mRNA_H-paniculata_contig9514.17246.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: D7FPE3_ECTSI (Set and mynd domain containing n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE3_ECTSI) HSP 1 Score: 189 bits (479), Expect = 8.280e-48 Identity = 123/331 (37.16%), Postives = 170/331 (51.36%), Query Frame = 1 Query: 595 QLDARFVVRRDPLRPKRGRGVFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTNQRPQKDGGKVLTIMCDGCNARLC-EECYARPGVQDSARAKVHADTCQFTKSVAAAHI--------AAHVDSELLVLVADCLARRKRGLIDDQEWAAINGLESSEIGMAGGVKDLLGERDLRAVRERMEELLPTLGIILESDIQTIYSRMSRNTHPFHNQDPV--FISPNATGLFPTAALVNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLAD-RRDLLKAAWGFRCECSRCIEETMTYSRPKLSPAD 1551
QLD RF VRR+P RPKRGRG+FAV VPAGTEV+ + A + +Y C C T K L I C C R C +EC V +A H TC + + + AA ++++L L +C++RR GL D++EW I+ L E GG G + +RE L + +IQT++ R+ RN H +P+ + P G+FP A+LVNHSC+PNACFHS R G +E LR +V+AGEEVC+SY++H A + RR+LL+ WGF C+C RC ++T +P S D
Sbjct: 118 QLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVAKQAAALPRDRYRPAFCRRCLTLL------DKSLLIKCRRCEDRFCGKEC-----VIAAAGEGTHEVTCGLVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDLVLPED-EGGGEGSGGGTLEPDVIREAQARLNDGGLEVSAEEIQTVHRRLRRNFHTVQ-PEPLGRLLPPTVVGVFPAASLVNHSCEPNACFHS-----RRAGPEGPPLELALRCTTDVSAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCEDDT----KPGASSGD 426
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.330e-40 Identity = 130/357 (36.41%), Postives = 178/357 (49.86%), Query Frame = 1 Query: 598 LDARFVVRRDPLRPKRGRGVFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTNQRPQKDGGKVLTIMCDGCNARLCEECYARP------GVQDSARAKVHADTCQFTKSV-AAAHIAAHVDSELLVLVADCLARRKRGLIDDQEWAAINGLESSEIGMAGGVKDLLGERDLRAVRERMEELLPTLGIILESDIQTIYSRMSRNTHPFHNQDPVFISPNAT--------GLFPTAALVNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISH-PASKVLADRRDLLKAAWGFRCECSRCIEETMTYSRPKL--SPADEQAI-ILER--KVSHYGEKLN 1605
LDAR VR D PKRGRG+FA+ +PAGTEVMRV A A + C+ C P G + C G C C GV +SA TC+ TK + + +D + L L AD RRK GL DD EW +N LES + A + L +L + L+ T I + D+Q +Y R++RN H +SPN + GLFP ALVNHSC PN FH S G+ ++ VLR++R + AG+E+C SY+S A +++RRDLL WGFRC C+RC+ E R + +P DE+A+ +LER ++S G++ N
Sbjct: 34 LDARVEVRFD---PKRGRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLL---PTDTVGSLEA--CHGFPLSFCAACKKATTVGGVSGVHNSA-------TCELTKELNTICATSGGIDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHD-NEAHTMS--LAPAELHKCTRLFKTLVDTN--ISDEDVQAMYRRITRNAHT--------VSPNTSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVTESSSPEGRPVVKQ--VLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMG-WGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERLAQISALGQREN 359
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A6H5KH60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH60_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 6.090e-17 Identity = 60/158 (37.97%), Postives = 80/158 (50.63%), Query Frame = 1 Query: 595 QLDARFVVRRDPLRPKRGRGVFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTNQRPQKDGGKVLTIMCDGCNARLC-EECYARPGVQDSARAKVHADTCQFTKSVAAAHI--------AAHVDSELLVLVADCLARRKRGLIDDQEWAAINGL 1041
QLD RF VRR+P RPKRGRG+FAV VPAGTEV+ R A + +Y C C T K L I C C R C +EC V +A H TC + + + AA ++++L L +C++RR GL D++EW I+ L
Sbjct: 119 QLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVARQAAALPRDRYRPAFCRRCLTLL------DKSLLIKCRRCEDRFCGKEC-----VIAAAGEGTHEVTCGMVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDL 265
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A8J5XG36_DIALT (MYND-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG36_DIALT) HSP 1 Score: 84.3 bits (207), Expect = 3.950e-13 Identity = 99/350 (28.29%), Postives = 137/350 (39.14%), Query Frame = 1 Query: 646 GRGVFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTNQRPQKDGGKVLTIMCDGCN-ARLCEECYARPGVQDSARAKV-HADTCQF---------TKSVAAAHIAAHVDSELLVLVADCLARRKRGLIDDQEWAAINGLESSEIGMAGGVKDLLGERDLRAVRERMEELLPTLGIILESDIQTIYSRMSRNTHPFHNQDPVFISPNATGLFPTAALVNHSCDPN--ACF-------------------------------HSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRCIEETMTYSRPKLSPADEQAI 1563
GR + A AG V+R A+A + T+CA C RP G ++ C GC A C E + R A AK+ HA C+ T+S+ A I AH + A A L+ Q G D + D+RAV + LL G+ + + ++R H+ + P GLFP AAL NHSCDP+ A F H+T A G + VLR +R +A GE V +SYI A A+R + L+AA+GFRC C+RC E +R + A E A+
Sbjct: 126 GRQLVAARPFRAGEVVLRAAPAAIALDVECASTLCATCL---RPPSAGAELRR--CSGCQLAHYCSEAHQR-----IAWAKLGHAAECRLIQASRPRVPTRSMRLAAIGAHGACKPTATAAAAAACATPALLSLQP--------------RDGSADR-SDGDVRAVALLLARLLHAAGVQHAPKPDLLAALLARLRANAHSLTDGQLQPIGAGLFPLAALSNHSCDPSTSATFEFVRPEPAMPPPSRAGADADARADAPRADAAHATRARPAGRGALPC---LVLRALRPLAPGEAVTVSYIDLAADA--AERAETLRAAFGFRCRCARCALEPRDGARRPSAWAHEAAL 445
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: W4HAK0_9STRA (SET domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAK0_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 3.030e-12 Identity = 85/301 (28.24%), Postives = 125/301 (41.53%), Query Frame = 1 Query: 637 PKRGRG--VFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTNQRPQKDGGKVLTIMCDGCN-ARLCEE-CYARPGVQDSARAKVHADTCQFTKSVAAAHIAAHVDSELLVLVADCLARRKRGLIDDQEWAAINGLESSEIGMAGGVKDLLGERDLRAVRERMEELL---PTLGIILESDIQTIYSRMSRNTHPFHNQDPVFISPNATGLFPTAALVNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRCIEETM 1518
P +GR V + G+P+GT++ + A A Y VCA C P I CD C+ C E C A + A VHA C+ + + D +LL L+ L RR E + SE+ L + +V E LL PT + + I + R++ N++ + A G+FP AAL+NHSC PN + N+G+ +E+ RT VA GEE+C SYI P +R+LL F+C C RC + ++
Sbjct: 17 PDKGRSLHVSSPRGIPSGTKLFQEEAFAKVVLSTYKGNVCAACLRPSDPD--------ICCDDCSQVTFCSEACQA-------SLAYVHALECETLDDIDMIAKKSAADRDLLRLLVRILCRRVCPCPRRYETDELLATTFSEVDQMVHATSRLESSWVASVERGAELLLQSLPTKAHVSVAKIVGLAGRINENSYSLDAWTSSKAA--AVGMFPVAALLNHSCMPNCAW-------ANDGRGHMEV----RTTAFVAHGEELCFSYID-PTQPRPTRQRELLVTKH-FQCTCPRCSDSSI 287
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A0G2I9J1_9PEZI (SET domain-containing protein n=1 Tax=Diaporthe ampelina TaxID=1214573 RepID=A0A0G2I9J1_9PEZI) HSP 1 Score: 81.3 bits (199), Expect = 3.730e-12 Identity = 87/337 (25.82%), Postives = 132/337 (39.17%), Query Frame = 1 Query: 637 PKRGRGVFAVHGVPAGTEVMRVRAVAVAAKFK-YHLTVCAYCFTNQR----PQKDGGKVLTIMCDGC----NARLCEECY-----------------------ARPG---VQDSARA------------KVHADTCQFTKSVAAAHIAAHVDSELLVLVADCLARRKRGLIDDQEWAAINGLESSEIGMAGGVKDLLGERDLRAVRERMEELLPTLGIILESD-IQTIYSRMSRNTHPFHNQDPVFISPNATGLFPTAALVNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRC 1503
P GRGVFA + GTEV ++ F+ Y VC CF+ R P +D L +GC N R EC RPG ++ RA + H + VAA+ A ++++ + + R +D +W AI LE + DL +R + + L L I ++ + T+ R RN+ + D G++P+A+ NH+CDPN + G+ +V R R++AAGEE+C+SY+ + +R LLK WGF C C RC
Sbjct: 19 PGAGRGVFATKNIARGTEVHVADDLSAHVLFREYRNEVCWQCFSYDRGRKLPIRDPDHGLAFCSEGCQRKWNGRHDRECLQAWRQLEIQVKKSGSNTDEFAGAVRPGPAEIESKWRAAEQTVKQLRGAPQQHRSKKELAGLVAASADAGRFSADVVSFQLNAVLARH---MDPGQWPAILALEEDTRPYSSAT-DL--DRHIASYCFLALALPEELARIASAEMLGTVKGREVRNSFGIRSLDDEGCEFFGWGVWPSASYFNHNCDPNT-------DKERVGRT-----WVFRAKRDIAAGEEICISYLGKDMGILREERTALLKKTWGFDCICQRC 337
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A485L9N4_9STRA (Aste57867_18144 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9N4_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.180e-11 Identity = 82/303 (27.06%), Postives = 125/303 (41.25%), Query Frame = 1 Query: 616 VRRDPLRPKRGRGVFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTNQRPQKDGGKVLTIMCDGCN-ARLCEECYARPGVQDSARAKVHADTCQFTKSVAAAHIAAHVDSELLVLVADCLARRKRGLIDDQEWAAINGLES-SEIGMAGGVKDLLGERDLRAVRERMEELL---PTLGIILESDIQTIYSRMSRNTHPFHNQDPVFISPNATGLFPTAALVNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRCIE 1509
++RDP++ R V A G+ AGT + + +A A + VCA C + P I CD C+ C + V +A VH C + + + D +LL L+A L RR + + +++ L L VR LL P+ + D+ + +R++ N++ V GLFP AAL+NHSC PN I +G++E+ RT R V AG+E+C SYI +V R+ L+A F C C RC +
Sbjct: 12 LQRDPIKG-RSLHVVAPDGLRAGTVLFQEQAFASVVLSAFKGAVCAVCLKDADPD--------ICCDDCSQVTFCSD------VCQAALDDVHQLECATLEDIDLFAKKSSADKDLLRLLARTLCRRVSPSSXXXXXXXTTVVPTFAQVDAMVHAASQLAPEWLACVRHGATLLLASLPSACRVSVDDVVELAARINENSYSLDAWTSVPHPAVCVGLFPLAALLNHSCAPNC-----IWAHGGDGRMEV------RTTRFVPAGDELCFSYIDTHVPRV--SRQATLRATKHFDCRCRRCAD 286
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A6S8HJF2_DUNTE (Hypothetical protein n=3 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A6S8HJF2_DUNTE) HSP 1 Score: 77.8 bits (190), Expect = 3.550e-11 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 1249 GLFPTAALVNHSCDPNAC--FHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRCIEE 1512
G++P AL+NHSC PNAC R +G+ + + V+R R ++AGEEV ++Y AS L RR L+AA+GFRC+C RC+ E
Sbjct: 223 GIWPAHALLNHSCSPNACTLVVGGTGGDRADGEDDRAWKMVVRAARSISAGEEVTITYAGAHASSPLPVRRAALQAAFGFRCDCDRCLVE 312
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A2P6NT33_9EUKA (NADPH:quinone reductase-like protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NT33_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 5.160e-11 Identity = 79/310 (25.48%), Postives = 123/310 (39.68%), Query Frame = 1 Query: 640 KRGRGVFAVHGVPAGTEVMRVRAVAVAAKFKYHLTVCAYCFTN-----QRPQKDGGKVLTIMCDGCNA-RLCEECYARPGVQDSARAKVHADT--CQFTKSVAAAHIAAHVDSELLVLVADCL---ARRKRGLIDDQEWAAINGLESSEIGMAGGVKDLLGERDLRAVRERMEELLPTLGII-----------LESDIQTIYSRMSRNTHPFHNQDPVFISPNATGLFPTAALVNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRC 1503
++GR A + +G EV+RV A A + +Y C+ CF P+ G K + C C C EC + V +H ++ CQ K H+ S +L+ + + + L+ + A L + G V L D A ++ +P + +I E ++ I S + N H P+ + GL+PTAA+ NHSC PN F N G + R + +V G E+C SYI A+R+ L++ +GF C CSRC
Sbjct: 1139 EKGRHFVAARNIKSGEEVLRVAPSAAALRIEYLHEYCSGCFRPLPLIPSIPKNKGSK--HVNCRNCKRITFCRECAKKELV-------IHEESGECQLLKMDFQDDPLIHMFSRILLRLLHLSRTGSNEVKNLVKETTGPAKTPLNHAICDTWGDVLSLQPGIDTEARKQSSSLTVPVMALIGNAGDLKFELPAEEIMENIVSILLTNGHEISYPRPLGV-----GLYPTAAVFNHSCLPNVAFSHD-----NQGAISF------RALSDVEKGTELCSSYID--IILPTAERQITLRSRYGFDCHCSRC 1421
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Match: A0A8H3BYU7_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3BYU7_9AGAM) HSP 1 Score: 73.9 bits (180), Expect = 2.950e-10 Identity = 54/148 (36.49%), Postives = 74/148 (50.00%), Query Frame = 1 Query: 1123 EELLPTLGIILESDIQTIYSRMSRNTHPFHNQDPVFISPNATGLFPTAAL-VNHSCDPNACFHSTIAESRNNGQVEIEIEFVLRTMREVAAGEEVCLSYISHPASKVLADRRDLLKAAWGFRCECSRCIEETMTYSRPKLSPADEQAI 1563
E L+ L S + SR N H+ V P A G+F TA+ NHSC PNA + E NG ++ V++ + +VA GEE+C+SY + PAS + RRD L+ A+GF C+C RC+ T S SP E I
Sbjct: 160 ENLISPLSFTSSSVLSAAASRFGNNNFVIHDARLV---PYAHGVFATASRSFNHSCRPNAV---AMFEETENG-----VQMVIKLVEDVAIGEEICISY-TDPASPD-SKRRDALQHAYGFLCQCPRCVTGT---SAAPPSPGHEPFI 291 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9514.17246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9514.17246.1 >prot_H-paniculata_contig9514.17246.1 ID=prot_H-paniculata_contig9514.17246.1|Name=mRNA_H-paniculata_contig9514.17246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=645bp MVSFRPGCVVVHRPTECLFRVLQWTAEDAVMLLQPLMLADDNQNSKGEPMback to top mRNA from alignment at H-paniculata_contig9514:2998..8079- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9514.17246.1 ID=mRNA_H-paniculata_contig9514.17246.1|Name=mRNA_H-paniculata_contig9514.17246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5082bp|location=Sequence derived from alignment at H-paniculata_contig9514:2998..8079- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9514:2998..8079- >mRNA_H-paniculata_contig9514.17246.1 ID=mRNA_H-paniculata_contig9514.17246.1|Name=mRNA_H-paniculata_contig9514.17246.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3870bp|location=Sequence derived from alignment at H-paniculata_contig9514:2998..8079- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |