prot_H-paniculata_contig9494.17231.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9494.17231.1
Unique Nameprot_H-paniculata_contig9494.17231.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length163
Homology
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 7.490e-83
Identity = 132/160 (82.50%), Postives = 147/160 (91.88%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLTSHVVERV 160
            MLDLS INPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRIT+DPFVMTYL PLR+RIRESVL+HL +PY+KITM FMAGEL+LK +EVE LLIDLILDRRLNGKIDQI+G+LLL+   +T++SRKHDA+ERWS SLRSL+S V  RV
Sbjct:  197 MLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 356          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.200e-80
Identity = 130/160 (81.25%), Postives = 148/160 (92.50%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLTSHVVERV 160
            MLDLS INPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRIT+DPFVMTYL PLR+RIRESVL+HL +PY+KITM FMAGEL+LK +EVE LLI+LILDRRLNGKI+QI+G+LLL+  ++T++SRKHDA+ERWS SLRSL+S V  RV
Sbjct:  289 MLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 448          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.060e-55
Identity = 94/160 (58.75%), Postives = 125/160 (78.12%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLTSHVVERV 160
            ML LSDINPFAAREAKV+QEEKE+ AMM+LRMAYE NDLA+FE+TL +K NRI DD F+M Y++PL+RR+RE VLL + RPY++I ++FMA ELNL    VE LL++LILD RL+G IDQ+QG+L + +    +S +K++AL  WS+ LR  T+ +  R+
Sbjct:  248 MLALSDINPFAAREAKVYQEEKEVAAMMELRMAYETNDLARFEKTLQNKANRILDDNFIMAYVEPLKRRMREQVLLAIVRPYRRINLAFMARELNLPEPAVEGLLVELILDERLSGSIDQLQGFLQVGEDDADNSPKKYEALMGWSDELRKATTALTSRI 407          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A7S2B813_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B813_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.140e-54
Identity = 94/160 (58.75%), Postives = 118/160 (73.75%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLTSHVVERV 160
            ML LSDINPFAA EA  +QEEKEI+AM  LR AYE NDL  FER L DKRNRI  DPF+M Y++PL+RR+RE VLL L +PY +I + F+A EL L+ SEVE LL+D+ILD+R+ GKIDQI G+LLL         +K+DALE+W+ +L SL  ++  RV
Sbjct:   38 MLALSDINPFAAPEALAYQEEKEIIAMRALRSAYEANDLVSFERALLDKRNRIISDPFIMQYVEPLQRRMREQVLLVLVKPYHRIRVEFVAAELKLEVSEVELLLVDMILDKRVFGKIDQINGFLLLGGESDNVVEKKYDALEKWTNTLSSLNKNLGARV 197          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 185 bits (469), Expect = 9.920e-54
Identity = 88/160 (55.00%), Postives = 127/160 (79.38%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLTSHVVERV 160
            ML LSDINPFAAREAKV+QE++EI AMM LR AY+ N+LAKFERTL + RNRI DDPF+M+Y++PLR ++RE VL+ L +PY K++M F++ EL ++  EVE L++++ILD R  GKIDQI G L+L   KQ+ +++K++AL+RWS++L  L + + +++
Sbjct:  288 MLALSDINPFAAREAKVYQEDREITAMMALRQAYDANELAKFERTLREDRNRILDDPFIMSYIEPLRHKMREQVLISLVQPYNKVSMKFLSQELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKI 447          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.320e-53
Identity = 94/160 (58.75%), Postives = 126/160 (78.75%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLTSHVVERV 160
            ML LS+INPF+AREA  +QE+ EIVAM +LR AYE NDL  FE+TL DK N+I  DPF+MTY++PLRRR+RE VLL L RPY++I + F+A EL L+   VE LL+D+I+D+R++GKIDQIQG+LLL   + + SS+K+DALE+W  +L SLT+++  RV
Sbjct:  313 MLALSEINPFSAREAIAYQEDPEIVAMRNLRSAYEANDLGSFEKTLLDKSNKIIADPFIMTYVEPLRRRMREQVLLALLRPYKRIRIEFVAQELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARV 472          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.150e-50
Identity = 94/152 (61.84%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSL 152
            ML LSDINPFAAREA  FQEEKEIVAM  LR AYE NDL  FE TL DK NRI +DPF+MTY+ PLRRR+RE VLL L RPY +I +SF+A EL L   EVE L++D+IL+ R+ GKIDQI+G+LLL D     + +K DA+  W++SL +L
Sbjct:  335 MLALSDINPFAAREAIAFQEEKEIVAMRSLRTAYEANDLTTFESTLKDKSNRILEDPFIMTYVAPLRRRMREQVLLALVRPYHRIQLSFIARELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEAL 486          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.190e-48
Identity = 83/130 (63.85%), Postives = 111/130 (85.38%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDS 130
            ML +SDINPFAAREAKVF ++KEIVAM DLR   E NDLA+FERT+ +K+N+I D+PF+MTY+ PLRRR+RE VLL+LTRPY+K+T++F+A EL L   EVE+LL+D+ILD++L+  IDQI+G+++LE S
Sbjct:  195 MLTVSDINPFAAREAKVFSDDKEIVAMSDLRQCLEANDLARFERTIKNKQNKILDEPFLMTYIQPLRRRMREQVLLNLTRPYKKVTVAFLARELALNVDEVESLLVDMILDQKLSAHIDQIKGHVILEQS 324          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: A0A7S2V3G5_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3G5_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.610e-46
Identity = 88/176 (50.00%), Postives = 122/176 (69.32%), Query Frame = 0
Query:    1 MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDS----------------KQTSSSRKHDALERWSESLRSLTSHVVERV 160
            ML LSDINPFAAREAKV+Q+ +EI+ MM+LR AY+ +DL +FERTL D+RNRI DDPF+M Y+ PLR+R+RE V+L L RPY+ I +  +A EL  +  EVE +++ +ILD RL+GKIDQI   LLL  S                  +S+++K+DAL +W+ S+ SL+  + ER+
Sbjct:   42 MLALSDINPFAAREAKVYQDAQEILGMMELRAAYDASDLGRFERTLRDRRNRILDDPFIMAYVAPLRQRMREQVVLRLCRPYKCILLKTLAKELAQEVQEVEKIVVAMILDGRLSGKIDQIAQALLLNKSFGSTAGSSSSETGSALTLSSNTKKYDALNQWTASVESLSQCIGERM 217          
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.500e-45
Identity = 83/149 (55.70%), Postives = 117/149 (78.52%), Query Frame = 0
Query:    5 SDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSEVEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLRSLT 153
            S INPFAA EAKV+Q+++E++AMM+LR+AY+ NDL +FERTL  K N I DD F+  Y++ LRRR+RE VLL +T+PY K+T++ +A EL L R E+E+LL+DLILD+R+ G+IDQI G++LL    + SSS KH AL RW+++L++ T
Sbjct:  294 SSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGR-SSSGKHAALARWADALQAGT 441          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9494.17231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI7.490e-8382.50COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE1.200e-8081.25COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A836CJA4_9STRA1.060e-5558.75COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A7S2B813_9STRA1.140e-5458.75COP9 signalosome complex subunit 2 n=1 Tax=Florenc... [more]
A0A6V1ITC2_HETAK9.920e-5455.00COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2BKS2_9STRA2.320e-5358.75COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S2W4K8_9STRA1.150e-5061.84COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A7S3M6V7_9STRA1.190e-4863.85COP9 signalosome complex subunit 2 n=1 Tax=Spumell... [more]
A0A7S2V3G5_9STRA1.610e-4650.00COP9 signalosome complex subunit 2 n=1 Tax=Fibroca... [more]
W7U093_9STRA1.500e-4555.70COP9 signalosome complex subunit 2 n=2 Tax=Monodop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00753PINTcoord: 61..152
e-value: 1.4E-16
score: 71.0
NoneNo IPR availableGENE3D1.25.40.570coord: 1..162
e-value: 1.7E-39
score: 137.9
NoneNo IPR availablePANTHERPTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..159
IPR000717Proteasome component (PCI) domainSMARTSM00088PINT_4coord: 61..152
e-value: 1.4E-16
score: 71.0
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 26..127
e-value: 2.5E-20
score: 72.9
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 1..132
score: 21.95
IPR037750COP9 signalosome complex subunit 2PANTHERPTHR10678:SF3COP9 SIGNALOSOME COMPLEX SUBUNIT 2coord: 1..159
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 55..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9494contigH-paniculata_contig9494:243..1634 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9494.17231.1mRNA_H-paniculata_contig9494.17231.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9494 213..1634 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9494.17231.1 ID=prot_H-paniculata_contig9494.17231.1|Name=mRNA_H-paniculata_contig9494.17231.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp
MLDLSDINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKR
NRITDDPFVMTYLDPLRRRIRESVLLHLTRPYQKITMSFMAGELNLKRSE
VEALLIDLILDRRLNGKIDQIQGYLLLEDSKQTSSSRKHDALERWSESLR
SLTSHVVERVNW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR037750COPS2
IPR036390WH_DNA-bd_sf