mRNA_H-paniculata_contig950.17241.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A6H5L0Q6_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q6_9PHAE) HSP 1 Score: 390 bits (1003), Expect = 1.560e-122 Identity = 196/295 (66.44%), Postives = 233/295 (78.98%), Query Frame = 1 Query: 220 AGSHVVRETGRISSAVSKSSP-TLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSPSRVPMPS--AVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPLEHGHEKFHWIAPTTAVQ 1095
AGS V R G A SP +L WL++GP+VLSM+PGFFGFYAH GALIAL++EGLL VS+ATGASAG LVAGLFA+GLSP DMG+TVVKF+RSDFWDP+G GG LRG KF+ I++ TLP GV RFDQ ++PLAVSAFDVS L RT+ EG +A ALRA+CTFP LFSPVWH +GVL+DGGVRDTTGMWCVP +R+DCRR+LNVTFG+++ +GVCV PS P S A G+EIVSL L GLPRPHPFAMERG A+EAA+ +V++ +G PL GH + HWIA TTA Q
Sbjct: 161 AGSVVSRGGGTSDGAGVLESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGDTVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPGGVRRFDQGRIPLAVSAFDVSRLTTRTLDEGCIAQALRATCTFPGLFSPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFGSRNGRGVCVPPSSFPTASNPRPAPDGMEIVSLPLTGLPRPHPFAMERGVDAMEAARNQVAAAIGEPLLKGHGRSHWIAATTATQ 455
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: D8LEM2_ECTSI (Patatin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM2_ECTSI) HSP 1 Score: 377 bits (968), Expect = 1.160e-118 Identity = 185/279 (66.31%), Postives = 224/279 (80.29%), Query Frame = 1 Query: 265 VSKSSPTLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSPSRVPMPS--AVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPLEHGHEKFHWIAPTTAVQ 1095
V +S +L WL++GP+VLSM+PGFFGFYAH GALIAL++EGLL VS+ATGASAG LVAGLFA+GLSP DMGETVVKF+RSDFWDP+G GG LRG KF+ I++ TLP+ V RFDQ ++PLAVSAFDVS L RT+ EG +A ALRA+CTFP LF+PVWH +GVL+DGGVRDTTGMWCVP +R+DCRR+LNVTFG+++ +GVCV PS P S A G+EIVSL L GL HPFAMERG A+EAA+ +V++ +G PL GH + HWIA TTA Q
Sbjct: 29 VVESPRSLSAWLKEGPFVLSMSPGFFGFYAHIGALIALDNEGLLNEVSFATGASAGGLVAGLFAAGLSPTDMGETVVKFRRSDFWDPVGFGGLLRGKKFEDIVKGTLPDDVRRFDQGRIPLAVSAFDVSRLMTRTLDEGCIAQALRATCTFPGLFAPVWHDRGVLVDGGVRDTTGMWCVPEERQDCRRILNVTFGSRNGRGVCVPPSSFPTASNPRPAPDGMEIVSLPLAGLXXXHPFAMERGVDAMEAARDQVAAAIGEPLLKGHGRSHWIAATTATQ 307
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A835YR40_9STRA (Phospholipase A(2) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR40_9STRA) HSP 1 Score: 283 bits (724), Expect = 4.680e-78 Identity = 145/257 (56.42%), Postives = 185/257 (71.98%), Query Frame = 1 Query: 280 PTLEEWL-RQGPYVLSMAPGFFGFYAHTGALIALEDEGLLE-RVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSPSRVPM-----PSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAA---KRKV 1020
P+L +WL +Q Y L +APGFFGFYAH G L AL++ GLLE +VS+ +GASAGALV GL+A+GL+P +M + VV ++R DFWDP GVG LRG F+G+I +LPEGVT FDQC++PL V+ + +S R I EG++A ALRASCTFP+LF PVWH QGVL+DGGV DT GMW +P++ +D R +LN+TFG V PS P P + GR EIVS A+ G+PRPHPFAM +GAAA+EAA KR+V
