mRNA_H-paniculata_contig95.17234.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig95.17234.1
Unique NamemRNA_H-paniculata_contig95.17234.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A6H5JST1_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JST1_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 1.360e-151
Identity = 246/431 (57.08%), Postives = 328/431 (76.10%), Query Frame = 3
Query:   96 MVEDEVIMISYCMVTFGLSALLFILRNLLLQDAANSRVSRAEEYVRPVEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQVLQAVEPSCSNPMVVIYHIAPPSAVVMVPMAVLEVIRKGDIASSRITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAKGRPQHGSREVGAEQMKSRQPTLGAGSLNGLEVTNGTGALLPYSAVSQQEVDEELRVFRYTNAEMELEGELEEFSSFTSLG 1388
            MV    +M +YC+VTF  +++LF +++LLL+DA  SR+S+A +YV  VE+AAWVL WYGVSVSM+MANRWLF++W   GF FP++TTM+HMWLKV+V+RV+     C    +P  L  SV  + V+ IGLAT+GDI+LSNLSF  ATV FYTIVKSGSL+WIL+WA+VFRFE L+ +++ VV + S GLFLAS G+TDFS  GL++ILGASC SGLRW L+Q+LQA+EPSC +P++VIYHIAP SA+ M PMA+L+++ + ++  + +T  ++ +VAVVI G GLFSF LIFAEVKLL ++SSLTMGVFGT+KE+VQI +AV +F++++TW+ + GL  A +GS+ YK+++ +P   + E G  +  +R+P   A    G E  N  G  +PYSAVSQQEVDEELRVF+Y N E ELEGELEEFSSF   G
Sbjct:    1 MVAKGDVMGAYCLVTFFGASILFGVKHLLLRDATFSRLSKAADYVPAVEIAAWVLTWYGVSVSMVMANRWLFYEWQGVGFPFPVLTTMVHMWLKVLVTRVMY----CFKGEKPPHLDVSVNLRTVIPIGLATAGDILLSNLSFMVATVAFYTIVKSGSLIWILLWAVVFRFEALTPKMVSVVLITSVGLFLASLGETDFSTEGLLLILGASCLSGLRWGLLQLLQAIEPSCHDPLLVIYHIAPSSAIAMTPMALLDILDE-NLKGAAVTPGSIAQVAVVILGTGLFSFALIFAEVKLLAITSSLTMGVFGTVKEIVQIVLAVLVFNEQVTWFNLVGLGWAIVGSMLYKISRAKPSARNGEGGGVK-DARRPAHNA---QGDEKANA-GVNMPYSAVSQQEVDEELRVFKYENTEWELEGELEEFSSFDGGG 421          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A7S2ANC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANC6_9STRA)

HSP 1 Score: 254 bits (648), Expect = 9.090e-75
Identity = 138/312 (44.23%), Postives = 204/312 (65.38%), Query Frame = 3
Query:  228 VRPVEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTT-LGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQVLQAVEPSCSNPMVVIYHIAPPSAVVM----VPMAVLEVIRKGDIASSRITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAK 1148
            V+  E+AA+ LLW+G SVS  + N+WLF  W+  G  +P++ T +HM LK I+S++ +  CRC    +    L   + +KV++ I L T+GDI LSNLS    TVTFYTI+K+GSL+W+L+WA++FR EK S+++ G+  +I+ GLFL+++G T FS  GL++ILGASC SG+RW LVQVL   +      MVV+YHIAP +A  M    + M   +++     ++  I  T ++ +       G  +F+L+ AEVKL+ ++SSLT+GV GT KE++QI MAV +F D +TWY + GLALA  G+V Y   +
Sbjct:   21 VQSSEIAAFALLWFGTSVSFTIFNKWLFSYWHHDGLPYPLMATSLHMLLKAILSQIFVR-CRCSPFHQTLDPLPMPLLFKVIIPIALCTAGDIALSNLSVQLVTVTFYTIIKAGSLLWVLLWAVIFRLEKPSLRLFGICFLIAGGLFLSTFGDTAFSRIGLVLILGASCASGIRWGLVQVLMGHDNEQFTSMVVVYHIAPWAATFMFLTALGMEAPKMLSDTSFSNEEILLTILLTLV-----GGFAAFLLVLAEVKLIQITSSLTLGVLGTSKELIQIVMAVLVFKDVVTWYNVIGLALAVGGTVIYNYVR 326          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A7S2FM58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FM58_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.880e-66
Identity = 144/356 (40.45%), Postives = 221/356 (62.08%), Query Frame = 3
Query:  114 IMISYCMVTFGLSALLFILRNLLLQDAANSRVSRAEEYVRPVEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVL------YWCRC-QGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQVLQAVEPSCSNPMVVIYHIAPPSAVVMVPMAV----LEVIRKGDIASSRITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAK 1148
            ++I+Y  V F L+ +  +   +L   +     ++A   V+ ++V  +V LW+G+SV+  + N+W    W   GF FPI  T  H+ +K +++R ++      Y+ R  + +P P TL      +V+  IG  T+ D++LSN+SF + TVTFYTIVKS +L+WIL+WA++FR EK +  I   VTVIS GL  ASYG+T+FSM GL++++GAS   GLRWAL+Q L A+E    +P++ +YHIAP S + M+ MAV      +  K ++A  +  + A +E  V+    G+ +F+LI AEVKL+ ++SSLT+GVFGT KE++QI +A+ +F D +T     GL LA  G+ AY   K
Sbjct:    9 VLIAYSCVAFSLAGMSAVGARVLKHQSRYRPQAKAANLVQMMDVGTYVFLWFGISVTFTLLNKWFLTYWRG-GFSFPITGTTGHIAMKALLARGLVDGRCGKYFERTVEPVPLPLTL------QVIFPIGFMTATDVMLSNVSFKFVTVTFYTIVKSSTLVWILLWAVLFRIEKPNWAIAITVTVISLGLGCASYGETNFSMVGLLILIGASASGGLRWALIQRLMALEEMFEDPLIALYHIAPWSFITMLIMAVSIEGTHIFAKENLAQFQ--SQATLEALVLTFIGGIMAFVLIVAEVKLVQLTSSLTLGVFGTCKELIQIMLAIIVFKDTLTVTNTIGLILAVGGTSAYHRIK 355          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: W7TSN0_9STRA (Solute carrier family 35 member c2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSN0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.210e-53
Identity = 146/482 (30.29%), Postives = 231/482 (47.93%), Query Frame = 3
Query:  177 LLLQDAANSRVSRAEE-----YVRPVEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQVL--------------------------------------------------------------------------QAVEPSCSNPMV--VIYHIAPPSAVVMVPMAVLEVIRKGDIASSRITTTAVV-EVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAKGRPQ------------HGSREVGAEQMKSRQPTLGAGSLNGLEVTNGTGALLPYSAVSQQEVDEELRVFRYTNAEM 1340
            LLL   A  R+ R E      ++    +  +VL WY +S+   + N+W+F  W  +GF +P++ T +HM  KV ++R+V    R +   RP  L WS++WK  V IG+ T  DI  SNLSF + +VTFYTI+KSG+++WIL+WA++ R E L+ +I+ +   +S G+ LASYG+T F+ AG +++  A   SGLRWAL Q++                                                                          +A   S  +P    ++YH+ P SA++ V  A L V  K  + S      A++ ++  ++   GL SF+L+  EVKL+ +SSSLTM +FG LKEV+ +A+++ +F D ++   + GL +A LG++ YK  K +              HG RE           T  A S+      +G   L    AV  + +D E+ +F + +AE+
Sbjct:   18 LLLAAEALQRLVRIESHPWHPFLNYARICKYVLSWYMISIGFTLCNKWIFRYWRGSGFPYPLLVTSVHMITKVFLTRLVDRCRRAEHRVRP--LPWSLYWKGPVSIGICTGLDISFSNLSFLFISVTFYTILKSGAILWILVWAVIMRLEPLTWEIVSICAAVSFGVGLASYGETAFNSAGFVLVTLACASSGLRWALTQLMLEGELNGRDDSMYRSALIGQLSSGRSDVDGTGGNADSDCNIQGRSDPRDCGRHRCNTARDPPLVDHAHTPVNGSEAHSVSVQHPQAFEILYHLTPASAIICVA-AFLVVEWKSCVQSHVFKDLALLFQLLAILLVGGLISFLLVLTEVKLVKISSSLTMSMFGALKEVITVAISMVVFHDDVSLLNVFGLFVAILGAICYKRYKEKVSSAGSSNVAFGRNHGGREQLQRCSACLPTTSRASSIEDDSSEDGEEIL---QAVGGRGMDREMEMFNFNHAEL 493          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A8K1CFW6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFW6_PYTOL)

HSP 1 Score: 200 bits (508), Expect = 1.240e-53
Identity = 116/309 (37.54%), Postives = 193/309 (62.46%), Query Frame = 3
Query:  237 VEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQ-VLQAVEPSCSNPMVVIYHIAPPSAVVMVPMAVL----EVIRKGDIASSRITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAK 1148
            V+V+ +++LWYG+S+ M + N+W    W   G+ F    T I+M+ K ++SRVV    RC G  + T L  +++W++ V IG+ TS DI+LSNLSF Y TVTFYTIVKSG  +W L++++    ++ S  +  V+ +ISSG+ LASYG T F + G +++L AS    LRW L Q +L+ ++ S +  + V+Y+I+P SAV ++P+A+     E+++   +  S++   +++ + V    +G  +F LIF E+ L+  +S+L++G+ G+ K+V Q+ +AV IF D ++     GL +AT G + Y   K
Sbjct:   71 VDVSVFIVLWYGISIGMTLFNKWFLRVWADGGYPFATTMTCINMFTKCLLSRVVN---RCSGT-KMTELPRAIYWRLAVPIGICTSLDIMLSNLSFFYITVTFYTIVKSGGNVWNLLFSICLGHQRPSYALFTVILLISSGIALASYGSTQFVLHGFLLVLSASIIGTLRWVLTQSLLKEMDESSNRILGVVYYISPASAVGLLPIALFSEGREILQSKFLLDSQLLIQSMIFIFV----SGCLAFALIFVEILLVKKTSALSLGIAGSFKDVTQVLLAVLIFGDHLSPINAVGLIVATCGMLFYTFLK 371          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A225X104_9STRA (Drug/Metabolite Transporter n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X104_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.270e-52
Identity = 120/332 (36.14%), Postives = 198/332 (59.64%), Query Frame = 3
Query:  237 VEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCR--CQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQ-VLQAVEPSCSNP----MVVIYHIAPPSAVVMVPMAVLEVIRKGDIASSR--ITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAKGRPQHGSREVGAEQMKSRQ 1205
            ++V+ +V+LWY VS+ M + N+W    W   G+ F    T I+M++K ++SRV+       C G      L  +++WK+ V IG+ T+ DI+LSNLS  Y TVTFYTIVKSG  +W L++++    ++ S  + GV+ +ISSG+ LASYG   F   G +++L AS    LRW L Q +LQA++ S + P    + V+Y+++P SA+ ++P+A+       D ++SR  + +  ++   V I  +G  +F+LIF E+ L+  +S+L++G+ G+ K+V Q+ +AV IF D++    + GL +AT G + Y   K    H + E G  ++K  Q
Sbjct:   44 LDVSVFVVLWYAVSIGMTLFNKWFLRVWAGGGYPFATTMTCINMFVKCLLSRVIDRCSSGGCNGNGSMMALPSNIYWKLAVPIGVCTALDIMLSNLSLFYITVTFYTIVKSGGNVWNLLFSICLGHQRPSWPLFGVIVLISSGIGLASYGSAQFVFYGFVLVLAASVIGTLRWVLTQSLLQAMDDSNAAPRNKVLAVVYYVSPASAIGLLPIALFS--EGSDYSTSRFLLDSQLLMMSLVFIFISGCLAFVLIFIEILLVKKTSALSLGIAGSFKDVTQVLLAVFIFGDQLIAINVFGLVVATCGMLFYTFIK----HTTAEAGDSKLKGYQ 369          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A2R5GEA1_9STRA (Solute carrier family 35 member C2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEA1_9STRA)

HSP 1 Score: 193 bits (491), Expect = 8.730e-52
Identity = 115/325 (35.38%), Postives = 191/325 (58.77%), Query Frame = 3
Query:  213 RAEEYVRPVEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQVLQAVEPSCSNPMVVIYHIAPPSAVVMVPMAVLEVIRKGDIASSRITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAKGRPQHGSREVGAE 1187
            R E  +   E+A W  LW+G SVSM++ N+WL H W   GF FP++ +M+HM +K  +S  ++   RC     P  +   V+W   V +G AT+ D+  SN S+ Y +VTFYTIVKS SL++ L+++++++ +  S+ +   V+VI  G+ LAS G T+FS  G ++++G+S   G RW+L QVL        + ++ IY I+P SA+ ++P++ L V  +    S  I  + +    + I G+GLF+F +I  E++LL  +SS+T+GV   +K+++QI ++V +F D +T   + G  L  LG   Y + K R +  +   G +
Sbjct:    5 RRELTLEVAEIAYWSALWFGFSVSMVVYNKWLLHSWEG-GFNFPLLISMLHMGIKYFLSLAMV---RCNSFAIPD-IPRRVWWLSAVPVGCATALDVAASNASYLYVSVTFYTIVKSSSLVFTLLFSVLYKLQPCSLSLFCAVSVIVVGVVLASMGDTEFSTIGFLLVIGSSAVGGFRWSLTQVLMKQIRCNLDAILTIYLISPASALSLIPLS-LWVDGERFFQSKFIDASLLPYTVLNIVGSGLFAFSMILVELELLRRTSSVTLGVISYVKQMLQIGLSVVVFHDVLTPLNLLGFLLTLLGMFLYTVIKHRARAEAPHAGGK 323          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A6G0WE52_9STRA (TPT domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE52_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.080e-51
Identity = 129/358 (36.03%), Postives = 208/358 (58.10%), Query Frame = 3
Query:  126 YCMVTFGLSALLFILRNLLLQDAANSRVSR----AEEYVRPVEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQVLQ-AVEPSCSNPMVVIYHIAPPSAVVMVPMAVLEVIRKGDIASSRITTTAVV-EVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAKGRPQHGSREVG 1181
            Y  V   L A+  +   L+LQ  A+S  SR        V  ++VA ++L WY +S++M + N+W    W   GF F      +HM +K I+SR+V +W   + +    ++    +W++ V IGL T  DIV+SN+S  Y TV+F+TIVKSG  +W L+++++   +K ++ +L VV VI  G+ LASYG   F + G +++L AS    LRW L Q L   ++ S +  + V+YHIAP SA+ ++P+A+L V  K    S  + T A+  E  + +   G+ SF+LI+ EV+L+  +S+L++G+ G LK+V+QI MA+ +F D+++    +GL +ATLG ++Y   K        E G
Sbjct:   33 YMCVFLSLLAMSLLALKLMLQRQASS-TSRLPPSTRRIVHGLDVAMYILAWYAMSITMTLFNKWFIKVWRG-GFSFVFTIGCVHMTVKSILSRIV-HWRHRRSIAPIASVN---YWRLCVPIGLFTGADIVMSNMSLEYITVSFFTIVKSGGNVWNLLFSILLGLQKPTVPLLVVVVVICFGIGLASYGTIHFVLFGFLLVLFASILGTLRWVLTQFLMHRMDASQNKALSVVYHIAPMSALSLLPIALL-VEGKALSQSVFVQTPALWGECILFLIAGGILSFLLIYVEVELVKKTSALSLGIAGNLKDVMQILMAMLVFHDQLSAINAAGLCIATLGLMSYSYLKATAAASKAEAG 383          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: G5AAR9_PHYSP (TPT domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5AAR9_PHYSP)

HSP 1 Score: 193 bits (490), Expect = 1.020e-50
Identity = 122/345 (35.36%), Postives = 202/345 (58.55%), Query Frame = 3
Query:  237 VEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQ-VLQAVEPSCSNP----MVVIYHIAPPSAVVMVPMAVLEVIRKGDIASSR--ITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAKGRPQHGSREVGAEQMKSRQ--PTLGAGSLNGLEV 1244
            ++V+ +V+LWY VS+ M + N+W    W   G+ F    T I+M++K  +SR++    RC        L  S++WK+ V IG+ T+ DI+LSNLS  Y TVTFYTIVKSG  +W L++++    ++ S  +  V+ +ISSG+ LASYG   F + G +++L AS    LRW L Q +LQA+E S   P    + V+Y+++P SA+ ++P+A+       D A+SR  + +  ++   V I  +G  +F+LIF E+ L+  +S+L++G+ G+ K+V Q+ +AV IF D++    + GL +AT G + Y   K      + +  + ++K  Q  PT  +   +G +V
Sbjct:   75 LDVSVFVVLWYAVSIGMTLFNKWFLRVWAGGGYPFATTMTCINMFVKCALSRLI---DRCSSGGPMLALPPSIYWKLAVPIGVCTALDIMLSNLSLFYITVTFYTIVKSGGNVWNLLFSICLGHQRPSWSLFVVIVLISSGIGLASYGSAHFVLYGFVLVLAASVIGTLRWVLTQSLLQAMEDSNGPPRNKVLAVVYYVSPASAMGLLPIALFS--EASDYATSRFLLDSRLLLMSLVFIFISGCLAFVLIFIEIMLVKKTSALSLGIAGSFKDVTQVLLAVFIFGDQLIAINVFGLVVATCGMLFYTFIKHTTAEAASDARSGKLKGYQRVPTSNSDLEDGSDV 414          
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Match: A0A0P1AN57_PLAHL (Tpt-domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN57_PLAHL)

HSP 1 Score: 192 bits (489), Expect = 1.410e-50
Identity = 122/353 (34.56%), Postives = 207/353 (58.64%), Query Frame = 3
Query:  237 VEVAAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRVVLYWCRCQGMPRPTTLGW--SVFWKVVVIIGLATSGDIVLSNLSFTYATVTFYTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFSMAGLIMILGASCFSGLRWALVQ-VLQAVEP----SCSNPMVVIYHIAPPSAVVMVPMAVLEVIRKGDIASSR--ITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTMSSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMAK------GRPQHGSREVGAEQMKSRQPTLGAGSLNGLEVTN 1250
            ++V+ +V+LWY VS+ M + N+W    W  +G+ F    T I+M++K ++SRV+    RC      + +    +++WK+ V IGL T+ DI+LSNLS  Y TVTFYTIVKSG  +W L+++++   ++ S  + GV+ +ISSG+ LASYG   F + G +++L AS    LRW L Q +LQA+E     S +  + V+Y+++P SA+ ++P+A++      D A+SR  + +  +      I  +G  +F+LIF E+ L+  +S+L++G+ G+ K+V Q+ +AV IF D++    + GL +AT G + Y   K            ++  G E++ + Q  +  GS   L+ +N
Sbjct:   81 LDVSVFVVLWYAVSIGMTLFNKWFLRVWAGSGYPFATTMTCINMFVKCLLSRVI---DRCLSNENGSIMALPSNIYWKLAVPIGLCTALDIMLSNLSLFYITVTFYTIVKSGGNVWNLLFSILLGHQRPSWHLFGVILLISSGIGLASYGSAHFVLNGFLLVLAASVIGTLRWVLTQSMLQAMETTHGASSNKVLAVVYYVSPASAIGLLPIALVS--EGSDYATSRFMLDSQLLFMSLFFIFISGCLAFVLIFIEILLVKKTSALSLGIVGSFKDVTQVLLAVFIFGDQLIAINVCGLVVATCGMLLYTYIKHIMADAAEDARSAKLKGYERLSTSQSDVEGGSQIQLKGSN 428          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig95.17234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JST1_9PHAE1.360e-15157.08TPT domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2ANC6_9STRA9.090e-7544.23Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2FM58_9STRA2.880e-6640.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7TSN0_9STRA1.210e-5330.29Solute carrier family 35 member c2 n=1 Tax=Nannoch... [more]
A0A8K1CFW6_PYTOL1.240e-5337.54Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225X104_9STRA5.270e-5236.14Drug/Metabolite Transporter n=13 Tax=Phytophthora ... [more]
A0A2R5GEA1_9STRA8.730e-5235.38Solute carrier family 35 member C2 n=1 Tax=Hondaea... [more]
A0A6G0WE52_9STRA1.080e-5136.03TPT domain-containing protein n=1 Tax=Aphanomyces ... [more]
G5AAR9_PHYSP1.020e-5035.36TPT domain-containing protein n=3 Tax=Phytophthora... [more]
A0A0P1AN57_PLAHL1.410e-5034.56Tpt-domain-containing protein n=1 Tax=Plasmopara h... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig95contigH-paniculata_contig95:1410..14079 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.4
Seed ortholog evalue1.5e-122
Seed eggNOG ortholog2880.D7FRB1
KEGG koko:K15280
KEGG TC2.A.7
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.UDP-glucose transmembrane transport
EggNOG OGsCOG0697@1,KOG1443@2759
COG Functional cat.EG
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons9
Model size2037
Cds size1296
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931180.6885667-UTR-H-paniculata_contig95:1409..15041622931180.6885667-UTR-H-paniculata_contig95:1409..1504Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig95 1410..1504 +
1691481626.832368-UTR-H-paniculata_contig95:1409..15041691481626.832368-UTR-H-paniculata_contig95:1409..1504Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig95 1410..1504 +
1622931180.8680205-UTR-H-paniculata_contig95:13433..140791622931180.8680205-UTR-H-paniculata_contig95:13433..14079Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig95 13434..14079 +
1691481626.9329894-UTR-H-paniculata_contig95:13433..140791691481626.9329894-UTR-H-paniculata_contig95:13433..14079Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig95 13434..14079 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931180.7024782-CDS-H-paniculata_contig95:1504..16511622931180.7024782-CDS-H-paniculata_contig95:1504..1651Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 1505..1651 +
1691481626.8449318-CDS-H-paniculata_contig95:1504..16511691481626.8449318-CDS-H-paniculata_contig95:1504..1651Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 1505..1651 +
1622931180.719573-CDS-H-paniculata_contig95:4548..47251622931180.719573-CDS-H-paniculata_contig95:4548..4725Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 4549..4725 +
1691481626.8557618-CDS-H-paniculata_contig95:4548..47251691481626.8557618-CDS-H-paniculata_contig95:4548..4725Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 4549..4725 +
1622931180.7362382-CDS-H-paniculata_contig95:7513..76711622931180.7362382-CDS-H-paniculata_contig95:7513..7671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 7514..7671 +
1691481626.8663235-CDS-H-paniculata_contig95:7513..76711691481626.8663235-CDS-H-paniculata_contig95:7513..7671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 7514..7671 +
1622931180.7537696-CDS-H-paniculata_contig95:8183..83511622931180.7537696-CDS-H-paniculata_contig95:8183..8351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 8184..8351 +
1691481626.8769178-CDS-H-paniculata_contig95:8183..83511691481626.8769178-CDS-H-paniculata_contig95:8183..8351Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 8184..8351 +
1622931180.767137-CDS-H-paniculata_contig95:8765..89971622931180.767137-CDS-H-paniculata_contig95:8765..8997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 8766..8997 +
1691481626.8860078-CDS-H-paniculata_contig95:8765..89971691481626.8860078-CDS-H-paniculata_contig95:8765..8997Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 8766..8997 +
1622931180.7870383-CDS-H-paniculata_contig95:10354..104231622931180.7870383-CDS-H-paniculata_contig95:10354..10423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 10355..10423 +
1691481626.8951583-CDS-H-paniculata_contig95:10354..104231691481626.8951583-CDS-H-paniculata_contig95:10354..10423Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 10355..10423 +
1622931180.8114672-CDS-H-paniculata_contig95:11828..119831622931180.8114672-CDS-H-paniculata_contig95:11828..11983Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 11829..11983 +
1691481626.9043343-CDS-H-paniculata_contig95:11828..119831691481626.9043343-CDS-H-paniculata_contig95:11828..11983Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 11829..11983 +
1622931180.8296964-CDS-H-paniculata_contig95:12595..126891622931180.8296964-CDS-H-paniculata_contig95:12595..12689Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 12596..12689 +
1691481626.913144-CDS-H-paniculata_contig95:12595..126891691481626.913144-CDS-H-paniculata_contig95:12595..12689Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 12596..12689 +
1622931180.8500097-CDS-H-paniculata_contig95:13337..134331622931180.8500097-CDS-H-paniculata_contig95:13337..13433Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 13338..13433 +
1691481626.9240954-CDS-H-paniculata_contig95:13337..134331691481626.9240954-CDS-H-paniculata_contig95:13337..13433Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig95 13338..13433 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig95.17234.1prot_H-paniculata_contig95.17234.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig95 1505..13433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig95.17234.1

>prot_H-paniculata_contig95.17234.1 ID=prot_H-paniculata_contig95.17234.1|Name=mRNA_H-paniculata_contig95.17234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=432bp
MVEDEVIMISYCMVTFGLSALLFILRNLLLQDAANSRVSRAEEYVRPVEV
AAWVLLWYGVSVSMIMANRWLFHDWNSTGFQFPIVTTMIHMWLKVIVSRV
VLYWCRCQGMPRPTTLGWSVFWKVVVIIGLATSGDIVLSNLSFTYATVTF
YTIVKSGSLMWILIWALVFRFEKLSIQILGVVTVISSGLFLASYGQTDFS
MAGLIMILGASCFSGLRWALVQVLQAVEPSCSNPMVVIYHIAPPSAVVMV
PMAVLEVIRKGDIASSRITTTAVVEVAVVIAGAGLFSFMLIFAEVKLLTM
SSSLTMGVFGTLKEVVQIAMAVAIFDDRITWYKISGLALATLGSVAYKMA
KGRPQHGSREVGAEQMKSRQPTLGAGSLNGLEVTNGTGALLPYSAVSQQE
VDEELRVFRYTNAEMELEGELEEFSSFTSLG*
back to top

mRNA from alignment at H-paniculata_contig95:1410..14079+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig95.17234.1 ID=mRNA_H-paniculata_contig95.17234.1|Name=mRNA_H-paniculata_contig95.17234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12670bp|location=Sequence derived from alignment at H-paniculata_contig95:1410..14079+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAAGATGGAGCATAGGAATTTGAGCGTGGGGACGGTGGGTGCGGGTGCT GCTGTGCCGTAGGCTGTTGTGGAGCTTTGCAACCAAAGCGAGAGGATGGT TGAAGATGAGGTGATCATGATTTCTTATTGCATGGTCACGTTCGGACTAT CAGCGCTGCTGTTCATTTTGCGGAACTTGTTGCTACAGGACGCAGCCAAC AGCCGAGTGAGCAGAGCCGAAGAGTACGTGCGCCCTGTAGAGGTGAGTAA AACCTTTTGACCTAATAACATAGCTCTATTTCTACGTATATAGATGGTAC ACCCGTTCCTGTCGATACGGAATGATGAGGTGGGTGCTGTTGCTGTGTTA GTTGTCCACTTGTTCACGACCTCACCTTTTCTTCTGCTCTCTTTGCTTTG TTTGGTGGAAGCCAATGTAATCGTCCTGTCGATAAGTGGTGCCTCGGGTT TGTTTCACGTCTATATCCGTGGCTTCACGGTAGTGCTGATGGCTATACTG TACTGTAGTGTCTAATGCCGATTCTGGGTGAACGGTCGGAAAGCAATTGA ACTTCTGGGTCCTTGTTGAACCTTCCGCGCAATGATCCGAGCTGCTTACC ACTCACTGTACGGCCTGGCTGGGACAACGTGGTGTTCGTAGCACTGCTCT CGGTAAACACCGCATGTTCTCTGCCTGCACACAACCTATTGTACTTCCTG TGTATTTTCTTGGCAATTCATTCCGGATTCGCGACTCGAGATTCTCCTTC TCCGTTATCTCATACGAACACCTTATTACACCGCGCCATGTCTTGCGTCT CACGGGTCGTTGTCCATCATTCATCGCTCGATTCGGTATTTCCCTTACGT ATTCTGATATCAGGCCCAGGTTTTTTAGATTAGGGCGGAAATGATGAAAT CTGGAAATCCTGAAAAATTTCAGACGGAAATTAAGAGTCCTAAATCTCCC AGAGCACAAACGAGGTTTCGTGTGTCGTTTGAAATTTACAGAAATTTGCA GAAAAGGCTCAAATCTAGCCGGTGCAGACACCGATATAGAAACTGTGATA AAATATCCCCTTCACAAGAGGAGAAAAGGGACGAATTTTTTGTCATCATC CAAAGGTACGGCTGATACTAGATCGCCAGGTTGAAGATCTTTGTCACAGT ACGTGGGGCCTCTTCTGCACCCAGGGTAACAGCTCGCCAGGAGAGAGATG TGAAGAGGTCTTTGGCTATCCTCGTGAAAACGTTTGCTGTCCCACAATGT GCCAGAGGTGAATATATATAGGTATCCCTTCCAGTCCAATTCCCAGTATA GAGAAAGCCAGATTTGCTCATGTGTGCGTCGATGTTGCTCAACGCAAATG TTGATCCCAAATATTTCCCAAAAAAAAAGACGATTAGTTTGACATACGAC CAACACGCCCTGAGCATCTGGAATTTTAGATAGAGTCCCTGTGGAGGCAA GGTACCAGACTGGAGCTCCGCACCGTTTTCGACCGTTTTTCATATTTCGG CATTTTGGATGTGAACCCGTCCAACATTCCGCAGGCACGTAGCGAGACTG AAGTTGGCCAAAAATCGTGCAGGCCCAACCTGTGCCGCATACGGTGCGAT AGAATCTTGGATCGAAGATCACACTATTCATGTCTTGTGTTCGTTACTTC CAAGTGGCTTACTGTCTGCACCGTACTGACGACTGCAGAGACTGAGCTGT GTGGCGTTTGTAAATATAACATTTTGATGGAAAGTATCCTACCCCGAAAA CTTCAAGATTGCCAGGATTTTCGCCCCCTCAAAATGGTCGCTAGTAGTGG TTCGTGGCTACCTTTTTTTTATCCTTGATTGACTATCTTGTTTTTAAGTG ACTACCTCTATCTAGTAATGTAAATTCATCTTCTGGTCAAACAAACTCAA GGTAGTCGAGAGTTAAACTCGCTGTTGTCAAGCGATACGGTACGGATCGC TGACAAGAAATCTCCCAAAAACACAGTGAAGCTTGCTTTTTGCTAACCTA TAAGAATCCGACTTGAGAAATGAACGCTGAAATTGTAACCCTGTTCTTAA TTCCTGCATAAAAGTATAATGCCGAACTGCTCATGATTCTCGCCACCAAA AGATTTCGAGCCTCCTCCAAAATAAGCGTTTCTTATCATCGGGCCCGTAC TGTAGTCAAGCTTGGGCAACTAAACAAAGACGGCAAACTGTGTGGAATCG GTGATGGTAGTCTCGGAACAGCTATTACATCCTTTATCCAAATCTTGTAA TCACCTTTGCGCACAAATACAATTAGAGCCTTGACCTAACTATTAGCTTT GCACTGTTTTTGTACGGTTAAAATGTGAAAACGAAGTAACATCCCCGGGT GGTACCTAAAAATCGCTCTCATGGGTACGAAGCTTTGTCCTCCCGCTCCC GAGGACGCGTGGTCAATGGTCTCCTGTAATAACTACGGCATGCGAAACAT GATTACGCCTCCTTCCCCCCACCCCCCCACCCACCTACCGTCTCCGCGAT CAGTGATACAAAATTGTAAAAAACTATGTTAAAAATCGACGTTATACAAG TTTGTCTTTGTTCTTCGTTAAATGTCACTCGGGAAAATTAAAATAACAGT TGCGTGTACCTAAATAGCGATATGACTTGGTGCTGTCTATGGAGAAATGC GCTGACGTGGATATCGTTTCATTTTGCGATCTCTAGCTGGCAATCTTGTT GGCAGTCAGTCATGGATGCTGCTCACGCTCTCAAAGTCAAGGCAACACAA ATGTTCGCTGAAGGTATTAATCAAGCTTGAGAGTGCGATAGTGGGACAGT GGGACATGCGGCACTTAGTGACGCATTTTCGGAAAAATCGGAGTTGGTCA CTGGAAGAGTCGAAATTGTATAAAACTGTCTCGAAAACCGCCGGTATAGG TGTGTTTTTGTCCTGTGTTAATGCAACCGTTGCCTCGCCGTCCCTAGCAA CTTGCCCTCTCTGAGTCGAAGTAGAGAAATACTTGCCCACGGCGTGAGTC AACTTTAACATGAGCATTTTAAAAGAGTGCGATAGTCAAAATGTGCCTAC TTGAGTGACGAAAATTTGGAAAGTAAGAAAGTTCATCGCAGATTTAGTCA TCCACTAAGTTTCCTGGGCCTAACTGACATCCTCCGCAGGTCGCTGCATG GGTACTTCTTTGGTATGGCGTTAGCGTGTCCATGATCATGGCGAATCGCT GGCTTTTCCACGATTGGAATTCAACGGGCTTTCAATTTCCTATTGTCACC ACGATGATCCATATGTGGCTTAAAGTGATCGTGTCGAGAGTGGTACTCTA TTGGTGCCGCTGCCAGGTATGTACTTGATTCACTCTGATTTTTGTATCAT CTTGAAACGGCATACGACGATTTTTTTGTTAACGTTCTCAATCAACAAAT GGTGTACCGGGGGGCCTCACGAACAGTCGATCGGGGAGGAACAATGGGAG GGGTATCTTGAACGTCGTATCATTACTCCAATATACCTCTGTTGAAGTTG TGCAGCTTTCTTTAATCTGCAATCGTACTCCCTCCGTCCCATAAGTCTGC AACGTTTTGATTTCTCATTTCTTGTGTGGGCCGTTTCTCTACGAATACGA AGACTTTTTCGGTCATGTATGGCTGGAATTGGACTTATGGACGTAAACTT TAAGAATAGTTATTTCGTTCTCGTATATTGTTCCGAAATAGTTCCGAAAA ATTCGCGAGAAGGGGAACTAAAAAAATGGCTCTTTTCTGCTCTATTTTGA GTGGCTACGCTGCGCCCGGCGGCGGACAAAGCGCCCCCCTATCGTCATAC AACATCTCAGCACCTCGCCAAGAGCTGTACGACTCTCGTGCAACCTCCAG ACCGTCTGCGGCGCGAGTTTCGCAACCAACATTACCACTCCGGCGAGTCC GGCATCTTTTGCTGAGAGCCCATCAGCCCTGGGTAAAAAGTGTGAGCTGA GCGAGGAAGGTCAAAATGCGTTGGCCATACGGTACGCTCTAGCGCTACTT CCCGGTAAGAAACGACTTCCGAAAGGCATTGAGCCAGAGTTGGCGGAGCA GTTTGGAGTTGGCGACCAATATCCCAGACAACTTTGAGTGCGTGTACGAG AACTGGACCATGGCAACACCCTTTCGCTGAGGTCAGCGTCACGAAGCAAG CGGTCGTCGGACCTCACACCGATAAAGTACGCCACGATTCGAAGGGTCAA CGCCGCAAATCGAACCCTGACCCTCGATCAACTGTCTGCCAAGCTAGCCG AAGTTGGTCTCGTAGCCGGTAGCTCAAAGCTTCAGCGATGGCTCAAAGAG GTAGATGCCACGAGGGTGAAACGGCGCATTACTCCATCTCTGTCGCTGAC GCACCGAAAGAACGGGGTAGACTTCATCTAGGATCAAGCAGCAAGGAACC GCATCACTTTCAGGAGAGGCTTCCGAACAGTTCACATCGACGAAGCGTTG TTTTACCTAATTCTCGGCAGGGATCGCGTCCGTATGTTCCGCGGGGAGGA AAGGGTGGGGTCCACCAAAGTACAGCTCAAGAGTCCCATTCCTAAGGTGT TCATCTGCGCCGTTTCGCCTCCAGATCCTTCCCGCGATTCCGACAGGAAG ATTGGAGTGTGGCGCGTTTACGTCATTAAGTAGGCACAGAGGAATTCGGT CCGGCGTGAACGGGGGCAGCAATACGAGTTCGACGTGACCATTGAGGCCG AGGGATACCAGGAGTGGCACACATACTCTTTTCTCTCAAGATTGAAGGAA AAGATGCCGTGGTTGGAGGGTGAGGAAGTGGTTGCGAAGCAGGAGAGAGC GATCTCCCACATGGGAAAGACATGCCGTGAAAGCTCAACGAACTCGCGAG GGACGAACGGTGGAACGTCAATCTCGTAGCTCAGCTTGCGCAGTCACCAG ATCTCAACATCAACGATTTGGGGTTCTTTGCATCTCTGAAAAGTAGGGTT TGGAGGGAGTGTTACGGTACGATAGACGGCCTTGTGAAGGGGGTAAAGAG CATGTACGATGCGTACGACGCCGTAACCTTAGAGAGGGTGTGGCAGAGCC TCTTCAAGAGGTACAACCAGGTCTTGAAGGCGCTAGGAGGTAACGATCTC GAGGTACAGCACACTGAAACTAAGAAAAAGGCAGCATGCGGGAAGTCTGC CAAAATCAGTCAAAATCAGCCGAGAGGCTTTCGACGCGGCGATGGAATGG TGGCTTAATGGAAACGAGGAAAGCTGCGAAGAATAAAATTAACGTGAAAA CACCAAGGAATGCGACGCAAAAATCTGTTTTCGATTCGGAGGTCATTGCA ACAAGTTACACCCTTACCGTCGCAGACTTGTGGGGCGGAAGGAATCTACT TATCAGCAAAATTAGATATTGACCTATAAGTGGCACCCTGAGTCGAATGA AGAGAACCTGATAATCATAGAGAAGATAATTTTGCGTTTCACTGGACAGC TGCAAGTCAAGCAGGGCGTTCTCATGAAGAGGTGGTGGCTGGTTAGATGA CTCAACTGGAGCAAACCCTAAATTGAGGGAAGCGCGATATAATACTTGTG GGGGAGCTCGTAAAAACCCGAAAGGCGTGATCCAGGTTGAATAATAACCC TTATGGGGCTTACACGTCGACTGTCAGTTCTCCAGGATCTGATTTTTGGC CATGTTGTCCACGCAAATAGATGTCAATATGCTGGAAAATAGCAATAAAA GTGATTGTACAGGCGAGGGAGTGATGTGTGGTCCTATCTGAGAAGAGCAT TAGTTAATCTGTGGGCACTTTGCACTCTGCCGAAAGAGCAGCAACGGTCG ATTTGCGCTCTTCGTACACCCCGAGGAGGAACGATGCAAAGTGGGACATA GCCCCAAGGAAGAGAGGGAGATTAAGACACGACGGAGACAGTTAAACGCA TATCCTACTGTAGACGTCCGATGTAAATACAGATTGTGCAATGGTGAGGG CGATTAGCGTCTGTTTTTTGGCGCTGCTTCAGCTGTCAGTTATGTTTAAT AAGTAGGTTCACCCACTTGGCCCTGTACCGTTTCACCATTGTTTGCCACG TTAAACTTAGAAAATGGCGTAATTTTTCCTCGTTTGTCTCTTGTTCATGT TCAGGGCATGCCCAGGCCAACTACCCTTGGCTGGTCCGTATTCTGGAAGG TTGTCGTCATCATCGGGCTCGCTACCTCCGGGGATATTGTGCTGTCCAAC TTATCGTTCACGTACGCAACAGTCACGTTCTACACTATCGTCAAATCTGG CTCTCTCATGTGGTAAGTCAAGGCTCAAGAAAATGAAATTCTGTTTCTAC AGGAGCCGATTACATGGTGCGGCTACTTCGTGCGGTGTGAGTGCTGAGGC TCACGACAGTGTTGGTGGAGCCGCAGATTGATAGGTAGCAGGTTTTCGTG GCTTGTGCGTCGGTTACGCCGATGGTGGTTTGCTTGTTCTGCACTCAGTT TTTTTTCTTCTTCGTCGCCAATCAATTATCTTATCGAAACCTTGGGTCCG AAGCTGTGGGAGTGTAATGACTTCCTTTCTTGCTTTATGTTATCACGTGG TGGGGGCAGTAGTCTCACTCACTTGTCAACGTTGTAGAGAATTGTAGTAT TGATAGGTGGAACATGACCAAATGTTGAGTGATTGTGGTTCAAGCCATCG TCTTATTTGTACTCGTGCTTTCCTGACGTGCGCTTGCGATCAGGCTACGC ATTTGCCTTACCGTGTGTTGGAATATGATTGACTTGTCATCCTGTCCTGG TTATCCCATTGTGCCCATCGCCAGGATCCTGATATGGGCGTTGGTGTTCA GATTCGAGAAGTTGTCGATACAAATATTGGGCGTGGTAACGGTGATCTCC TCCGGCCTGTTTTTGGCGAGCTATGGGCAAACGGACTTTTCGATGGCAGG ATTGATAATGATTCTTGGCGCCTCATGCTTCTCAGGGTTGAGGTAAGTTG GAAGTATTGGAGCTTTCGCGGTACTAAAATGTGGGGAGGGAGCGTCGCGT GGCAAATTACCAGTGTCAAAAGCACGCACTGTCGTTGCGCAGAGTCCATA CAGTTTGTTTTGCAAACACTTACACTGTAGGACATGCACACTTTGTATGA TGATGATGATTTGAAGCACACGTGAGTGGGTGTATGTGGCACTGGTCGGG TTGCGCCCAGGTGGTCTCGGGGGCGAATTCACTGGGCCAAATATGTTCCG TTTTTTTGCACATCTATGCATACCCACTGGAAACGCGGGTGTCTGTATAT GGGCACAACTTGAGCTCGACTGATTGATATGTAACGGTAGTAGAGATGAA TATAATATATATATTGTAACAAATCTTGAAAAAAAAATTCGCTATAAAAA CGACAGGTGGGCCTTGGTGCAAGTGCTGCAAGCCGTGGAGCCCAGCTGTT CGAACCCTATGGTGGTAATTTACCACATAGCTCCTCCGAGCGCGGTAGTC ATGGTCCCCATGGCTGTATTAGAAGTGATTCGTAAGGGAGATATCGCGAG CTCGCGAATAACCACTACGGCTGTCGTGGAGGTGGCAGTCGTGATCGCTG GAGCGGGTTTGTTCTCCTTCATGCTGATTTTTGCGGAGGTGATGCGATAA CTGTGTCCCGTCTTGCCATTTTCTTTTCTACCTCTACTTGGGCTAACAGC GATGGTGCATCGGGCGGCTCAGTCTCTGTCAAAAGTCGGCGCCTGCATGT GCATGGGATTGCATGTGCTTCAAGCGAGGGGGGAGTTGCGTTACTCACCC TCACTTCGTACATCACCATCAAGCACAGTGTCCAGGCGTAAAGATTCTCA AGTTAAACGTTGTGTCCATGAGGGTGTATTTTGTATTCAATACATGTATT GCTAGATCCGAAATGCACAGAAACAAATAGGTGAATGAAGAGAGACCAGA ATGGTGGCATTAGGCTATCATGAGGGCAACATCTTCCTTCTCGATACGTG AAATGGGGTTTGTTGTGTTGCTTACACGGGGTTAAGATGTTGAGTAGTTG TTGGTCGAGGTGACGTTATACAAAACAGATGGAATGTGCGGCAAGGTGTC ATGATGTCAAGCATTCAACTCTAAGTCTGTCGCTAGTGCCCCTATATTGG CACAGTGCAAGCGATCCAATGAATCTGTTTCATCATGGTATCTGGAGCAG AGTGAAATCAATCGCGTTTGTTTCATGGCATTCATACATCATAATGCCAA ACCCTAACATAGGCTGGGTTCTGGGATGTAACAAGAGCGGATTATTGATG AACTTTCCATGATAGATATTGATGCTTGCTCCGATAACCGTTTTATGGCA TCCGGATTCCAACGTTAGAGTCAAAATAAATGGACTTCTTGGATGTGACA GACGGCACTCCTGATTGATATTCCGTTGAAGTTATCGATGTCTCCTTTAA GGAGCGAATTATTGCCTTGCAGTTGCTACCCCAGCAAAAATTATATAACT TGAAGAGTGTCGGGCCCTTTGGTAGTTAGTCGATGCTTATTCGCTTGCTC GCTCGTCTCTGGTAAATAGCGACACGCACGGGCCACTGTCTTCCGATCCA ATGATTAATTAGTCATCTGAAACAGCTTATGACAAACCCTCAATCCTAAT GAAGAAATGCACCTTCTTGTTTCTCCGGTCCTACTTACATTGTCTGCTTT CAGACTTCTGTGTGTGCGTGATGTTGCATGTATCTTAGAGCCGATCAATC CCTTCTTCAGCTTCAGCTGGACCCCTAGAAGGGGTCGAGATTTTGGTGTT GAGGGTGGTACTACCGAATAATAAGTCATTTCAGACGACTAAGTGAGCAT TGGGTGTGTGCAATATGTGTGCTTTTGGTGTATCTGTTTCGGTCTCATGG TGGATTAACGAGTCTCTGTGCCGCTTTGCCCTGTTGCTGATCCGTCGACG CCCTCCCTTTCCTCCTTGCCCCTTGCTTTCGCATTATGTGGAAAGGTAAA ACTGCTGACAATGTCAAGCAGCCTCACGATGGGAGTGTTCGGCACATTGA AAGAAGTGGTACAGGTGAGGAATTGAGACTATTTTCGTTGGGGTTGCTTA TTATTTATTACACGCCGTTGTTGCGTCCTAAGTATTATTTTTGTTCGTGT TTTTCTCCACACATGCTGTAAAACATGTGTTGCGTGAAAAGGTGCGATGG CCGAGAGGGTGTCCATGTGGAGAGTGTTGTGTTTCTGTTTGCGCCAAAGT AAAAATAAAAAAGCAGCGCATCTACAATATGCGGCGTATCTTTGAGTTTT GGGTGATTTCAAGGTTCAAGGAAATTGCACCACACTATCTTAACATACTT GCAGGCCCACCGGTAGCAGCCCACCAACGTTTCGCGCTGCACATTGGGCC ACGCCTTCGTGTTCCCTTGCTTGCGAGGATTAGCTGGATACTTTGTGTGA CTGATTTGGTGCACTGGATGCCAAGAAAACATTGAAGACATTTTGGGGGT TCTTCCTCGAACCAGCTCATAGACCTTCCCTTGTTCAGAGCGGGAATAGA CCTCAGTAGTAGTTTACGTTGAATGCTGCAAGGCTCCCCCCACCTCTCTA GACGAATACCGAATACTTGGTATAGTTTAGATGATTTTTTTTATTGGTCT GAGGTTCAGCTTGTGCGGGATGGATGATGGCACATCAAACGAAGTGTTCA CTCTCTGTTTTTATTTTTTACAGTATTCGGCCGCAGTCGGAGACGGTCCA GGCCACATGGAGTAACCGCGCTCATTATGCTTAACCTTGAGGCGAATACT TGACAAAATAACGTGCAAGCCATTCCGTGGAGACCATGGTTTGTACCGTC GTAGATCTAACGTCACATGTACAACATTGAAGATCCGGATATGTTTGGGT CATGTAGGCCGACAAGTCGTGATACTTTGCGGCAAGGCACCTGGTTTCTT ACGCAAAGCCCGTTTGATCTTGCAATTCGAAGTGCTCGTATTCGTCTGTG GGGGGGTGAAGGTGTTTTTGTCCTCTCGACGCACTTGACACAATACCCTG CTTGTGCCCCCCTTTTTATTCCTAGTCGTCCCTGCTGTAAATGCACTCGA GAGCTAAAAAAAAAAAAATGGTTGATGATGACAATTTTTTTTATAATCTA GATATAAAGGTGCTTCAACACAAAAAAATTTCTTTTACCGAAAAATTCGA ATTTAATTGCGATACGTTATGATTTTTGTTCAATACAGAAGCTAAAGAAT TTTTTTTGGTATTGTTCTTTTACAAAATGTTGATAAATTTGCTATTTTTG AACTTGAAAGTAAAAGTATACCGTTTATAGGGGTGGGTTGTTCGACATAC CTATTTTTGTATCTGTTTTCTGTTCCTGATGCCTGATATTTTATACATCG ATCGCACCACCTCCTCCACGTTTTTTTGTGTGTCTGTGTGTGTGTGTGTG TGTGTGTGTGTTTTGCAAGATTGCTATGGCGGTCGCAATATTTGACGACC GCATAACCTGGTACAAGATCTCGGGACTGGCGTTGGCCACGCTCGGAAGT GTTGCCTACAAGATGGCCAAAGGAAGGCCACAGCATGGTTCTCGGGAAGT GGGTGCAGAGCAAATGAAAAGCAGGTGAGCAGGCGGCCCCCAACCCTTCG TAGGTCTACCCCGCTTTGCATGATCCCGAGGTTCGGTCTGACTTTCGTGA CTTCACTCGTGCATGTATAGACCGCTTTCGGCAAAGCGTTGGTTCGATGC GAGAACACCTACCTGTGAAACAAAAAAACGCGTACTATGCACTTTGGTGG TACCCCTCTCTTTGGCTCCTTGTATGTTTTTTTCTTCTTGTAATTGTGGA AAAGTCGTCCATTTAAGGACCGTCCAGGGTGTTCAAATCGCTATGGTGGG TCTAATCATCTACTCTGTAACCAACTGTACACAAATGTATCATACAAGAG TTTATGCGCTGCGCCCTCTTCGGAGTTGGGAGTTCATTCGAGGGGACCAG CAACGCGACCTCGTGTTTCAGAGCCACCGCTACGCCAGTACAGCGCGCGG TTTTTCCTGGTTGAGGCTTATGCAGACAGATTCGCTGCCCTTGCCTTGCC GATACGCTCACATGGAAACAGATGCCACATCCTGTTGCTGCTTTATCACC TCGATTTTCCCCCTTTGGTTGTTTGAATCTTGTTAACACCACGGCGAGAT AACTTTCAGCCCACATTGTATCCCGGTCAAATGTAGGCAACCAACGCTCG GTGCAGGAAGCTTGAACGGGCTAGAAGTGACCAACGGGACAGGAGCCCTG CTTCCGTATTCAGCGGTTTCACAGCAGGAGGTAAGCTTGGCGGAGGGGGG GGTGAGGGTGAGGATTATTATCATTGCTACGAGCTTGTGTTAGGGGCTCT TCGTTGAAGGCGTGCGGTTGCAAAGAGGTTTCTCGGAGGTTAGAGGGGTG AATCCTTTGTTCTTAGATGTATTACTCGCCGGCATCTTGCGGCTTGTATT GTCTGGTCTGCAAGGGTCTTTATATCTATGCGCGTGTTAAGGTGCTGTTG CGACTACTGAGGTGAGGCCATTGAGCCTGCCGCATGTACATATATGTGAC AATCTTGATTAACGGTTGTGTGCTTGGCCGTTCTAATAACGGAATTGATG TTTGTTTCACTGCTCCGAGTAGGTTATGTCTCATTTTATTCACCTAATGC GTCAGTTCTACCATGTGGGACACCCGGACACGCTTCTCTCTCATCGAAAT AACCGGTATTGTCATGACTTGGGGTGGTCGTGGCCAACAATCGGAAGTCT TTGATGGTCTTCTTTTTGTTTCTCGGATTTTCACTACATTGAAGTATCGT TATACACCTTTGCCCGCTTGTACTTCCAGTAGTCTCACGCAAAATTCTTA CTGGTTGCAAGTTCTTCTCCATGAACGGGTTTTTTCCGTGTCGGCGGTTT TGTCTTTCGTGTGGTCGGCGGCACACAGGTCGACGAAGAGCTTCGAGTAT TCAGATATACCAACGCTGAGATGGAGCTAGAAGGAGAGCTAGAAGAATTT AGTTCTTTTACTTCGTTAGGCTGACGGCACGCGCTAAAGCCGCTATATTT TATCGCGTATACTACAACAGTCGCTCTACAGTACTTTTATAACTGAAACA GAGTATTTAGGGGTGTTTGTCGAGATTGTGCGGAGGCTCTAATTCTACAA CCACGTAGGTGTAGTTTTAACCTTTTTTTTTTCAGTCGTTTGTGGTGAGT CAGGGAGTTTGCCGTGCGCCGTTGATTGTGTGTATTTTCTGCATGTGGAT GGTGTGTCATGTGCAGAGAACGCACCAACTGTCGTATGTTTTGCTGTGTG CCTGATTGGGTGTGCACATTGAACCAGGCAGTGGGTGTACATGCTTCGTG TGATTTGTCTTGTTAGGAGAAAACGAACGTTTGAAGAGATTGTTTTGTAT GATTTCCTCTTCAGAGTCATTTTTTGGATTAGTGTTTTTGCATCGGACGG GGTAGGTGTTGCTCACATGTTTCGGCGTTTCCCCTGTGTATGTCATTTAA GTCGAAGACAAATGCCTTCTGTTGTTTTGAATGTAAAGAGCGTCTGGTAA TAATGGCGCGCCTTCTTTTGTTCGTACAGAGCATCGGGGGATACAATGAG CAACATGTTTAGAACAGCATAAAGCCTTGTTGGATTACCAGTGCCTCATT AGACTTTTTACCATTCCCCC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig95:1410..14079+

>mRNA_H-paniculata_contig95.17234.1 ID=mRNA_H-paniculata_contig95.17234.1|Name=mRNA_H-paniculata_contig95.17234.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2592bp|location=Sequence derived from alignment at H-paniculata_contig95:1410..14079+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGAAGATGAGGTGATCATGATTTCTTATTGCATGGTCACGTTCGG
ACTATCAGCGCTGCTGTTCATTTTGCGGAACTTGTTGCTACAGGACGCAG
CCAACAGCCGAGTGAGCAGAGCCGAAGAGTACGTGCGCCCTGTAGAGATG
GTTGAAGATGAGGTGATCATGATTTCTTATTGCATGGTCACGTTCGGACT
ATCAGCGCTGCTGTTCATTTTGCGGAACTTGTTGCTACAGGACGCAGCCA
ACAGCCGAGTGAGCAGAGCCGAAGAGTACGTGCGCCCTGTAGAGGTCGCT
GCATGGGTACTTCTTTGGTATGGCGTTAGCGTGTCCATGATCATGGCGAA
TCGCTGGCTTTTCCACGATTGGAATTCAACGGGCTTTCAATTTCCTATTG
TCACCACGATGATCCATATGTGGCTTAAAGTGATCGTGTCGAGAGTGGTA
CTCTATTGGTGCCGCTGCCAGGTCGCTGCATGGGTACTTCTTTGGTATGG
CGTTAGCGTGTCCATGATCATGGCGAATCGCTGGCTTTTCCACGATTGGA
ATTCAACGGGCTTTCAATTTCCTATTGTCACCACGATGATCCATATGTGG
CTTAAAGTGATCGTGTCGAGAGTGGTACTCTATTGGTGCCGCTGCCAGGG
CATGCCCAGGCCAACTACCCTTGGCTGGTCCGTATTCTGGAAGGTTGTCG
TCATCATCGGGCTCGCTACCTCCGGGGATATTGTGCTGTCCAACTTATCG
TTCACGTACGCAACAGTCACGTTCTACACTATCGTCAAATCTGGCTCTCT
CATGTGGGCATGCCCAGGCCAACTACCCTTGGCTGGTCCGTATTCTGGAA
GGTTGTCGTCATCATCGGGCTCGCTACCTCCGGGGATATTGTGCTGTCCA
ACTTATCGTTCACGTACGCAACAGTCACGTTCTACACTATCGTCAAATCT
GGCTCTCTCATGTGGATCCTGATATGGGCGTTGGTGTTCAGATTCGAGAA
GTTGTCGATACAAATATTGGGCGTGGTAACGGTGATCTCCTCCGGCCTGT
TTTTGGCGAGCTATGGGCAAACGGACTTTTCGATGGCAGGATTGATAATG
ATTCTTGGCGCCTCATGCTTCTCAGGGTTGAGGATCCTGATATGGGCGTT
GGTGTTCAGATTCGAGAAGTTGTCGATACAAATATTGGGCGTGGTAACGG
TGATCTCCTCCGGCCTGTTTTTGGCGAGCTATGGGCAAACGGACTTTTCG
ATGGCAGGATTGATAATGATTCTTGGCGCCTCATGCTTCTCAGGGTTGAG
GTGGGCCTTGGTGCAAGTGCTGCAAGCCGTGGAGCCCAGCTGTTCGAACC
CTATGGTGGTAATTTACCACATAGCTCCTCCGAGCGCGGTAGTCATGGTC
CCCATGGCTGTATTAGAAGTGATTCGTAAGGGAGATATCGCGAGCTCGCG
AATAACCACTACGGCTGTCGTGGAGGTGGCAGTCGTGATCGCTGGAGCGG
GTTTGTTCTCCTTCATGCTGATTTTTGCGGAGGTGGGCCTTGGTGCAAGT
GCTGCAAGCCGTGGAGCCCAGCTGTTCGAACCCTATGGTGGTAATTTACC
ACATAGCTCCTCCGAGCGCGGTAGTCATGGTCCCCATGGCTGTATTAGAA
GTGATTCGTAAGGGAGATATCGCGAGCTCGCGAATAACCACTACGGCTGT
CGTGGAGGTGGCAGTCGTGATCGCTGGAGCGGGTTTGTTCTCCTTCATGC
TGATTTTTGCGGAGGTAAAACTGCTGACAATGTCAAGCAGCCTCACGATG
GGAGTGTTCGGCACATTGAAAGAAGTGGTACAGGTAAAACTGCTGACAAT
GTCAAGCAGCCTCACGATGGGAGTGTTCGGCACATTGAAAGAAGTGGTAC
AGATTGCTATGGCGGTCGCAATATTTGACGACCGCATAACCTGGTACAAG
ATCTCGGGACTGGCGTTGGCCACGCTCGGAAGTGTTGCCTACAAGATGGC
CAAAGGAAGGCCACAGCATGGTTCTCGGGAAGTGGGTGCAGAGCAAATGA
AAAGCAGATTGCTATGGCGGTCGCAATATTTGACGACCGCATAACCTGGT
ACAAGATCTCGGGACTGGCGTTGGCCACGCTCGGAAGTGTTGCCTACAAG
ATGGCCAAAGGAAGGCCACAGCATGGTTCTCGGGAAGTGGGTGCAGAGCA
AATGAAAAGCAGGCAACCAACGCTCGGTGCAGGAAGCTTGAACGGGCTAG
AAGTGACCAACGGGACAGGAGCCCTGCTTCCGTATTCAGCGGTTTCACAG
CAGGAGGCAACCAACGCTCGGTGCAGGAAGCTTGAACGGGCTAGAAGTGA
CCAACGGGACAGGAGCCCTGCTTCCGTATTCAGCGGTTTCACAGCAGGAG
GTCGACGAAGAGCTTCGAGTATTCAGATATACCAACGCTGAGATGGAGCT
AGAAGGAGAGCTAGAAGAATTTAGTTCTTTTACTTCGTTAGGCTGAGTCG
ACGAAGAGCTTCGAGTATTCAGATATACCAACGCTGAGATGGAGCTAGAA
GGAGAGCTAGAAGAATTTAGTTCTTTTACTTCGTTAGGCTGA
back to top