTCGTACACATCTCACCTGTAAGCAGCAAGCAATTTGTGTTCGTGTGCC
CACCCATGTTATGGAGCTACGCAGCGTTACCGACTAGTAATGCTCTAACG
GTTGCTACTCTTTTTTTATTCACTATCTACAAGTAATAGTAGCGACTGAA
CGAGTGCATTTGACACTTCTTCCAAGCATAGTGGTAACATGAAGGGTCAC
ATCACTTGATGGTCATGTCAAATCCTGTGGCCGAAACCGTGTGTAACTAA
CTGCATGATGACCAGATTTTTTTTCTGGACCTGTTGAATATAGTTGGAAG
TGCTGATTCTCTGGGTGAACAAGGCCATGTATCGACACCTGCATTTTGAA
TTTGACATACCCCACGTACACACATGCGTGGGCAATGGGGTACAACAAAT
CTTCGAGACAAAAAACAAGCATGAAGCGTGGCGAGTTGGTCGACTGAGTA
TCATTTTTGTCGGTTGTTCGACGCATCACTTGGCATCCGTCGTTTTTGTT
GGTATCACATCGTAAGACGTCACAACGTCTGTGAACCGAACTCGTACGAA
TATAGTATATGCCGTGCCTTTGGATACAGGCCCAATGACGAGCTCGATGC
AGCTCGCTGAAGCACCGCTACACAAACTGTTCAACCCGAATTTGTGGATG
ACGACGATACCCATTTCTATATCCCGAGTTACTATTGGCTCAAGTTTTAT
CCTGGCCCTGACGCCGGACTAAAAACCGTTTCACCGAAACTAATTCGTAT
ACCAGTATAGTGGTGTACCGTCTCTGTTTCGGATTTGCAGTCTCCGCTGA
AAGCGATTTTAACTGTTCGAGCCTAGCGAGAGAAGCTTACAGTGGTAACA
TTCGAGTGTGCCGTATTCAGCGCAGAATTGACTAAAAAAATCCACCGACA
GTTGTTTCAGCTGTCGTTGGAGCATTGCGGAAGAATTTAGCGGAGATCTT
GGACCGTCTCATATCTTTTGCCGGTGCTCGTGGCAGGACCAAGCTCGCGC
GGCGAATTCACGAAGAGCGTACTAGGAGGAGTAGTGTTAGGATGTGCGGC
TATATTTTCGCCCGGGTGGACGCAGCCAGCAGCTGCCGTGGGAACGGGTC
TGCAGGAGCTCGCGGCAGAACTCATGCTCGCCAAG GTGATGACGTTACGA
CGATAATTTGAGCTCTATTTTTCCCCGAGTGTTTACTGATACTTCGCCTG
CGACGGTCGGTATCGAGAAACAAACGCGCATCACACGGACGAGAACAATC
ACAGACGGTGTTGTCGATACATTGGGCCGTCTGATTATATTCGCGATCAG
CATTTGAACGATATAATAGTATCACTTGTTTTCCGTTTTTTTCCGATATG
AACTGATGAAGATGTATCGAACTTGCAAGGTAATCGGCAGACATAGTCTG
AAGCACTCTAAATGTAGGTAGTTCTTCTGCTCATGAATCTCACCTACTAT
GACGTGTCATCATCCAGTGATCGATGAATTGATCTGCCCGAGGTCTGAGG
GAAGTCATCGATAAGCAACCCATCATGTCTCCAAAATCAGTACAACATCT
ATCCTGCAACCAAAAATGTCGTCTCTATCTTCGCTCAAAATATCCCCCAC
GACGCGCGCAGCGACCTTCTTTTGTATATCTCACTGTCGTGCTTTGTACC
TTTTAATGTTGTCCCGCTGTTCGTTGTACCGGACACACAAGTGCAGGAGG
TGTTCAGGCCGACGTTGCAGTACTTGAAGGCAGAGCAGTTCGATGCAGCC
CGGACAAATACCAACTACATAATGCGCCAGCTCAACATCAAGAAAATCAT
TGATTCTCTCATCGTTTCGGCAAGCGATGATATCGACGACCCTGATTTG G
TGAGCTTACTAGCCATAGGGCACTTCTCTGAAAACTTAGTTCTGGGCTTG
TGTCGAGGGGGAAACGTGGAGGGGCGAGGTGATGGACTTATTGTTGACAA
AATTTGTTACGATGATCCAGTGGTGAGACTTCAGATTTCCGCCGCCGCTA
AACCCATGGCATATATGCTGGTGAGTATGCCAATACTCTGATTTACACAC
CAACCAAGCTCCTAGCTTTTCACAGGAGCGCCGCCTATATTTTTCTAGTT
GTCTTGGTGGAGCCACTGGGAAGGCTTTGTAGCATGCACTATGAGGGCAT
CCTCTGGGCGCAAAGAACGACGACTAAGTACTACGACAGTTGGTCTAATC
ATGATAGTCGTATATACGGTGCAACGATCTATCCGCGATGAGTAATTATC
TCCAAATGGCTCGACTGTATTGTAACGTTCGATTGTCCTCACTTTGTCTG
ATGAAAATTGCCTTTATCGCCGTGCACGTGTGCGGCGTATCGTAGCTGGA
GGAGGCGGTAGACCTCGCCCAGGAGGCGCAAGCGCTGTTCACGAACTTTG
ATGCCTCGGTGTACACCATCATTTTCATCCCCGCTGACGCCAGCGGCGTG
CTACCGCCGGGCGCGGAAAAATACCTCAAGCAG GTAACCAACGTTCCAAT
GTCCAATATGCCCGTTTGTGAACAGAGACTAGCAATACCCGTTTGAAGTT
TTGAACTGAAAGGGACTTACCGCGTTAAGGCCGGCTGCCAACACAAGTTC
AGTGCTCGTTTTGTTCATGGTCATGGCTAATAGCTCTAGTGTCGACGTGT
GCAAAGGCCTTCAGGTAGACTTGGAAATGGCGTATTCAACTGATATAACG
GACTAAGAACTTCGTACCTTCTATGCACCCGCTCGACTGGCGTTATTCTG
TGTTGTAGTTTGTCCTTCACGGCTGCCAGCACGTTTAGGTAGACTCCATC
TTTTATTATCACGATTTGTTGTCGTGCGCTTGCAAATCATTTCATTTTTC
GTTGTGGGTTATGGGTTTAGGGTTAGGGTTAGGGCTAGGACAACGTTTCA
ATTACTGTACCCTAAGTTTTGACTCTTTAGTGAGGCACACTGAAAGTAAG
ATTTTGCCGTACTTCTCCTGTCGAGAGTAAGGCCATGGCCAGCAGGAGTC
ATATCTATTGACTGCTTCGTCAGGCGAAAACGTCAAAGGCTCGAGTGCGT
CCCTACGTGAACTGAGGTTTCCTAGGTCTTGTGTAGAATATACGAAAAAA
CGAGCTGATTGATCGTGGGGACAGCCTCTCACAAAGAAAATCCACTGGTC
CACCAAAAATGTCATACAATATAATGTACTCGTGAATCTTCCACGTCAAA
ATCCTGATAATCTTCATTTTTTGTACTGCCGCATTAGACCGCATTGACAG
TACTAGGAACCACGACAATGAATTGACATTCCGCGAAACCCCTTGCATTT
GTTTTGGGTTTAGGGGGTGGTACACTGCAGCTGCGAATTGCCGAAAGTCT
CTTCTAATAGAGGCGTGGTGTATGGCGTATTTTGATTTACGTGTGGACTG
GTGTTGCCACAGGGGACTTCTATCATCTGACCGCGAGTCTGCGTGATCGC
GCTAAAGCGCTGAACAAAAATTACCAGGAAAAAATAAATAAGTAAATAGG
CCAGTGTCGGTATACGAGAAGTGATGATCGTCTGGCGGGGGTGAGGGTAA
AATGGGCTAATTATTTGGTGTATTATACAGGAACAACGTAGGCTGTTCAC
CCGCTTAGCCCCATGACAGTATACGATGTTTTACTATCACTATCCTCGAT
ATCCCGCGCCACTTTGCTCGACTGCCTCCCCCATCGCAAGGCGTATGGAT
TTTACGACGACATCAATAAATTGCTGGACTTCTATATCAACTTGGTACCG
GCGGACGCGCGGGAGGGGGCGAATAAGCTGTTGCCGGCGAAAAAAGCTAA
TTTGCCCAAGTTTCTCTTCAAGGAACGCTCTGTCCTCATGGAGGAGAAGG
TCTCCATTAGCTAA TAACGACGATAGATATGTGCACCGCGATGGTGTAGT
AGGTATGCTAGCTTTTCTTGCTAGTGGGTGTTCACCGTAAGCTAATTTGT
AGCTATGAACGACTTACGGGGATGAGTTCTTGCGGCAATATAGAAATCAG
CGGATACAGTAGGTCATCGGGAGAACTATATGATCTGCAGTAAGTAATGC
TAGCTTTAGTTGGGGTTTTTTCGTATGGATTCGGTCTCTCCGGGTTCCTG
TCAACGTCTTTTAGATCTCTCTGACCCGCGGTCATAGGGTAGGTGTTCCG
AAGAATGCTACATCACATCTACACAGAAATCCTTAACGTCATAGGTCGCT
CCCCTGGCAGCAGGTATGCCCACCTCAGTGGTTGTTCGATTGTGGAACAT
GACATTTTATATTGAAATGATAACAAATCTGGCACAGCGATGAGGCGTGT
ATTTGAACCCAGAAAAGGGTGTGCTAGGCGCTAAACATTATTGGCACCGA
CGTTTAATTGGTGATTGATAGATCAGAAGCACTATATATCTTCCTTGCAC
TTCATTAGGGGAATATACAGGAAAGGTGGTTGGCAGCAAACTCTCGACCT
GGATGTTTTTGCTCGTATTTTCGTTAAAAGTAATGCCTCGCGATGTCTAT
TGTCTACTAGCTGTTCGGTGCACACGTGGCTAGAGGGTACGTTGTGAGTA
CTTTGTTGCAGATATTACAACGTCCCACGTTGCGGTGAGGTTGATAAGTG
CGTAAAACGTATTAGGACGTCGTTGTATGTACATTGTCAACTTAACCACA
ACGTCCTGATACGTTGTGCAAACACTGCCAGCCTTACCACAGCGTGGACG
TTGCAATATTCGCAACAAGCTACTCTCTGGCCACATGTGCGCTTACGTTG
TATATGCACACACACAACGGTGGTGCGCTTTGCTGGGCTCCTTGAAGATA
TTGCGCCGTGCACGGTTCGCAACGAATATAATC back to top Coding sequence (CDS) from alignment at H-paniculata_contig953:4242..9574-
>mRNA_H-paniculata_contig953.17254.1 ID=mRNA_H-paniculata_contig953.17254.1|Name=mRNA_H-paniculata_contig953.17254.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig953:4242..9574- (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top