Sbjct: 26 PSLAQWLAQQSKYALGLAPGFFGFYAHIGVLKALDEAGLLEGKVSFVSGASAGALVGGLYAAGLTPSEMAQRVVAYQRGDFWDPPGVGAMLRGRAFEGLIRSSLPEGVTTFDQCRLPLGVTGYSLSRFTTRVIQEGDIALALRASCTFPVLFQPVWHPQGVLMDGGVFDTAGMWSIPSNGDDYRCILNITFGTGPVVDQVVPPSLFPCRSHPRPPSAGGRK-EIVSFAITGVPRPHPFAMHKGAAAIEAAYELKRQV 281
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A4U1J9U9_9DELT (Patatin n=1 Tax=Polyangium fumosum TaxID=889272 RepID=A0A4U1J9U9_9DELT) HSP 1 Score: 180 bits (457), Expect = 4.190e-48 Identity = 108/262 (41.22%), Postives = 148/262 (56.49%), Query Frame = 1 Query: 262 AVSKSSPTLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLE-RVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSPS-RVPMPSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMP 1041
A + +PTL EWLR+GP+ + ++ GFFGF+AH G + LEDEGL RVS G+SAGALV G++A+G S + + +++ KR DFWD G L G F+ +E LP V FD+C+VPLAVS +DV G R + G LAPA++ASCT P LF PVWH L+DGG+ D G+ +P D R+ ++ SPS +VP + +L ++ LPR PF + GA A + A R L P
Sbjct: 10 ASGRPTPTLREWLREGPFSMGLSSGFFGFFAHAGVMTVLEDEGLAPTRVS---GSSAGALVGGIWAAGASAVTIRDELLRLKREDFWDMRLGPGLLAGKLFRARLEALLP--VPTFDRCRVPLAVSVYDVFARGTRVLAGGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPADE----RLFYHHLASRSPWRKADSPSLKVPTRDGMT-------ALVIEALPRVGPFRLPEGARAFDIAARATKDALSRP 255
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A6N7Q127_9DELT (Patatin n=1 Tax=Polyangium spumosum TaxID=889282 RepID=A0A6N7Q127_9DELT) HSP 1 Score: 177 bits (450), Expect = 3.500e-47 Identity = 107/258 (41.47%), Postives = 147/258 (56.98%), Query Frame = 1 Query: 277 SPTLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLE-RVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSPS-RVPMPSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPL 1044
+PTL EWL +GP+ + ++ GFFGF+AH G + LEDEGL RVS G+SAGALV G++A+G S + + +++ KR DFWD G L G F+ +E LP V FD+C+VPLAVS +DV R + EG LAPA++ASCT P LF PVWH L+DGG+ D G+ +P R+L ++ SPS +VP +A +L ++ LPR PF + GA A + A R L P+
Sbjct: 15 TPTLREWLHEGPFSMGLSSGFFGFFAHAGVMTVLEDEGLSPARVS---GSSAGALVGGIWAAGASAVTIRDELLRLKREDFWDMRPGPGLLAGKLFRARLEALLP--VRTFDRCRVPLAVSVYDVFSRKTRVLAEGPLAPAIQASCTVPGLFHPVWHEGRPLLDGGILDRHGLAGMPPGE----RLLYHHLASRSPWRKVNSPSLKVPERGGMA-------ALVIESLPRVGPFRLPEGARAFDIAARATRDALARPV 256
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A850BBZ6_9DELT (Patatin-like phospholipase family protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A850BBZ6_9DELT) HSP 1 Score: 176 bits (447), Expect = 7.770e-47 Identity = 108/270 (40.00%), Postives = 146/270 (54.07%), Query Frame = 1 Query: 277 SPTLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVG-GFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVP----------TDREDCRRVLNVTFGAKDKKGVCVSPSRVPMPSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPLEHG 1053
