mRNA_H-paniculata_contig12734.1722.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: A0A6H5JH35_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH35_9PHAE) HSP 1 Score: 461 bits (1187), Expect = 8.510e-157 Identity = 253/316 (80.06%), Postives = 272/316 (86.08%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAAT-GGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPRVQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VALACHLRVAS +AS+GLPEVLIGLLPGAGGTQRLPRLV AEM+LSMITTGKMI AAKALEAGLVD+ V D+V AA +FA RRLP+VAGGL AL T RLLKDP +LA+CDAAA KIGPPVRGAEP WS VEALRAA GG A GMA E LFS L QSQQSRARRHLFLAERA A RIP T AAPP+VQSVGVIGAGTMGAGIAIAFLFAG +V LVDAKQENLDKGLAY+QRGVLSAARR KISKKT EA K LL PALSI+ATKDCD++VEAVFE+MGLKKRIFK+LDS+CK SA+LCTNTSTLDI
Sbjct: 9 VALACHLRVASPKASLGLPEVLIGLLPGAGGTQRLPRLVKAEMALSMITTGKMIPAAKALEAGLVDHAVGASAPDLVEAAVSFARRRLPQVAGGLDALRTGGRLLKDPVPVVLALCDAAAAKIGPPVRGAEPRWSCVEALRAAAAGGGLATGMAREGALFSTLIQSQQSRARRHLFLAERA-AFRIPRTLAAPPKVQSVGVIGAGTMGAGIAIAFLFAGFKVTLVDAKQENLDKGLAYLQRGVLSAARRGKISKKTAEATKALLNPALSIDATKDCDMIVEAVFENMGLKKRIFKQLDSVCKPSAILCTNTSTLDI 323
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: D7G579_ECTSI (Enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G579_ECTSI) HSP 1 Score: 429 bits (1104), Expect = 3.060e-143 Identity = 243/317 (76.66%), Postives = 261/317 (82.33%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAATGGD-FARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPRVQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVL-CTNTSTLDI 945
VALACHLRVAS +AS+GLPEVLIGLLPGAGGTQRLPRLV AEM+LSMITTGKMI AAKALEAGLVD+VV D+V AA +FA RRLP+VAGGL AL T RLLKDP +LAVCDAAA KIGPPVRGAEP WS VEALRAA GD A GMA E LFS L QSQQSRARRHLFLAERA A RIP TPAAPP+VQSVGVIGAGTMGAGIAIAFLFAG +V LVDAKQENLDKGLAY+QRGVLSAARR KISKKT EA K LL PALSI+ATKDCD+ AVFE+MGLKKR + + C + C+NTSTLDI
Sbjct: 107 VALACHLRVASPKASLGLPEVLIGLLPGAGGTQRLPRLVKAEMALSMITTGKMIPAAKALEAGLVDHVVGASAPDLVEAAVSFARRRLPQVAGGLDALRTGGRLLKDPVPVVLAVCDAAAAKIGPPVRGAEPRWSCVEALRAAAAGDGLATGMAREGALFSTLIQSQQSRARRHLFLAERA-AFRIPRTPAAPPKVQSVGVIGAGTMGAGIAIAFLFAGFKVTLVDAKQENLDKGLAYLQRGVLSAARRGKISKKTAEATKALLNPALSIDATKDCDMT--AVFENMGLKKRTLRSSSTRCVSHPPSSCSNTSTLDI 420
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: A0A835ZCY2_9STRA (Enoyl-CoA hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY2_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.040e-85 Identity = 170/320 (53.12%), Postives = 208/320 (65.00%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRS--RLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAAT--GGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPRVQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSI-EATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VAL+CH RVAS RA +GLPEV IGL+PGAGGTQRLPRLV +++L MITTG + A AL+AGLVD++ AP D++ AA A + V GG A RS R L I C A K G PV G EP+WS++EALRAA G F G+ TE LFSRL SQQSR RRHLFLAER ASR+P P V+ VG+IGAGTMG+GIAIA L G++V+LVDA E L +G+ VQ ++ A +R K+S++ A L A SI + D+V+EAV E M LKK IFK+LD C+ AVLCTNTSTLD+
Sbjct: 95 VALSCHYRVASPRARLGLPEVKIGLIPGAGGTQRLPRLVPIDLALHMITTGATVKAGDALQAGLVDHISAPG-QDLIAAAVAHVRGQPDFVEGGHVADARRSGRRALVSGAEAISEACAKALAKCGAPVMGREPVWSAIEALRAAAARGATFEGGLETEGHLFSRLLASQQSRGRRHLFLAERE-ASRMPAPSPKPSPVKQVGIIGAGTMGSGIAIAHLMVGLEVVLVDANPEALQRGVKLVQGSLMRAVKRGKLSEQAAMAAGAKLKTAGSIGKELSQVDMVIEAVVEKMELKKAIFKQLDDACRDGAVLCTNTSTLDV 412
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: UPI0003B744AB (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B744AB) HSP 1 Score: 232 bits (592), Expect = 1.720e-67 Identity = 146/317 (46.06%), Postives = 194/317 (61.20%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPR--VQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VAL H R+A+ + +GLPEV +GLLPGAGGTQRLPRLV E +L MI G ISA KA GLVD +VAP+ D+ +A AFA ++ + R+ D S DA A RG E + +EA++AAT G+ TER LF+RL QS A RHLF AERA A++I P PR V++VGVIGAGTMG GI + FL AG+ V LV+ +Q+ LD+G+A +++ ++A + ++S + E LL P L +EA DCDLV+EAVFE M +KK +F LDS+ K A+L TNTS L++
Sbjct: 104 VALGAHYRIAAAGSKLGLPEVKLGLLPGAGGTQRLPRLVGVEAALGMIAKGDPISAEKAQGLGLVDRLVAPE--DLRESAIAFAQEKVGQP-------IPRTGARTDKLSTDREAFDAFAKANARRFRGLEAPQACIEAVKAATETSLDEGLKTERALFTRLMTGDQSAALRHLFFAERA-AAKIDDVPKDTPRIPVKTVGVIGAGTMGGGITMNFLSAGIPVTLVEREQDALDRGVATIRKNYEASAAKGRLSSEQVEQAMALLTPTLEMEALSDCDLVIEAVFELMKIKKEVFSRLDSIVKPGAILATNTSYLNV 410
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: A0A1I3BUN3_9BRAD (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Bradyrhizobium sp. Gha TaxID=1855318 RepID=A0A1I3BUN3_9BRAD) HSP 1 Score: 226 bits (576), Expect = 3.840e-65 Identity = 142/320 (44.38%), Postives = 201/320 (62.81%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRL---LKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPRVQ--SVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VAL CH R+A++ A +GL EV +GLLPGAGGTQRLPRLV E +LSMI TG+ ++A AL L+D +V D +V A FA R+ S+L T RL ++DP A+ D +I RG + ++A+ AA FA GMA ER LF+ L +S QSRA+RH+F AER A+++ P PR+ VG++G GTMG GIA+ FL G+ V +V+ +Q LD+GLA ++R AA R ++S + + +LL +L+IEA DCDL++EAVFESM +K+ +F++LD++ K A+L +NTS LD+
Sbjct: 103 VALGCHYRIATRSAKLGLSEVKLGLLPGAGGTQRLPRLVGVEKALSMIVTGEPVTATDALGMDLIDRLV--DDDSLVREAILFARERISARDHPRSSLRT-DRLADAVRDP-----AMFDRFRHEIAGKTRGFAAPEACIKAIEAAVKLPFADGMARERALFASLVKSDQSRAQRHVFFAERT-AAKVDDIPPGVPRIPIAGVGIVGTGTMGGGIAMNFLSIGIPVTIVEREQAALDRGLATIRRNYERAASRGRLSGEEVDKAMSLLASSLAIEALADCDLIIEAVFESMAVKQEVFRKLDAVAKPGAILASNTSRLDL 413
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: A0A0G4J7P1_PLABS (Enoyl-CoA hydratase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7P1_PLABS) HSP 1 Score: 226 bits (576), Expect = 7.840e-65 Identity = 144/317 (45.43%), Postives = 192/317 (60.57%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDT-SDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPP-RVQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VALACHLRVA A GLPEV +GL PGAGGTQRLPRL+ +L MITTG+M+ A AL+ GL+D+VV T D++ AA A +VA S + ++ S + A A + + ++VEA AAT +F G+ E +F +L QSRA++H+F A+RA S +P +V+ VG+IGAGTMG GIA+ F+ G+ V+LVDAKQE LDKG+A ++ SA R ++ T + +LL P+L A DCD+V+EAVFE M +KK + K LD +CK SAVLCTNTSTL I
Sbjct: 114 VALACHLRVALPTAKFGLPEVQLGLCPGAGGTQRLPRLIGVPDALPMITTGRMLPAPVALKKGLIDHVVQGKTRDDLLRAAIVIARDSKIDVA---SRRVSAWPVVPTMPSSVWDGARAMAARAARGFLAPQQCIAAVEA--AATLPNFKAGLQAESKIFKQLLLGSQSRAQQHVFFAQRA-VSLVPGVDMRKAIKVKKVGIIGAGTMGGGIAMCFIEVGVPVVLVDAKQEFLDKGIAVIKSNYQSAVSRRRLPAATMQKYVSLLTPSLDYAALADCDVVIEAVFEEMSIKKAVLKRLDEVCKPSAVLCTNTSTLSI 424
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: UPI00053BDB26 (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=Sphingomonas sp. 37zxx TaxID=1550073 RepID=UPI00053BDB26) HSP 1 Score: 224 bits (571), Expect = 2.010e-64 Identity = 146/318 (45.91%), Postives = 195/318 (61.32%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILA-VCDAAAVKIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPR--VQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
+ALACH RVA A +GLPEV +GLLPGAGGTQRLPR+V A+ +L ++T+G+ I AA+A GL+D +VA ++ A AFA VA G +C R R K + + D K RG S V A+ AA F G+A ER LF L S +S A+RH+F AER AS+IP P + P + SVGVIGAGTMG GIA+ FL G+ V LV+ +QE LD+G+A ++R +A++ +++ + E LL PALS++A DLV+EAVFESM +K+ IF LD LCK A+L +NTS LD+
Sbjct: 106 LALACHYRVAVASARVGLPEVHLGLLPGAGGTQRLPRIVGADSALDLMTSGRAIPAAQAHALGLIDAIVAE--GELRAGAIAFAQDL---VAAGKPLVCARDREDKLAADRQRPDLFDTFRQKNARAFRGFRAPESIVCAVEAAVTLPFEEGLARERTLFEALMASTESAAQRHMFFAERE-ASKIPDIPKSVPTLPIASVGVIGAGTMGGGIAMCFLNIGIPVTLVELRQEALDRGIAVIRRNYEGSAKKGRMTAEQVEQRMALLTPALSLDALARADLVIEAVFESMAVKQDIFGTLDRLCKPGAILASNTSFLDL 417
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: UPI000BE536C2 (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=Mangrovitalea sediminis TaxID=1982043 RepID=UPI000BE536C2) HSP 1 Score: 224 bits (570), Expect = 3.480e-64 Identity = 145/317 (45.74%), Postives = 195/317 (61.51%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPR--VQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VAL C RVA A +GLPEV +GLLPGAGGTQRLPRL+ A+ +L +I G + AAKA GLVD VV + D+V A AFA R+L E L R + +K + A + + + RG + +EA+RAAT F GM ER LF L QS +SRA+RH+F AER A ++P PR + +V VIGAGTMG GIA+ F AG+ V L++ KQ+ LD+GLA ++R + AR+ ++++ E +L+ P LS + DLV+EAVFE+M +KK +FKELD +CK A+L TNTSTLD+
Sbjct: 106 VALGCDYRVALDSAKVGLPEVKLGLLPGAGGTQRLPRLIGADAALPIIAEGNPVPAAKAKALGLVDEVV---SGDLVAGAVAFA-RKLVESNAPQRPL--REQAVKLDNPNLFAEYEKSIAR---KQRGFLSPFRCIEAVRAATELPFDEGMKRERALFMELMQSSESRAQRHVFFAEREVA-KVPGIAKDTPRRDINTVAVIGAGTMGGGIAMNFANAGIPVRLLEVKQDALDRGLAVIRRNYENTARKGRLTQDDVEKRMSLIQPTLSYDDLGSVDLVIEAVFETMDIKKAVFKELDRVCKPGAILATNTSTLDV 412
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: A3UFG2_9PROT (Fatty oxidation complex, alpha subunit n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UFG2_9PROT) HSP 1 Score: 223 bits (568), Expect = 5.290e-64 Identity = 144/317 (45.43%), Postives = 190/317 (59.94%), Query Frame = 1
Query: 1 VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAVKIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPR--VQSVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
VAL H RVA++ + +GLPEV +GLLPGAGGTQRLPR+V E +L MI G ISA KA GLVD +V D + AA AFA R+ + R+ D S V A A K RG + + +EA++AAT + G+ ER LF++L QS A RHLF AERA A++I PR V SVGVIGAGTMG GI + FL AG+ V LV+ +Q LD+G+A +++ ++A + ++S+ E LL P L ++A DCDL++EAVFE M +KK IF LDS+ K A+L TNTS LD+
Sbjct: 104 VALGAHYRVAARGSKLGLPEVKLGLLPGAGGTQRLPRVVGVEAALEMIAKGDPISAEKAQSLGLVDELVEADK--LRDAAIAFARARIADGP-------RRTGARTDKLSADAEVFHAFAQKNARRFRGMDAPQACIEAVKAATEKPLSEGLKLERELFTKLMTGDQSAALRHLFFAERA-AAKIDDIAKDTPRKTVSSVGVIGAGTMGGGITMNFLSAGIPVTLVEREQAALDRGVATIRKNYEASAAKGRLSQDQVEKAMALLTPTLEMDALSDCDLIIEAVFELMRIKKEIFTALDSIAKKDAILATNTSYLDV 410
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Match: UPI00146D3856 (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=Sneathiella aquimaris TaxID=2599305 RepID=UPI00146D3856) HSP 1 Score: 222 bits (566), Expect = 1.260e-63 Identity = 134/322 (41.61%), Postives = 192/322 (59.63%), Query Frame = 1
Query: 4 ALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTGKMISAAKALEAGLVDYVVAPDTSDIVGAAAAFAHRRLPEVAGGLSALCTRSRLLKDPTSKILAVCDAAAV------KIGPPVRGAEPLWSSVEALRAATGGDFARGMATERWLFSRLFQSQQSRARRHLFLAERAGASRIPHTPAAPPRVQ--SVGVIGAGTMGAGIAIAFLFAGMQVILVDAKQENLDKGLAYVQRGVLSAARRAKISKKTGEAVKTLLIPALSIEATKDCDLVVEAVFESMGLKKRIFKELDSLCKASAVLCTNTSTLDI 945
AL CH RVAS +A +GLPEV +G+LPGAGGTQRLPR+V M+L MIT+G I A KALE GLVD + D+ A AFA + + E + + D K+ A D + I R E + ++A++A+T F G+ ER LF L + +QS ++R+ F AER A++IP P P + VG+IGAGTMG GIA+ FL AG+ V +V+ QE LDKG+A +++ + + ++S++ + +LL P +E KD D+V+EA+FE+M +KK +F +LD +CK A+L TNTSTLD+
Sbjct: 110 ALGCHYRVASPKAQVGLPEVKLGILPGAGGTQRLPRVVGIPMALEMITSGNPIKADKALEVGLVDEIA---DGDLKSTAIAFAEKVVAEGRPLIK--------ISDRDEKLQAAKDNPGIFDDFRKSIARKARNFEAPENCIKAVQASTELPFPEGLKRERELFIELMEGEQSISQRYFFFAERQ-AAKIPDVPKDTPLIDINKVGIIGAGTMGGGIAMNFLQAGIPVTIVETTQEALDKGVALIEKNYAATVSKGRMSREAMDKCMSLLSPTTELEDVKDVDIVIEAIFENMDVKKELFAKLDGICKDGAILATNTSTLDV 419 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12734.1722.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12734.1722.1 >prot_H-paniculata_contig12734.1722.1 ID=prot_H-paniculata_contig12734.1722.1|Name=mRNA_H-paniculata_contig12734.1722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=315bp VALACHLRVASQRASIGLPEVLIGLLPGAGGTQRLPRLVDAEMSLSMITTback to top mRNA from alignment at H-paniculata_contig12734:2079..7088+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12734.1722.1 ID=mRNA_H-paniculata_contig12734.1722.1|Name=mRNA_H-paniculata_contig12734.1722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5010bp|location=Sequence derived from alignment at H-paniculata_contig12734:2079..7088+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12734:2079..7088+ >mRNA_H-paniculata_contig12734.1722.1 ID=mRNA_H-paniculata_contig12734.1722.1|Name=mRNA_H-paniculata_contig12734.1722.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1890bp|location=Sequence derived from alignment at H-paniculata_contig12734:2079..7088+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |