mRNA_H-paniculata_contig9470.17219.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9470.17219.1
Unique NamemRNA_H-paniculata_contig9470.17219.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: D8LGS1_ECTSI (Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS1_ECTSI)

HSP 1 Score: 678 bits (1749), Expect = 1.030e-236
Identity = 305/440 (69.32%), Postives = 353/440 (80.23%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTDRSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWFARLSEARK 1320
            RY+EDADL KAAGFDG+R+SFAWSRIYPEGEGD PN +G+QHYHDV+D+L++RGLEPVVTLYHWDLPQALEDKYGGW    I+ AF  YADTCF+EYG KVK W+TINEPWSF HHGYS+G HAPGRC++R+ C EGDSF EPY+  HN + +HA AVS YR KYK EQ G+IGMTLN DW  PLDP+SD DKA AER+ EF++ W+ADP+YFGDYP  M+D VG RLP FT+EE  L+ GSNDFFG NHYTSWY TDIPD DPPR GTSPAKA AAGI LP TP GDGW  DI  IQTK DL+G MNG    +DWLT  P GFR  L WV+ RYGRP I +TENG+DR GE  M +E+A+ D  R  +Y  Y+  MV+A++ED VDVRGYYAWS+LDNFEWSDGY PRFGLT++DYDNG  R PKDSSKWFA L++AR+
Sbjct:   42 RYEEDADLTKAAGFDGFRMSFAWSRIYPEGEGDEPNAEGIQHYHDVIDSLLERGLEPVVTLYHWDLPQALEDKYGGWLNESIVPAFDAYADTCFREYGGKVKKWITINEPWSFVHHGYSTGGHAPGRCSNRTHCDEGDSFTEPYIAGHNVLNSHARAVSTYRTKYKAEQRGIIGMTLNCDWAVPLDPDSDADKATAERFVEFQLAWWADPIYFGDYPQVMKDLVGDRLPVFTEEESALIAGSNDFFGLNHYTSWYYTDIPDEDPPREGTSPAKARAAGITLPETPPGDGWSMDIGAIQTKMDLNGTMNGGAAATDWLTIAPEGFRPLLVWVASRYGRPIIFVTENGVDRAGEDEMELEEALKDEARQSYYHGYITSMVTAMVEDAVDVRGYYAWSILDNFEWSDGYRPRFGLTFVDYDNGQARYPKDSSKWFASLAKARR 481          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A6H5JDJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDJ5_9PHAE)

HSP 1 Score: 673 bits (1737), Expect = 1.860e-234
Identity = 307/443 (69.30%), Postives = 353/443 (79.68%), Query Frame = 1
Query:    4 YDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTDR----SSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWFARLSEARK 1320
            Y+EDADL KAAGFDG+R+SFAWSRIYPEGEGD PN +G++HYHDV+D+L++RGLEP+VTLYHWDLPQALEDKYGGW    I+ AF  YADTCF+EYG KVK W+TINEPWSF HHGYS+G HAPGRC++R    + C EGDSF EPY+  HN + +HA AVS YR KYK EQ GVIGMTLN DW  PLDP+SD DKA AER+ EF++ W+ADP+YFGDYP  M+D VG RLP FT+EE  L+ GSNDFFG NHYTSWY TDIPD DPPR GTSPAKA AAGI LP TP GDGW  DI  IQTK DL+G MNG    +DWLT  P GFR  L WV+ RYGRP I ITENG+DR GE  M +E+A+ D  R  +Y  Y+  MV+A++ED VDVRGYYAWS+LDNFEWSDGY PRFGLTY+DYDNGL R PKDSSKWFA L+EAR+
Sbjct:   64 YEEDADLTKAAGFDGFRMSFAWSRIYPEGEGDEPNAEGIRHYHDVIDSLLERGLEPMVTLYHWDLPQALEDKYGGWLNESIVPAFEAYADTCFREYGGKVKKWITINEPWSFIHHGYSTGGHAPGRCSNRQVDLTHCDEGDSFTEPYIAGHNVLNSHARAVSAYRTKYKAEQRGVIGMTLNSDWAAPLDPDSDADKATAERFMEFQLAWWADPIYFGDYPQVMKDVVGDRLPVFTEEESALIAGSNDFFGLNHYTSWYYTDIPDEDPPREGTSPAKARAAGITLPETPPGDGWAMDIGAIQTKMDLNGTMNGGAAATDWLTIAPEGFRPLLVWVASRYGRPIIFITENGVDRAGEDEMELEEALKDEARRSYYHGYITSMVTAMVEDAVDVRGYYAWSILDNFEWSDGYRPRFGLTYVDYDNGLARYPKDSSKWFASLAEARR 506          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A1R3HNK9_9ROSI (Glycoside hydrolase, family 1 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HNK9_9ROSI)

HSP 1 Score: 431 bits (1107), Expect = 1.560e-141
Identity = 210/436 (48.17%), Postives = 284/436 (65.14%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTDRSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDL-DGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWFARL 1305
            RY ED  L K  G D YR S AWSRI+P G G++ N  GV HY+D+++ALI +G+EP VTLYHWDLPQAL+DKY GW  P+II+ F  YA+TCF+++GD+VK W+T NEP +F   GY SG  APGRC+    C  G+S  EPY+VAHN +L+HA    +YR+ YK +Q G+IG++L++ W +P +  +  D   A+R ++F++GWF DPL FGDYP SM+ RVGSRLP+FTD E  L+ GS DF G NHYT++Y              +   +I   +   VT      +QDI L        DG+  G    S WL  VP G RS + ++ ++YG P + ITENGMD      + IEDA+ D  RIK++ +YL  +++AI+EDG +V+GY+AWSLLDN+EW  GY  RFGL ++DY++ L R PKDS  WF + 
Sbjct:   84 RYVEDIQLMKDMGMDAYRFSIAWSRIFPNGSGEI-NQAGVDHYNDLINALIAQGIEPYVTLYHWDLPQALQDKYIGWLDPQIIKDFSVYAETCFEKFGDRVKHWITFNEPHNFAIQGYYSGFEAPGRCSS-ILCNAGNSSSEPYIVAHNVLLSHATVADIYRKNYKDKQNGLIGISLDVKWYEP-ETNATGDIEAAQRAQDFQLGWFLDPLMFGDYPSSMKSRVGSRLPNFTDSESVLLKGSLDFLGINHYTTYYARQ-----------NATNSIVDLLNDCVTDAAAYAIQDIALFNISAAFKDGQPIGDRANSIWLYIVPSGMRSLMQYIKEKYGNPLVFITENGMDDPNSIFIPIEDALKDEKRIKYHTDYLTNLLAAIVEDGCNVKGYFAWSLLDNWEWVAGYTSRFGLYFVDYNDNLKRYPKDSVSWFKKF 505          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A1R3HNG0_9ROSI (Glycoside hydrolase, family 1 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HNG0_9ROSI)

HSP 1 Score: 427 bits (1098), Expect = 1.890e-141
Identity = 208/434 (47.93%), Postives = 278/434 (64.06%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTD--RSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWF 1296
            RY +D  L K  G D YRLS AWSRI+P G G++ N  GV HY+++++AL+ +G+EP VTLYHWDLPQAL+D+Y GW   +IIQ F  YA+TCF+++GD+VK W T NEP SFT  GY +G+HAPGRC+   R  C  G+S  EPY+VAHN +LAH   V +YR+KYK +Q G IG++ N+ W +P +  S +D    +R ++F++GWF DPL FGDYP SMR RVGSRLP F+  E  L+ GS DF G NHYT++Y +            +   AIA      + P+GD                         S WL  VP G RS + ++ ++YG PP+ ITENGMD      + I+DA+ D  RIK++ +YL  +++AI EDG +V+GY+ WSLLDNFEWS GY  RFGL ++D+ + L R PKDS KWF
Sbjct:   20 RYVDDIQLMKDMGMDAYRLSIAWSRIFPNGTGEI-NQAGVDHYNNLINALLAKGIEPYVTLYHWDLPQALQDRYNGWLDRQIIQDFAAYAETCFQKFGDRVKHWTTFNEPQSFTVQGYDTGLHAPGRCSIVFRLLCKAGNSATEPYIVAHNVLLAHGAVVDIYRKKYKAKQHGSIGLSFNVMWFEP-ETNSTKDIEATQRAQDFQLGWFLDPLMFGDYPSSMRIRVGSRLPKFSKAESNLLKGSLDFVGINHYTTYYAS-----------ANSTNAIAL---KNLKPIGD----------------------RANSIWLFIVPRGMRSVMNYIKEKYGNPPVFITENGMDDPNSILIPIKDALKDEKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNFEWSAGYSSRFGLYFVDFKDNLKRYPKDSVKWF 415          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: UPI001C4F8AF6 (beta-glucosidase 40 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F8AF6)

HSP 1 Score: 430 bits (1106), Expect = 3.150e-141
Identity = 208/437 (47.60%), Postives = 281/437 (64.30%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTD--RSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWFARL 1305
            RY+ED +L K  G D YR S AWSRI+P G G++ N  G+ HY+++++AL+ +G+EP +TLYHWDLPQAL DKY GW  P+II+ F  YA+TCFK +GD+VK W+T NEP +F+  GY  G  APGRC+      C  G+S  EPY+VAH+ +LAHA    +YR++YK +Q G++G++ ++ W  P+   S ED   A+R ++F++GWF DPL+FGDYP SM+ RVG+RLP F+  E  LV GS DF G NHYT++Y  +                   GI L  +    G     D +  K   DGK  G +  S WL   P G RS + ++  +YG PP+ ITENGMD      +SI+DA+ D  RIK++  YL+ +++AI EDG DVRGY+ WSLLDN+EW+ GY  RFGL ++DY N L R PKDS KWF  L
Sbjct:   88 RYNEDIELMKDMGMDAYRFSIAWSRIFPNGSGEI-NQAGIDHYNNLINALLAKGIEPYITLYHWDLPQALADKYNGWLHPQIIEDFANYAETCFKNFGDRVKHWITFNEPHTFSVQGYDVGFQAPGRCSILFHLFCRAGNSATEPYIVAHHILLAHATVADIYRKRYKHKQHGLVGISFDVIWFVPM-KNSSEDVEAAQRAQDFQLGWFMDPLFFGDYPSSMKSRVGTRLPKFSTAEAALVKGSLDFVGINHYTTYYAQN-------------NFTNLIGILLNDSVADSG----TDTLPFK---DGKTIGEKASSIWLYSYPQGMRSLMNYIKQKYGNPPVFITENGMDDSNNIFISIKDALKDEKRIKYHSGYLSNLLAAIKEDGCDVRGYFVWSLLDNWEWTAGYTSRFGLYFVDYRNNLTRYPKDSVKWFKNL 502          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A1R3HNM2_9ROSI (Glycoside hydrolase, family 1 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HNM2_9ROSI)

HSP 1 Score: 426 bits (1095), Expect = 7.400e-140
Identity = 203/432 (46.99%), Postives = 283/432 (65.51%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTDRSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWF 1296
            RY ED  L K  G D YR S AWSRI+P G G++ N  GV HY+++++AL+ +G+EP VTLYHWDLPQAL+DKY GW  P+II+ F  YA+TCF+++GD+VK W+T NEP +F   GY  G+ APGRC+    C+  ++  EPY+VAHN +L+HA    +Y++ YK +Q G+IG++L++ W +P D  + ED    +R ++F++GWF DPL FGDYP SMR RVGSRLP FT+ E  L+ GS DF G NHYT++Y              +   ++A  +   VT        D       F+ DG   G    S WL  VP G RS + ++ ++YG P ++ITENGMD   + ++ IEDA+ D  RIK++ +YL  +++AI+EDG +V+GY+AWSLLDN+EW  GY  RFGL ++DY++ L R PKDS  WF
Sbjct:   84 RYVEDIQLIKDMGMDAYRFSIAWSRIFPNGSGEI-NQAGVDHYNNLINALLAQGIEPYVTLYHWDLPQALQDKYIGWLDPQIIKDFSVYAETCFEKFGDRVKHWITFNEPHNFALQGYYFGLEAPGRCSSMR-CSFPNATTEPYIVAHNVLLSHATVADIYKKNYKDKQNGLIGISLDVMWYEP-DTNATEDIEATQRAQDFQLGWFLDPLMFGDYPSSMRSRVGSRLPDFTESESALLKGSLDFLGINHYTTFYARQ-----------NATNSVADLLNDCVT--------DAAAFVFPFNKDGNAIGDRANSMWLYIVPSGMRSLMQYIKEKYGNPLVIITENGMDDPNDSSIPIEDALKDAKRIKYHTDYLTNLLAAIVEDGCNVKGYFAWSLLDNWEWESGYTSRFGLYFVDYNDNLKRYPKDSVSWF 493          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: D8S991_SELML (Beta-glucosidase n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S991_SELML)

HSP 1 Score: 425 bits (1092), Expect = 1.890e-139
Identity = 209/444 (47.07%), Postives = 283/444 (63.74%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTDRSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWFAR-LSEARKKSV 1329
            RY ED D     G D YR S AW+RIYP+G     N +GV +Y+ ++D L+++G++P VTLYHWDLPQ L D +GGW   EI++ F  YA+TCF  +GD+VK W+T NEP  F+  GY  G+HAPGRC+DR  C  GDS  EPYL  HN IL+HA AV +YR K+K  QGGV+G+T++ +W +P+  +S +DK  ++R  EF++GWF DP +FGDYP +MR+ VG RLP FT EE++ V GS +F G NHY+S +VT      P                       D + QD   I T    +G + G +  S WL  VP G    L WVS+RY RPPI +TENGMD +    +++++ + D  RI FY++YL  ++ A  E G+D+RGY+AWSL+DNFEW+ GY  RFGL Y+DY+  L R PK S++WF R LS + K+ V
Sbjct:   80 RYKEDVDNMAEMGVDAYRFSVAWARIYPDGLEKGVNKEGVTYYNKLIDYLLEKGIKPYVTLYHWDLPQKLHDSFGGWTSQEIVKHFAAYAETCFAAFGDRVKHWITFNEPLQFSVLGYGLGIHAPGRCSDRRYCKAGDSATEPYLAGHNVILSHAAAVKIYREKFKALQGGVVGITVDAEWAEPM-TDSVDDKVASQRRLEFQLGWFLDPFFFGDYPATMREYVGDRLPKFTPEEQKSVRGSVEFVGINHYSSRFVTPALYAKP----------------------SDNYHQD-QRILTSAVRNGAVIGDKAASPWLYIVPWGLHRVLKWVSERYNRPPIYVTENGMDEENNSTLTLDEQLDDLKRIHFYQDYLTAVLQATRE-GMDIRGYFAWSLVDNFEWAMGYTKRFGLYYVDYET-LKRYPKRSARWFKRFLSNSIKQEV 497          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A6P6BI56_DURZI (beta-glucosidase 40-like isoform X1 n=2 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6BI56_DURZI)

HSP 1 Score: 424 bits (1091), Expect = 3.250e-139
Identity = 210/434 (48.39%), Postives = 279/434 (64.29%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTD--RSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWF 1296
            RY ED  L K  G D YR SFAWSRI+P G G++ N  GV HY++ ++AL+  G+EP VTLYHWDLPQALEDKY GW  P+II+ F  YA+TCFK +GD+VK W T NEP +FT  GY  G+  PGRC+      C  G+S  EPY+VAHN +L+HA AV +YR++Y+ +Q G +G++ N+ W +P +  S ED   A+R ++F++GWF DPL FGDYP SM  RVGSRLP FT  E  L+ GS DF G NHYT++Y  +              K  A G+ L  T    G         T    +GK  G +  S W+  VP G R+ + +V ++YG PP++ITENGMD      ++I+DA+ D  RIKF+ +YL  +++AI +DG +V+GY+ WSLLDN+EW  GY  RFGL ++DY + L R PKDS KWF
Sbjct:   85 RYPEDIKLMKDLGMDAYRFSFAWSRIFPNGSGEI-NQAGVDHYNNFINALLAAGIEPYVTLYHWDLPQALEDKYNGWLDPQIIKDFAMYAETCFKLFGDRVKHWTTFNEPDAFTVQGYDVGLQPPGRCSIILHLFCKAGNSATEPYIVAHNVLLSHATAVDIYRKRYQAKQHGSVGVSFNVIWYEP-ESNSTEDIEAAQRAQDFQLGWFLDPLIFGDYPSSMITRVGSRLPRFTKAESVLLKGSLDFVGINHYTTFYARE-------------NKTNAIGLILNDTVADSGAF-------TSPFKNGKPIGDKANSIWIYIVPRGMRNVVNYVKEKYGNPPVIITENGMDDANSPLITIKDALKDEKRIKFHNDYLTNLLAAIKQDGCNVKGYFVWSLLDNWEWVAGYTSRFGLYFVDYKDNLKRYPKDSVKWF 496          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A6P4MZB4_GOSAR (beta-glucosidase 40 n=15 Tax=Gossypium TaxID=3633 RepID=A0A6P4MZB4_GOSAR)

HSP 1 Score: 424 bits (1091), Expect = 3.360e-139
Identity = 212/434 (48.85%), Postives = 277/434 (63.82%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTD--RSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWF 1296
            RY ED  L K  G D YR S AWSRI+P G G++ N  GV HY++ ++AL+  G++P VTLYHWDLPQALEDKY GW  P+II+ F  YA+TCFK +GD+VK W+T NEP +FT  GY  G+ APGRC+      C  G+S  EPY+VAHN +L+HA AV +YR+KYK +Q G +G++ N+ W +P +  S ED   A+R ++F++GWF DPL FGDYP SM  RVGSRLP FT  E  L+ GS DF G NHYT++Y  +              K    G  L  T      + D       F   GK  G +  S WL  VP G RS + +V ++YG PP+++TENGMD      +SI++A+ D  RIK+  +YL  +++AI EDG +V+GY+ WSLLDN+EW  GY  RFGL +IDY + L R PKDS KWF
Sbjct:   86 RYPEDIQLMKDMGMDAYRFSIAWSRIFPNGTGEI-NQAGVDHYNNFINALLAAGIQPYVTLYHWDLPQALEDKYNGWLDPQIIKDFAMYAETCFKLFGDRVKYWITFNEPDTFTVQGYDVGLQAPGRCSIVLHLFCKAGNSGTEPYIVAHNVLLSHASAVDIYRKKYKAKQHGSVGVSFNVIWFEP-ETNSTEDTEAAQRAQDFQLGWFLDPLMFGDYPSSMITRVGSRLPRFTKAESALLKGSLDFVGINHYTTFYARE-------------NKTNLIGSILNDT------VSDSGAFTLPFK-HGKPIGDKANSIWLYIVPRGMRSLMNYVKEKYGNPPVIVTENGMDDPNSQFISIKNALKDEKRIKYLNDYLTNLLTAIKEDGCNVKGYFVWSLLDNWEWGAGYSSRFGLYFIDYKDNLKRYPKDSVKWF 497          
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Match: A0A834SSV2_9FABA (Beta-glucosidase 40 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SSV2_9FABA)

HSP 1 Score: 424 bits (1089), Expect = 7.650e-139
Identity = 206/434 (47.47%), Postives = 283/434 (65.21%), Query Frame = 1
Query:    1 RYDEDADLAKAAGFDGYRLSFAWSRIYPEGEGDVPNGDGVQHYHDVLDALIDRGLEPVVTLYHWDLPQALEDKYGGWRGPEIIQAFMKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTD--RSSCAEGDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLDPESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEERELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPVGDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYGRPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGVDVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWF 1296
            RY+ED +L K  G D YR S +WSRI+P G G + N  G+ HY+ +++AL+ +G+EP VTLYHWDLPQALEDKY GW  P II+ F  YA+TCF+++GD+VK W+T NEP +    GY  G  APGRC+      C EG+S  EPY+VAHN +L+HA    LYR+KYK +QGG IG++L++ W +P    S E+ A A+R  +F+ GWF DPL+FGDYP SMR RVGSRLP F+  +  L+ GS DF G NHYT++Y T  P+                     +T +   ++ D D +   F+    + G    S WL  VP G RS + ++ ++YG P ++ITENGMD   +  + IEDA+ D  RI+++ +YL+ ++++I EDG +V+GY+AWSLLDN+EW+ GY  RFGL +IDY + L R PKDS KWF
Sbjct:   92 RYEEDIELMKDMGMDAYRFSISWSRIFPNGSGQI-NHAGIDHYNKLINALLSKGVEPYVTLYHWDLPQALEDKYKGWLSPTIIRDFSTYAETCFEKFGDRVKHWITFNEPHNVALMGYDLGFDAPGRCSILLHQLCKEGNSATEPYIVAHNMLLSHALVADLYRKKYK-KQGGSIGISLDVIWSEPA-TNSAENSAAAQRALDFQFGWFMDPLFFGDYPKSMRRRVGSRLPKFSKSQSALLKGSLDFVGINHYTTYYATPSPN---------------------ITNLLHDYIADSDALTLPFN-GTNIIGDRANSIWLYIVPQGMRSVMNYIREKYGNPLVIITENGMDDPNDPLIPIEDALKDEKRIRYHNDYLSNLLASINEDGCNVKGYFAWSLLDNWEWTSGYTSRFGLYFIDYKDNLKRYPKDSVKWF 500          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9470.17219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGS1_ECTSI1.030e-23669.32Beta-glucosidase, family GH1 n=1 Tax=Ectocarpus si... [more]
A0A6H5JDJ5_9PHAE1.860e-23469.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1R3HNK9_9ROSI1.560e-14148.17Glycoside hydrolase, family 1 n=1 Tax=Corchorus ol... [more]
A0A1R3HNG0_9ROSI1.890e-14147.93Glycoside hydrolase, family 1 n=1 Tax=Corchorus ol... [more]
UPI001C4F8AF63.150e-14147.60beta-glucosidase 40 n=1 Tax=Macadamia integrifolia... [more]
A0A1R3HNM2_9ROSI7.400e-14046.99Glycoside hydrolase, family 1 n=1 Tax=Corchorus ol... [more]
D8S991_SELML1.890e-13947.07Beta-glucosidase n=6 Tax=Selaginella moellendorffi... [more]
A0A6P6BI56_DURZI3.250e-13948.39beta-glucosidase 40-like isoform X1 n=2 Tax=Durio ... [more]
A0A6P4MZB4_GOSAR3.360e-13948.85beta-glucosidase 40 n=15 Tax=Gossypium TaxID=3633 ... [more]
A0A834SSV2_9FABA7.650e-13947.47Beta-glucosidase 40 n=1 Tax=Senna tora TaxID=36278... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9470contigH-paniculata_contig9470:897..6449 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score527.3
Seed ortholog evalue6.6e-147
Seed eggNOG ortholog2880.D8LGS1
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188,ko:K06699
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,ko03050,map00460,map00500,map00940,map01100,map01110,map03050
Hectar predicted targeting categoryother localisation
EggNOG free text desc.beta-glucosidase activity
EggNOG OGsCOG2723@1,KOG0626@2759
EC3.2.1.21
COG Functional cat.G
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03051
Exons8
Model size1919
Cds size1299
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9470.17219.1prot_H-paniculata_contig9470.17219.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9470 1527..6087 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931178.4681127-UTR-H-paniculata_contig9470:896..11001622931178.4681127-UTR-H-paniculata_contig9470:896..1100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9470 897..1100 +
1691481625.7954872-UTR-H-paniculata_contig9470:896..11001691481625.7954872-UTR-H-paniculata_contig9470:896..1100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9470 897..1100 +
1622931178.485193-UTR-H-paniculata_contig9470:1472..15261622931178.485193-UTR-H-paniculata_contig9470:1472..1526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9470 1473..1526 +
1691481625.808089-UTR-H-paniculata_contig9470:1472..15261691481625.808089-UTR-H-paniculata_contig9470:1472..1526Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9470 1473..1526 +
1622931178.6401026-UTR-H-paniculata_contig9470:6087..64491622931178.6401026-UTR-H-paniculata_contig9470:6087..6449Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9470 6088..6449 +
1691481625.9023273-UTR-H-paniculata_contig9470:6087..64491691481625.9023273-UTR-H-paniculata_contig9470:6087..6449Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9470 6088..6449 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931178.5031707-CDS-H-paniculata_contig9470:1526..15681622931178.5031707-CDS-H-paniculata_contig9470:1526..1568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 1527..1568 +
1691481625.8175664-CDS-H-paniculata_contig9470:1526..15681691481625.8175664-CDS-H-paniculata_contig9470:1526..1568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 1527..1568 +
1622931178.5228355-CDS-H-paniculata_contig9470:2860..29521622931178.5228355-CDS-H-paniculata_contig9470:2860..2952Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 2861..2952 +
1691481625.828505-CDS-H-paniculata_contig9470:2860..29521691481625.828505-CDS-H-paniculata_contig9470:2860..2952Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 2861..2952 +
1622931178.5378637-CDS-H-paniculata_contig9470:3279..34361622931178.5378637-CDS-H-paniculata_contig9470:3279..3436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 3280..3436 +
1691481625.841046-CDS-H-paniculata_contig9470:3279..34361691481625.841046-CDS-H-paniculata_contig9470:3279..3436Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 3280..3436 +
1622931178.552654-CDS-H-paniculata_contig9470:4044..42561622931178.552654-CDS-H-paniculata_contig9470:4044..4256Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 4045..4256 +
1691481625.852726-CDS-H-paniculata_contig9470:4044..42561691481625.852726-CDS-H-paniculata_contig9470:4044..4256Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 4045..4256 +
1622931178.5693104-CDS-H-paniculata_contig9470:4691..50701622931178.5693104-CDS-H-paniculata_contig9470:4691..5070Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 4692..5070 +
1691481625.8678272-CDS-H-paniculata_contig9470:4691..50701691481625.8678272-CDS-H-paniculata_contig9470:4691..5070Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 4692..5070 +
1622931178.5818176-CDS-H-paniculata_contig9470:5381..54461622931178.5818176-CDS-H-paniculata_contig9470:5381..5446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 5382..5446 +
1691481625.8816693-CDS-H-paniculata_contig9470:5381..54461691481625.8816693-CDS-H-paniculata_contig9470:5381..5446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 5382..5446 +
1622931178.6111803-CDS-H-paniculata_contig9470:5735..60871622931178.6111803-CDS-H-paniculata_contig9470:5735..6087Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 5736..6087 +
1691481625.8938181-CDS-H-paniculata_contig9470:5735..60871691481625.8938181-CDS-H-paniculata_contig9470:5735..6087Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9470 5736..6087 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9470.17219.1

>prot_H-paniculata_contig9470.17219.1 ID=prot_H-paniculata_contig9470.17219.1|Name=mRNA_H-paniculata_contig9470.17219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=433bp
MKYADTCFKEYGDKVKTWVTINEPWSFTHHGYSSGMHAPGRCTDRSSCAE
GDSFIEPYLVAHNTILAHAHAVSLYRRKYKLEQGGVIGMTLNIDWMDPLD
PESDEDKAVAERYEEFEVGWFADPLYFGDYPPSMRDRVGSRLPSFTDEER
ELVMGSNDFFGFNHYTSWYVTDIPDMDPPRPGTSPAKAIAAGIELPVTPV
GDGWMQDIDLIQTKFDLDGKMNGMETYSDWLTGVPPGFRSALTWVSDRYG
RPPILITENGMDRKGEWAMSIEDAVHDGDRIKFYEEYLAEMVSAIIEDGV
DVRGYYAWSLLDNFEWSDGYHPRFGLTYIDYDNGLDRTPKDSSKWFARLS
EARKKSVEFPVANDLEYDEASSHHVSERSSRPMGRARSFEMVFRSAGGVF
LALLLTGLAGFKVGGGNFRVWRGGGERHYEGV*
back to top

mRNA from alignment at H-paniculata_contig9470:897..6449+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9470.17219.1 ID=mRNA_H-paniculata_contig9470.17219.1|Name=mRNA_H-paniculata_contig9470.17219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5553bp|location=Sequence derived from alignment at H-paniculata_contig9470:897..6449+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATACGATGAGGATGCTGACCTCGCCAAGGCGGCCGGATTCGACGGGTA CCGGTTGTCATTCGCGTGGAGTCGCATCTATCCAGAGGGCGAGGGTGATG TGCCGAACGGTGACGGGGTCCAGCACTACCACGACGTGCTTGACGCGCTG ATCGACAGGGGGCTGGAGCCCGTGGTGACGCTTTACCACTGGGATCTGCC GCAGGTGAGCCATTTGTTTCGTGAAAAATTTCAGGGGCTGTATTTCTCTG TTTATTCCAGTTCGTCGGATTAATATCGAACCAAATGAGAGGTTGGATTG TACTTCGGAATAACGTATATGCGTCTACCAGACTTCGACTTTCGAAGGAT TCCAACCGCAGCCTCTGAACAGTCTTAGATCTGGAGATCATGATCTGCCA AATCCAGCCGACTTCACTTACTTATCGAACAGAGGACGCAGAGTCTAAAG TGTTTGGGATCCAGGGTGGCAGGGAGGACTTGTTGTTTGCGAAACCTGTT GATCTCCGACCTTTGTGGTGCTTTCCTATTTGCCCTTTATTGATGTTTTT TGGTGCGTGCACACCCTTTTCGGCAGGCCCTGGAAGACAAATATGGTGGC TGGCGAGGTCCCGAGATCATACAGGCCTTCATGAAATATGCAGACACTTG CTTCAAGGAGTATGGTGACAAGGTGAGCCAATTTCTAGTTCTTTCTTTCC TACCTATCTCTTATTTGCTGAGTCGCGAGACGCTTCACGGAGTCAAAGAA GGGGGGCGTAATAGAAACATTTATATTTCCGTTTTAAGTGGCCCTGCGCC CCGGATTCGCGAGCGGAGGCGTCTCTCGCGTCTTGCAGCGGAGAGCGTGT GCGAGCAGCGCCAGTGTTTGATGTGTACACTGACACCGCACCCTGACCAT GAGTAAATGGTTGACCGGCGACTTGACGCAAGAGTGACGCGAGCGTTCTT TTCTGGAAGCGGACGCGTTTGGTTTTATAGTGATACACAAGTGATGGGAG TCCCACAAAACATTGGAATAGATCGCAAACACAACAGTAACATAGTAGCT CTCCACACGTGCCATGTAGATTACTGTGCTGCACAGTATATTGACTGAGC TCTTTGTACACATTACCGTGCGTTGTCCTGTACTACAGTACCGTGTATTT TTTTAATGGCATTAAATGATACTAAAATTGCGACAAATTATGTCCGTAAA AACATGCAGAGTATTTTCATAGTTAGTTCCAGTAGTAGCACATGAAATAC GGGCCTGTGTCAGATGCTCCGGCGTAGACCACAAAATACTGTACTGTCTG TAGACAATTAATTTGCGACGTAGTCAAATACTCCGACACTCCCTCGTCTA CATAGATGACATGATATTCTGTGCCATGTATGCACTGTACTGACTCAACG GTACACTCTATACATGCGTACCATCCTGTAATAAGTGTGATTCCCATGTT GACGTTTCCGAACCGTTCCAGTTCTTTTTTGTCATCAACTTTTATGTAGA CATGTAGTATCCACATGTTGACAAATGAACATGGATAGTGACTGTCTCAT GAACTGCGGCTTGCTCCCGTTAGATGCTTCGGCACAGACCTCCTGGTCCA CTTGGCAATCCCTTCGTTCTCCACGTCCCAAAGAGAGAACATATATATAT ATATATATATATATATATATATATATATACTGTATTACCTATAAGGGGGG AGTAACACACTTACCACAGTATACTGGGCTCAGTACGCTTGCCGTACTTG CTATACTCTGACGTTATGCAGCCTGACTGAAGTGAAGTTGTGTATACCTG ACAGCAAAATTAGGACAAGTAGGGGGAGGTAGAGGGTTACTGGTGAACTT AGAGCTGGCAACTATATGCCGTGTCGATTCCGTTTTTCGTGCGCTAGGAA CCGTCTTGCCAGCGGGCTCAACTTGTACCTCGTTTCATTCGTTCGAACGC CCCTTCGTGTTCAGGTGAAGACGTGGGTCACGATTAACGAGCCATGGTCT TTCACTCACCACGGGTACTCTTCTGGAATGCACGCACCAGGGCGCTGCAC GGACAGGTGACCAGGTGTAGCAGCGGATCGAGAAGTCCCAGCTCATTATA CGGTGTGATGTGCTGCAGAAGTCAGGCGAAAGTATGTAATAGAAGCCATT ATCCATTTTGCTGTGGGCGTACGCTGGCATACATACGACTTCTTACGCAG ACCGTATTTTCACGTTTTAGATCTTCCTCTTTTTACACCAATGCAACCGC GAGTAGATGGGTGTATTGCATGTCACTTTTTTAAGCCGCCTGTTCTTTGT TCGTGTTCTCACTCTACACCGGTACAATTGCGACTACACGTACTTGAATG CTTTGCGAAATGCTACCGCTTTCCATCAACCAGGAGCAGCTGCGCCGAAG GCGACAGCTTCATAGAGCCGTACCTGGTCGCGCACAACACCATCCTTGCG CACGCTCACGCGGTGTCCTTGTACCGTCGGAAGTACAAGCTGGAGCAGGG TGGAGTCATTGGCATGACGCTTAACATCGACTGGATGGACGTGAGAACTG TGCGCCGAATTTGGCGGTGATGGTTTGCTGCAGGTGTTGGCCACGCTTGT GCTGAAGGGTAGGGACATCAACTTAAGAGAGGCCTCAAGACTCGAGAATA ATTATATCGGGGCTGGGATATCTTTCTCCGTAACCCGGTGGTGATGCGTG TGAGGTCTATCGTATAGCTACACGCACGGATTTTAGCTTTCTCTTATCAA AACCGAGCTCACGAGTAAGACATCCCAACCTTATATCGAGGTGAAACGTT TTGCTGGTCTCCCATAGCTCACGACGCCTCCCGCGCTAAAACGTGCCGCA GAGTGCTCGTCGAACGTTCGTTCGTTTTTGATGATTGTTCGACCGTGCGG ACTGCAAGAATGTGTTTGGAAGAGAAGGCTTATTACCTACACCCTCCTCC CCTCTTAGATGTATTGTGCGAGGGGCATAGAATCATATCCATTAGGTTGC AACGCGAAATGCGCATATTAGTCCTTATATGGTTTGTTGTCGCGATAGAA GAACGTAGGTACCTTTCGATTATTGGCGGCGCTCCTCTTGCTCCTTTTAT ACTGATATTAACCCCTCGTACATGCGCCGACCTTCTCTATTGTTTTAGCC GCTCGATCCCGAGTCGGATGAAGACAAAGCCGTGGCGGAGCGTTACGAGG AGTTTGAGGTGGGGTGGTTCGCCGATCCCCTTTATTTCGGTGACTACCCG CCCTCCATGAGGGACAGGGTTGGTTCGCGGCTACCTAGTTTCACCGATGA AGAACGAGAATTGGTCATGGGCAGCAACGATTTCTTCGGGTTTAACCATT ACACTTCTTGGTGCGTACCGCTGGCATTTTGTATTGGTAAAGGCGTAAAT AGATTCGCCTCCTGTTTGTAGCACGTAACAAGGGTCGCACACGTCGTTGC ACAAACAAGCACGATCAGCCCAAAGGGCTCAGCGTCTAGAACAATATGCA GCTAACCGTTGCGTGTGTTCTTTTGCACCCGCGACATTCAATTGTACCGC TCCACGGCATGTTGCCGGCGTTGATTGGAGCGTAGACCCGCCGACGGTCA TATTTGTTTCGTGTTCGGAGTGTCAACCGTCGCTAACTCTCAACGACGCA AAGCGTTTTTTTAGGATCCTTTCTTCCCTATCAACAAGACACCACAAACA ACCCCGACCCTCAGTTTTGAAATTGCCCCTCCTCTCCAAAACTCATACTC ACTCTGTACCATGGCTCACCGTTTCTTTGCCGTTGCGGGCACCAGGTACG TCACCGACATCCCGGACATGGACCCACCACGACCAGGAACCTCTCCCGCG AAGGCGATAGCAGCAGGAATAGAGCTTCCGGTCACCCCGGTGGGCGACGG GTGGATGCAGGACATTGACCTGATTCAGACCAAGTTCGACCTCGACGGAA AGATGAACGGAATGGAGACCTACTCGGATTGGCTCACGGGGGTGCCGCCC GGGTTTAGATCGGCGCTCACCTGGGTGTCCGATCGCTACGGGCGTCCCCC AATCTTGATAACGGAGAACGGCATGGACCGAAAGGGGGAGTGGGCGATGT CGATCGAGGATGCTGTACACGACGGCGACAGGATCAAGTTTTACGAGGAA TATCTTGCCGAAATGGTCTCTGCGGTGAGACAGAGTCGCGTGCGCTTAGG AATTGCGTTTATTTACTTTCCTAGCCTTCCCCCCCGCCCCCCGCCCCCCG CCAAGTCGCATCTAGGTGTAGCGTTGGTAAACCATTGGCCCGATCAGCGT GGTATATTTAACACTCGCTAGTATATATGCCACCTCGCATTTGCTTTCGA GAAATTGTGCTGATACGGCGTCCAGAAGATACGTGTGAACTTGGAAGTTT CTCGCTCAGTATTGGCGACCGTTCCTTGCCAAAATGCTCTTCGTCTCTCC CCCGCCATCCTGCCGTGTGTCCCTGCTCCCCCAAGATTATAGAGGATGGC GTGGATGTGCGAGGCTACTACGCGTGGAGCCTGCTGGATAATTTCGAGTG GTGAGCGCACGGACAAGTTGGTCAATCGCCATCATGCAGTTTTGGTGCGC GAAATGTGATGCTACTGAGTAAAATGTTCACGAACCGAAAGGTGTTACGA GGTAGTATTTCAGAATATGTTGGAACTACATGATCCGTGGAGATGTGCTC GGAACGTGAAAACAAATCAGAAAATAATCGACTTGTGTGAAAGGAGAGTG TTGACCTCGAAGGACACTTTGGGGAACCATCCCCCTCACGTTCCTTCCAC AATTGACATTTTATGTTTTTAACCGTTTGTTTCATTCAGGTCGGATGGCT ACCACCCGCGCTTTGGCCTCACTTATATTGACTACGATAACGGCCTGGAT CGCACGCCGAAAGACTCGTCGAAGTGGTTTGCTCGCTTATCCGAGGCTCG CAAAAAGAGCGTCGAATTTCCTGTGGCGAACGATCTCGAGTACGATGAGG CCTCTAGCCACCATGTTTCGGAGAGATCCAGTCGGCCAATGGGGCGGGCA AGGAGCTTTGAGATGGTGTTTAGGAGTGCCGGCGGGGTGTTTTTGGCTTT ACTGCTGACTGGGCTGGCCGGCTTCAAGGTCGGGGGTGGCAATTTTAGGG TTTGGAGAGGCGGCGGAGAAAGACATTATGAGGGTGTGTGATTTTGTGTT TTCATCCGTTTTGCGTATCATTCAGCGGATCGGGGGTGAGCGAGTCCATG AAGTCGCTGGGTGCATTTAAGAGGAAGTGTTTTTCTTAGTACATATTCAA CCACTACGACACAAGGGTTGTGGTAGTCGAGTCGTTGTGTTGGTCATGGC CTGCTTTCTCAATAAATCGGATCAGTCGACTGTGGTCAGGTTCATTTTGA GGAATTGGTCCCACCCGTCGACTGTAGTCGACTTCTTCGGATTGATTTAC TCGGATCGGTGGACTAACTGTGGCTCATTTGTAATCGAATGCATTTTTTT TGCGCTCGATGCACTTTCTGCAGTTCTCGGCTGTTCTTTGTGGGTTGCGT ATG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9470:897..6449+

>mRNA_H-paniculata_contig9470.17219.1 ID=mRNA_H-paniculata_contig9470.17219.1|Name=mRNA_H-paniculata_contig9470.17219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at H-paniculata_contig9470:897..6449+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAATATGCAGACACTTGCTTCAAGGAGTATGGTGACAAGATGAAATA
TGCAGACACTTGCTTCAAGGAGTATGGTGACAAGGTGAAGACGTGGGTCA
CGATTAACGAGCCATGGTCTTTCACTCACCACGGGTACTCTTCTGGAATG
CACGCACCAGGGCGCTGCACGGACAGGTGAAGACGTGGGTCACGATTAAC
GAGCCATGGTCTTTCACTCACCACGGGTACTCTTCTGGAATGCACGCACC
AGGGCGCTGCACGGACAGGAGCAGCTGCGCCGAAGGCGACAGCTTCATAG
AGCCGTACCTGGTCGCGCACAACACCATCCTTGCGCACGCTCACGCGGTG
TCCTTGTACCGTCGGAAGTACAAGCTGGAGCAGGGTGGAGTCATTGGCAT
GACGCTTAACATCGACTGGATGGACGAGCAGCTGCGCCGAAGGCGACAGC
TTCATAGAGCCGTACCTGGTCGCGCACAACACCATCCTTGCGCACGCTCA
CGCGGTGTCCTTGTACCGTCGGAAGTACAAGCTGGAGCAGGGTGGAGTCA
TTGGCATGACGCTTAACATCGACTGGATGGACCCGCTCGATCCCGAGTCG
GATGAAGACAAAGCCGTGGCGGAGCGTTACGAGGAGTTTGAGGTGGGGTG
GTTCGCCGATCCCCTTTATTTCGGTGACTACCCGCCCTCCATGAGGGACA
GGGTTGGTTCGCGGCTACCTAGTTTCACCGATGAAGAACGAGAATTGGTC
ATGGGCAGCAACGATTTCTTCGGGTTTAACCATTACACTTCTTGCCGCTC
GATCCCGAGTCGGATGAAGACAAAGCCGTGGCGGAGCGTTACGAGGAGTT
TGAGGTGGGGTGGTTCGCCGATCCCCTTTATTTCGGTGACTACCCGCCCT
CCATGAGGGACAGGGTTGGTTCGCGGCTACCTAGTTTCACCGATGAAGAA
CGAGAATTGGTCATGGGCAGCAACGATTTCTTCGGGTTTAACCATTACAC
TTCTTGGTACGTCACCGACATCCCGGACATGGACCCACCACGACCAGGAA
CCTCTCCCGCGAAGGCGATAGCAGCAGGAATAGAGCTTCCGGTCACCCCG
GTGGGCGACGGGTGGATGCAGGACATTGACCTGATTCAGACCAAGTTCGA
CCTCGACGGAAAGATGAACGGAATGGAGACCTACTCGGATTGGCTCACGG
GGGTGCCGCCCGGGTTTAGATCGGCGCTCACCTGGGTGTCCGATCGCTAC
GGGCGTCCCCCAATCTTGATAACGGAGAACGGCATGGACCGAAAGGGGGA
GTGGGCGATGTCGATCGAGGATGCTGTACACGACGGCGACAGGATCAAGT
TTTACGAGGAATATCTTGCCGAAATGGTCTCTGCGGTACGTCACCGACAT
CCCGGACATGGACCCACCACGACCAGGAACCTCTCCCGCGAAGGCGATAG
CAGCAGGAATAGAGCTTCCGGTCACCCCGGTGGGCGACGGGTGGATGCAG
GACATTGACCTGATTCAGACCAAGTTCGACCTCGACGGAAAGATGAACGG
AATGGAGACCTACTCGGATTGGCTCACGGGGGTGCCGCCCGGGTTTAGAT
CGGCGCTCACCTGGGTGTCCGATCGCTACGGGCGTCCCCCAATCTTGATA
ACGGAGAACGGCATGGACCGAAAGGGGGAGTGGGCGATGTCGATCGAGGA
TGCTGTACACGACGGCGACAGGATCAAGTTTTACGAGGAATATCTTGCCG
AAATGGTCTCTGCGATTATAGAGGATGGCGTGGATGTGCGAGGCTACTAC
GCGTGGAGCCTGCTGGATAATTTCGAGTGATTATAGAGGATGGCGTGGAT
GTGCGAGGCTACTACGCGTGGAGCCTGCTGGATAATTTCGAGTGGTCGGA
TGGCTACCACCCGCGCTTTGGCCTCACTTATATTGACTACGATAACGGCC
TGGATCGCACGCCGAAAGACTCGTCGAAGTGGTTTGCTCGCTTATCCGAG
GCTCGCAAAAAGAGCGTCGAATTTCCTGTGGCGAACGATCTCGAGTACGA
TGAGGCCTCTAGCCACCATGTTTCGGAGAGATCCAGTCGGCCAATGGGGC
GGGCAAGGAGCTTTGAGATGGTGTTTAGGAGTGCCGGCGGGGTGTTTTTG
GCTTTACTGCTGACTGGGCTGGCCGGCTTCAAGGTCGGGGGTGGCAATTT
TAGGGTTTGGAGAGGCGGCGGAGAAAGACATTATGAGGGTGTGTGAGTCG
GATGGCTACCACCCGCGCTTTGGCCTCACTTATATTGACTACGATAACGG
CCTGGATCGCACGCCGAAAGACTCGTCGAAGTGGTTTGCTCGCTTATCCG
AGGCTCGCAAAAAGAGCGTCGAATTTCCTGTGGCGAACGATCTCGAGTAC
GATGAGGCCTCTAGCCACCATGTTTCGGAGAGATCCAGTCGGCCAATGGG
GCGGGCAAGGAGCTTTGAGATGGTGTTTAGGAGTGCCGGCGGGGTGTTTT
TGGCTTTACTGCTGACTGGGCTGGCCGGCTTCAAGGTCGGGGGTGGCAAT
TTTAGGGTTTGGAGAGGCGGCGGAGAAAGACATTATGAGGGTGTGTGA
back to top