+PTL EWLR+ P+ L ++ GFFGF+AHTG + LE+EGLL + G+SAGALVAG +A+G+S D+ + ++ KR FWDP G G G LRG F+ + LP FD+C+ P+A+S +DV R +T G L A+ ASC PLLF P W L+DGG+ D G+ +P DR RR KG PS R + SL + GLPR PF +E+GAAA +AA++ L P+ G
Sbjct: 4 APTLREWLRERPFALGLSSGFFGFFAHTGVMTVLEEEGLLP--ARLAGSSAGALVAGAWAAGVSATDLRDELLALKREHFWDP-GFGLGLLRGELFRQKLGALLP--AQTFDECRAPVAISVYDVLQARTRVLTAGRLVHAICASCAVPLLFQPAWVDGRPLLDGGILDRPGITGIPEGDRLFYHHLADRSPWRR-----------KG---------SPSLEIPRRANMTSLVVGGLPRVGPFRLEQGAAAFDAARKAAREALDRPIAEG 248
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A0K1QEA1_9DELT (PNPLA domain-containing protein n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1QEA1_9DELT) HSP 1 Score: 172 bits (435), Expect = 2.640e-45 Identity = 103/257 (40.08%), Postives = 146/257 (56.81%), Query Frame = 1 Query: 283 TLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDK-KGVCVSPSRVPMPSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPLEH 1050
TL E+L +GP+ L+M+ GFFGF+AHTG + LEDEGL+ + A+G+SAGALV L+A+GL + + ++K +R DFWDP G LRG F+GI++ LP F+ C++P+A+S FDV + G+L A+RASC P LF PVW + +DGG+ D G+ +P +RE RVL +K +G+ P R M +L L LPR PF +E G A AA+ L P+E+
Sbjct: 2 TLREYLLEGPFALTMSSGFFGFFAHTGFMTVLEDEGLVP--TRASGSSAGALVGSLWAAGLDAPTIADELLKLERRDFWDPGLGAGVLRGRLFEGILDRVLPRRT--FETCRIPVALSVFDVLTRSTHVLDAGDLPSAIRASCAVPFLFHPVWIRRRPYLDGGILDRPGLLAMP-EREP--RVLFHHLASKSPWRGMLEMPRRPGM-----------TTLVLHDLPRSGPFKLEAGRRAYAAAREATKRALDRPIEN 240
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A356TNY4_9DELT (Patatin n=2 Tax=Myxococcales TaxID=29 RepID=A0A356TNY4_9DELT) HSP 1 Score: 167 bits (424), Expect = 6.800e-44 Identity = 107/250 (42.80%), Postives = 141/250 (56.40%), Query Frame = 1 Query: 325 MAPGFFGFYAHTGALIALEDEGLL-ERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSPSRVPMPSAVA-GRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPLEHGHEKFH 1068
M+ GFFGF+AH G L LE+EGLL ERV+ G+SAGALV G +ASGL R++ + ++ KR DFWDP G LRG F+ +E LP V +C+VP AVS +DV R + +G APAL ASC PL+F PV H+ GVL+DGGVRD G+ T D RVL ++ SP R A+ R +V+L ++ LPR PF + RGA A +AA+ LG + + H
Sbjct: 1 MSSGFFGFFAHCGVLTVLEEEGLLPERVA---GSSAGALVTGAWASGLEARELADELLGLKREDFWDPGPGAGLLRGRLFRRRLERLLP--VRDLSECRVPAAVSVYDVLRREVRVLDDGPAAPALHASCAVPLMFHPVRHAGGVLVDGGVRDRPGL----TGLRDAPRVLFHHLSSR-------SPWRRRDSEALKIPRREGLVTLVIEPLPRVGPFQLHRGADAFDAAREATRRALGRRIRTAEVRVH 234
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A0F6SGK1_9DELT (PNPLA domain-containing protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6SGK1_9DELT) HSP 1 Score: 166 bits (421), Expect = 3.360e-43 Identity = 105/262 (40.08%), Postives = 150/262 (57.25%), Query Frame = 1 Query: 265 VSKSSPTLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLLERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRRVLNVTFGAKDKKGVCVSP-SRVPMPSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPLE 1047
++++ PTL EWL +GP+ L+M+ GFFGF+AHTG L LEDEGL+ S A+G+SAGALVAG +ASG+ +G + +R FWDP G LRG F+ +E LP RF++ +VP+ +S DV+ R I G+LA A+ ASC PL+F PV L+DGGV D G+ VP +RE RVL ++ SP R P+ + +V+L ++ LPR P+ + G A++AA+ L +E
Sbjct: 1 MTRARPTLREWLHEGPFALAMSSGFFGFFAHTGVLSVLEDEGLVP--SRASGSSAGALVAGAWASGVDATTLGRELEALRREHFWDPGLGAGLLRGALFRAKLESMLP--ARRFERARVPITISTHDVAWNRTRVIDAGDLAAAIHASCAVPLMFHPVRVDGRWLVDGGVSDRPGLRGVP-ERE---RVLFHHLASR-------SPWRRKNDPALEVPQRAGLVALVIEDLPRVGPYRLGEGLRAMKAARDATRVALDRVIE 247
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Match: A0A0S8FKL7_9GAMM (PNPLA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FKL7_9GAMM) HSP 1 Score: 166 bits (419), Expect = 7.990e-43 Identity = 101/257 (39.30%), Postives = 140/257 (54.47%), Query Frame = 1 Query: 283 TLEEWLRQGPYVLSMAPGFFGFYAHTGALIALEDEGLL-ERVSYATGASAGALVAGLFASGLSPRDMGETVVKFKRSDFWDPLGVGGFLRGTKFQGIIEDTLPEGVTRFDQCKVPLAVSAFDVSHLGERTITEGNLAPALRASCTFPLLFSPVWHSQGVLIDGGVRDTTGMWCVPTDREDCRR--VLNVTFGAKDKKGVCVSPSRVPMPSAVAGRGLEIVSLALDGLPRPHPFAMERGAAALEAAKRKVSSVLGMPL 1044
TL +WL P+ L M+ GFF F++H G L AL DE L+ E VS G+SAGAL AGL+A+GL P ++ E V ++ DFWDP G LRG +F+ +I P V R + C+ PL VS FD+ + R ++ G+LA AL ASC PL+F P+WH G LIDGG+ D G+ VP R + T+ +D + + P R + +L + LPRP P A+ G +A AA+ L P+
Sbjct: 6 TLRDWLEAEPFTLVMSSGFFSFFSHCGVLAALADESLVPEAVS---GSSAGALTAGLWAAGLEPTEIRELYVSLRKEDFWDPAPGPGLLRGRRFRTLIRRASP--VQRLEHCRRPLTVSVFDLLRMRTRVLSSGDLARALYASCAVPLMFHPLWHQGGWLIDGGLGDRPGLSGVPAGRRVFYHHIMYQSTWRRRDSADLGL-PDRP-----------NLAALTIPALPRPRPDALHVGPSAWAAARTATLRALDRPV 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig950.17241.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig950.17241.1 >prot_H-paniculata_contig950.17241.1 ID=prot_H-paniculata_contig950.17241.1|Name=mRNA_H-paniculata_contig950.17241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=544bp MLTGAGRTKANATTVSRSRNNSKDTDANDGLMVGALPKTRALGAAISGCTback to top mRNA from alignment at H-paniculata_contig950:19766..26536- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig950.17241.1 ID=mRNA_H-paniculata_contig950.17241.1|Name=mRNA_H-paniculata_contig950.17241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6771bp|location=Sequence derived from alignment at H-paniculata_contig950:19766..26536- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig950:19766..26536- >mRNA_H-paniculata_contig950.17241.1 ID=mRNA_H-paniculata_contig950.17241.1|Name=mRNA_H-paniculata_contig950.17241.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3264bp|location=Sequence derived from alignment at H-paniculata_contig950:19766..26536- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |