mRNA_H-paniculata_contig947.17218.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig947.17218.1
Unique NamemRNA_H-paniculata_contig947.17218.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: D7FKR6_ECTSI (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR6_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 1.150e-175
Identity = 236/298 (79.19%), Postives = 263/298 (88.26%), Query Frame = 1 
Query:    1 MGVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEVPEKFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            MGVEG  C+VTGGSG  G+RLVEML E+GA+RVVSFDIAPKP DAMEH AIEY QG+LT  +DV+KACEGADCVWH+AALVGPFH KE YMAVNY GSLNVL ACRK+GVGKLIMSSSPSTRFDGNDIDGLKE ELE P+KFLQ+YAESKA GE AVLEACSDSL TVAIAPHQIYGPRDNLF+P +LE AGKGQLR+FGNGKN+VSFTY+DNYCH LILG DALY+GSPALG FYIVTDGGWQ FW VI+ AGM +GF+ LF K++LP  +M+ VGY+C  IGW+LGRKLRV+PFTV
Sbjct:    1 MGVEGAVCMVTGGSGLTGRRLVEMLAEKGAARVVSFDIAPKPADAMEHPAIEYQQGNLTIPDDVDKACEGADCVWHVAALVGPFHAKEAYMAVNYQGSLNVLEACRKHGVGKLIMSSSPSTRFDGNDIDGLKEDELEYPKKFLQLYAESKAKGEVAVLEACSDSLLTVAIAPHQIYGPRDNLFMPSLLEAAGKGQLRVFGNGKNKVSFTYLDNYCHGLILGYDALYQGSPALGNFYIVTDGGWQYFWRVIDGAGMAMGFKSLFDKMKLPTLLMVPVGYVCAGIGWILGRKLRVNPFTV 298
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A7S3Y444_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y444_HETAK)

HSP 1 Score: 432 bits (1110), Expect = 1.830e-149
Identity = 201/297 (67.68%), Postives = 243/297 (81.82%), Query Frame = 1 
Query:    4 GVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEVPEKFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            GV+G+  VVTGGSGF GQRLVEMLVERGA RVVSFDIAPKP DA++H AIEY+QGDLT  + VNK C+GADCVWHIAALVGPFH KE Y+ VNY G++N++NACR +GV KL+ SSSPSTRFDG+DIDGLKES++  P+KFL++YAE+KAMGE+AV EACS  L TVAIAPHQ+YGPRD LFLP +LE  G G+LR+FG G+N+VSF ++DNY H LILG DALY+ SPAL KFYIVTDG  Q FW V++ AG  +GF  LF K  LP  +++GV YI   +GW+LGR+ +V+PFTV
Sbjct:    7 GVKGITAVVTGGSGFVGQRLVEMLVERGAKRVVSFDIAPKPLDALDHRAIEYVQGDLTNPDVVNKICKGADCVWHIAALVGPFHKKEAYVKVNYDGTINIINACRAHGVKKLVYSSSPSTRFDGSDIDGLKESQMSYPKKFLELYAETKAMGERAVFEACSPELRTVAIAPHQVYGPRDTLFLPNLLEAIGNGKLRVFGRGENKVSFCHVDNYAHGLILGYDALYEHSPALAKFYIVTDGPPQKFWRVLDAAGQAMGFTSLFRKFHLPVFLLMGVAYILELLGWMLGRRFKVNPFTV 303
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A7S2UZ88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ88_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 4.950e-142
Identity = 192/302 (63.58%), Postives = 247/302 (81.79%), Query Frame = 1 
Query:    1 MGVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGAD----CVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEVPEKFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            MGV+G+NCVVTGG+GF GQRLVEMLVERGA+ VVSFD+ PKP DA+E   I Y+QGD++K  DVN A + A     CVWHIAALVGP+H K+ YMAVNY G+LNV+ ACR++ VG+L+MSSSPSTRFDGNDI+GL   +L++P+KF+Q+YAE+KAMGEKA  +AC D+L TVAIAPHQ+YGPRD+LFL  +L P G G+LRIFG+GKN VSF ++DNYCH LILG DAL+KGSPALG+FYIVTDG  Q FW VI+ AG+ +GF+ L++K  LP  +++ + +IC+F+G +L RK +++PF+V
Sbjct:    1 MGVQGINCVVTGGTGFVGQRLVEMLVERGAAHVVSFDVRPKPEDALESKKITYVQGDISKASDVNDAVKAAGTTIHCVWHIAALVGPYHQKDAYMAVNYKGTLNVIQACRQFKVGRLVMSSSPSTRFDGNDIEGLGVEDLKIPDKFVQIYAETKAMGEKACRDACCDTLMTVAIAPHQVYGPRDSLFLNNLLHPIGNGKLRIFGSGKNMVSFCHVDNYCHGLILGYDALHKGSPALGRFYIVTDGPPQQFWKVIDQAGVAMGFRSLWTKFHLPIMLLMVLAHICDFLGMLLNRKFKLTPFSV 302
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A835Z5A6_9STRA (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A6_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 4.700e-139
Identity = 187/297 (62.96%), Postives = 241/297 (81.14%), Query Frame = 1 
Query:    4 GVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEVPEKFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            GV G+  VVTGGSGF GQRLVE+LVERGA+RVVSFD+A KP DA+    I Y++GD+T    V  A +GADCVWHIAALVGPFHD+  Y+AVNYHGS+NVL ACRK+G+ KL+MS SPSTRFDGNDIDGL E++L+ P+K+LQ+YAE+KA+ E+ +L AC D L T++IAPHQ+YGPRD+LFL  +L  AG+G+LRIFG G N+ SFTY+DNYCH LILG DAL  GSPALGKFYIVTDGG+Q+FW V+++A + +GF  +++K +LP  +++ + YICN IG++L  K+R++PF V
Sbjct:    3 GVAGIKAVVTGGSGFVGQRLVELLVERGAARVVSFDVADKPKDAINDDRIVYVKGDITDYNQVLAALDGADCVWHIAALVGPFHDRSKYIAVNYHGSINVLKACRKHGIKKLVMSGSPSTRFDGNDIDGLTEAQLKYPKKYLQLYAETKALAEQEILAACCDELQTISIAPHQVYGPRDSLFLVNLLTVAGQGRLRIFGKGDNKCSFTYVDNYCHGLILGYDALRPGSPALGKFYIVTDGGYQIFWKVLDHAVVAMGFTSIWTKTKLPYLLLMVLAYICNVIGFLLRTKMRLNPFNV 299
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A061R3Y9_9CHLO (Nad-dependent steroid dehydrogenase-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R3Y9_9CHLO)

HSP 1 Score: 379 bits (973), Expect = 1.800e-128
Identity = 179/300 (59.67%), Postives = 232/300 (77.33%), Query Frame = 1 
Query:    1 MGVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEV--PEKFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            MGVEG  CVVTGGSGF G RLVEMLVERGA  V SFDI+  P        +++++G+LT  + V + C GADCVWH+AALVGP+H +E Y+ VNY G+LNV+NAC++  V K++MSSSPSTRFDG+ + GL ES+L++  P KFLQ YAE+KAMGE A+ EAC + L TVAIAPHQ+YGPRD+LFLP +L  A  G+LRIFG G N+V+FT++DNYCHALILG DALY GS ALG+FYI TDGG +LFW V++ A +++G+  L +K++LP  +M+   YICN IG+V GRK++++PF V
Sbjct:    1 MGVEGKTCVVTGGSGFVGSRLVEMLVERGAKSVTSFDISGPPEFFTPSDKVKHVRGNLTDPQVVEQVCTGADCVWHVAALVGPYHPQEAYVKVNYEGTLNVINACKRQKVPKIVMSSSPSTRFDGSSVRGLAESQLKIQDPGKFLQAYAETKAMGEIALREACCEELMTVAIAPHQVYGPRDSLFLPSLLHAAKTGKLRIFGKGDNKVAFTHVDNYCHALILGYDALYPGSAALGQFYIATDGGSELFWHVLDQAVVRMGYTPLRNKLKLPTGLMMVAAYICNLIGYVTGRKMKLTPFAV 300
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A7S2SV77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV77_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.410e-127
Identity = 180/300 (60.00%), Postives = 231/300 (77.00%), Query Frame = 1 
Query:   22 CVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESEL-EVPE-KFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDG-------GWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            C+VTGGSGF GQRLVEMLVERGA RV+SFDIAP P DA +   IEY+QGD++  E V K  EG DCVWH AA VGP+H +++Y+ VNY G+LNV++AC+++G  KLI SSSPSTRFDG+D+DGL E ++  +P+ K+LQ YA++KAMGE AV  ACS+ L TVAIAPHQ+YGPRDNLFLP +LE AG+G LRIFG G NR+ F+++DNYCH LILG  ALY GSPALGKFYIVTDG       G   FW  ++ A + +GFQ ++SK +LP   ++ + Y+C FIGW++G K++++PF V
Sbjct:   30 CLVTGGSGFVGQRLVEMLVERGAKRVISFDIAPPPADAWQRKEIEYVQGDISDREAVFKVVEGVDCVWHNAAAVGPYHPEDVYVKVNYEGTLNVVDACKEFGCSKLIFSSSPSTRFDGSDVDGLSEEQMPSIPQRKYLQDYAKTKAMGELAVSAACSEDLMTVAIAPHQVYGPRDNLFLPNMLEVAGQGMLRIFGGGHNRICFSHVDNYCHGLILGSTALYPGSPALGKFYIVTDGSTHPDPRGCCEFWVELDKAVVAMGFQSIWSKFKLPVWFLMPIAYLCLFIGWIIGVKIKLNPFAV 329
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A2R5G012_9STRA (3 beta-hydroxysteroid dehydrogenase type 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G012_9STRA)

HSP 1 Score: 377 bits (967), Expect = 1.730e-127
Identity = 184/306 (60.13%), Postives = 231/306 (75.49%), Query Frame = 1 
Query:    4 GVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIA-PKPFDAMEH------SAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEV--PEKFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            GVEG+ CVVTGGSGF G+RLVEMLVERGA  VVSFDI  P P   ME       + + Y+QGDLTK  DV+KACEGAD VWHIAALVGPFH  EMY+ VNY GSLNVLNAC+++G+ +L+ SSSPSTRFDG+DI  L E +L++  P  F+Q YAE+KAMGE A+ EA SD+ FTVA+APHQ+YGPRD LFLP ++     G+LRIFGNG+NRVSFT++DNYCH LI+ +D LYKGSPA GKFY+VTD  +  FW V+++A ++LG+  L++K +LP S+++ + Y    I    G   RV+PFTV
Sbjct:    9 GVEGLRCVVTGGSGFVGRRLVEMLVERGAKHVVSFDIRNPDPDPLMEFLSEEQKAKVTYIQGDLTKPADVSKACEGADAVWHIAALVGPFHKHEMYLKVNYEGSLNVLNACKEHGITRLVASSSPSTRFDGSDIYDLTEDQLKIQEPGHFMQAYAETKAMGEMAIREASSDTFFTVAVAPHQVYGPRDGLFLPNLMYACRAGKLRIFGNGQNRVSFTHVDNYCHGLIIALDKLYKGSPACGKFYVVTDDEYLKFWDVLDSASVELGYGSLWAKTKLPYSLLMFIAYFLKGITMATGHMFRVNPFTV 314
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A7S4LLS6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLS6_9EUGL)

HSP 1 Score: 367 bits (942), Expect = 1.720e-123
Identity = 174/299 (58.19%), Postives = 229/299 (76.59%), Query Frame = 1 
Query:    7 VEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKAC-EGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEVPEKFLQMYAESKAMGEKAVLEACSDS--LFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            VEG+ C VTGGSGF GQRL EML+++GA +V+SFDI+ +P  A     ++Y+QGDL   E V KA   G DCVWHIAALVGPFH KE YMAVNY G+LN++ AC+  G  +++MSSSPSTR DG  I+GL+E ++++P+KFLQ YAESKA GE A+ EAC++     TVA+APHQ+YGPRD LFLP +L  +  G+LRIFG+G+N +S  ++DNYCH LILG  ALYKGSPALGKFYIVTDGG + FW ++++A ++LG   LF+K +LP  +M+ V YICN +G++L RK +++PFTV
Sbjct:   21 VEGLTCFVTGGSGFVGQRLCEMLLDQGAKKVISFDISGEPQFARHDPRLDYVQGDLVDYEQVAKAMGPGVDCVWHIAALVGPFHPKERYMAVNYRGTLNIIKACKALGCKRIVMSSSPSTRMDGGHIEGLREDQMKIPKKFLQDYAESKAAGEVALREACNEEEDFLTVAVAPHQVYGPRDALFLPNLLSASYNGKLRIFGDGENEISVCHVDNYCHGLILGYLALYKGSPALGKFYIVTDGGKKKFWHILDDAMVQLGCTSLFTKTKLPIWLMMTVAYICNVLGFILRRKFKLTPFTV 319
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A7S0ZQA5_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZQA5_NOCSC)

HSP 1 Score: 365 bits (938), Expect = 3.580e-122
Identity = 185/300 (61.67%), Postives = 222/300 (74.00%), Query Frame = 1 
Query:   22 CVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESEL-EVPE-KFLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDG-------GWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            CVVTGGSGF GQRLVEMLVERGA RVVSFDI PKP  A ++  IEY+QGDL   +DV  A EGA CVWHI A VGPFH  ++Y  VN  G+ +VL+ACR++GV KL+MSSSPSTRFDG+D+DGL E+EL  +P+ K+LQ YA++KA GE  V  AC DSL TVA+APHQ+YGPRD LFLP +LE A  G+LRIFG G NRV FT++DNY H LI    ALYK SPAL KFYI TDG       G+ LFW  ++ A +  GF  L SK  LP  +M+ + +ICNFIGW+LG KL++SPFTV
Sbjct:   59 CVVTGGSGFVGQRLVEMLVERGAERVVSFDILPKPPTAWDNPKIEYVQGDLRNLDDVMAAVEGAACVWHIGAAVGPFHPTQLYHDVNVQGTQHVLDACRRWGVPKLVMSSSPSTRFDGSDVDGLLETELPSIPQAKYLQEYAKTKADGELLVTRACEDSLLTVAVAPHQVYGPRDTLFLPNMLETASSGKLRIFGKGLNRVCFTHVDNYAHGLISAERALYKDSPALAKFYICTDGASHTYPEGYGLFWEELDKAVVACGFPALASKFHLPLPLMMVIAHICNFIGWMLGTKLKLSPFTV 358
[Close]
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Match: A0A7S4RWC0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RWC0_9DINO)

HSP 1 Score: 362 bits (930), Expect = 4.220e-121
Identity = 177/300 (59.00%), Postives = 227/300 (75.67%), Query Frame = 1 
Query:   22 CVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSAIEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLNVLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESEL-EVPEK-FLQMYAESKAMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFGNGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDG-------GWQLFWGVINNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTV 894
            CVVTGGSGF GQRLVEMLVERGA  VVSFDI P P  A + S I+Y+QGDL   E V KA EGADCVWH+ A VGPFH +++Y  VN  G+ +V+ ACR  GV K++MSSSPSTRFDG+DI+GL E+EL  +P++ +LQ YA +KA GEK + +AC D L T+A+APHQ+YGPRD LFLP +LE A  G+LR+FGNG+NRV FT++DNYCH LILG  ALYKGSPALG+FYI TD        G+ +FW  ++ A + +GFQ LFSK  LP  +M+ + + CN +G+++G+KL+++PFTV
Sbjct:   48 CVVTGGSGFVGQRLVEMLVERGAESVVSFDILPAPPAAWQDSRIKYVQGDLRSLESVAKAVEGADCVWHLGAAVGPFHPRQLYEDVNVGGTRHVVKACRDAGVPKIVMSSSPSTRFDGSDIEGLIETELPSLPQRRYLQEYAATKAAGEKFLTDACCDELLTIAVAPHQVYGPRDTLFLPNMLETAATGKLRVFGNGRNRVCFTHVDNYCHGLILGERALYKGSPALGQFYICTDAATHAHPEGYCVFWKELDRAVVGMGFQSLFSKFHLPLVLMVCLAWACNVVGFIMGKKLKLNPFTV 347
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig947.17218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR6_ECTSI1.150e-17579.19Sterol-4-alpha-carboxylate 3-dehydrogenase, decarb... [more]
A0A7S3Y444_HETAK1.830e-14967.68Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2UZ88_9STRA4.950e-14263.58Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z5A6_9STRA4.700e-13962.96Sterol-4-alpha-carboxylate 3-dehydrogenase, decarb... [more]
A0A061R3Y9_9CHLO1.800e-12859.67Nad-dependent steroid dehydrogenase-like protein n... [more]
A0A7S2SV77_9STRA1.410e-12760.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5G012_9STRA1.730e-12760.133 beta-hydroxysteroid dehydrogenase type 4 n=1 Tax... [more]
A0A7S4LLS6_9EUGL1.720e-12358.19Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0ZQA5_NOCSC3.580e-12261.67Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7S4RWC0_9DINO4.220e-12159.00Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig947contigH-paniculata_contig947:19619..30204 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score504.6
Seed ortholog evalue3.2e-140
Seed eggNOG ortholog2880.D7FKR6
KEGG rclassRC01163
KEGG koko:K07748
KEGG ReactionR07494
KEGG Pathwayko00100,ko01100,ko01130,map00100,map01100,map01130
KEGG ModuleM00101
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3-beta-hydroxy-delta5-steroid dehydrogenase activity
EggNOG OGsCOG0451@1,KOG1430@2759
Ec32 ortholog descriptionSterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating
Ec32 orthologEc-21_001850.1
EC1.1.1.170
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons7
Model size912
Cds size912
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931178.2800503-CDS-H-paniculata_contig947:19618..197831622931178.2800503-CDS-H-paniculata_contig947:19618..19783Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 19619..19783 +
1691481625.7155547-CDS-H-paniculata_contig947:19618..197831691481625.7155547-CDS-H-paniculata_contig947:19618..19783Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 19619..19783 +
1622931178.2944608-CDS-H-paniculata_contig947:23228..233801622931178.2944608-CDS-H-paniculata_contig947:23228..23380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 23229..23380 +
1691481625.7337735-CDS-H-paniculata_contig947:23228..233801691481625.7337735-CDS-H-paniculata_contig947:23228..23380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 23229..23380 +
1622931178.3101225-CDS-H-paniculata_contig947:25031..251461622931178.3101225-CDS-H-paniculata_contig947:25031..25146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 25032..25146 +
1691481625.746132-CDS-H-paniculata_contig947:25031..251461691481625.746132-CDS-H-paniculata_contig947:25031..25146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 25032..25146 +
1622931178.3254514-CDS-H-paniculata_contig947:26829..269331622931178.3254514-CDS-H-paniculata_contig947:26829..26933Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 26830..26933 +
1691481625.7553668-CDS-H-paniculata_contig947:26829..269331691481625.7553668-CDS-H-paniculata_contig947:26829..26933Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 26830..26933 +
1622931178.3410192-CDS-H-paniculata_contig947:27127..272721622931178.3410192-CDS-H-paniculata_contig947:27127..27272Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 27128..27272 +
1691481625.7641666-CDS-H-paniculata_contig947:27127..272721691481625.7641666-CDS-H-paniculata_contig947:27127..27272Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 27128..27272 +
1622931178.3656814-CDS-H-paniculata_contig947:29442..294931622931178.3656814-CDS-H-paniculata_contig947:29442..29493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 29443..29493 +
1691481625.772734-CDS-H-paniculata_contig947:29442..294931691481625.772734-CDS-H-paniculata_contig947:29442..29493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 29443..29493 +
1622931178.385258-CDS-H-paniculata_contig947:30024..302041622931178.385258-CDS-H-paniculata_contig947:30024..30204Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 30025..30204 +
1691481625.7812011-CDS-H-paniculata_contig947:30024..302041691481625.7812011-CDS-H-paniculata_contig947:30024..30204Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig947 30025..30204 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig947.17218.1prot_H-paniculata_contig947.17218.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig947 19619..30204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig947.17218.1

>prot_H-paniculata_contig947.17218.1 ID=prot_H-paniculata_contig947.17218.1|Name=mRNA_H-paniculata_contig947.17218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=304bp
MGVEGVNCVVTGGSGFCGQRLVEMLVERGASRVVSFDIAPKPFDAMEHSA
IEYMQGDLTKEEDVNKACEGADCVWHIAALVGPFHDKEMYMAVNYHGSLN
VLNACRKYGVGKLIMSSSPSTRFDGNDIDGLKESELEVPEKFLQMYAESK
AMGEKAVLEACSDSLFTVAIAPHQIYGPRDNLFLPGILEPAGKGQLRIFG
NGKNRVSFTYIDNYCHALILGIDALYKGSPALGKFYIVTDGGWQLFWGVI
NNAGMKLGFQDLFSKVRLPASMMLGVGYICNFIGWVLGRKLRVSPFTVSS
SQA*
back to top

mRNA from alignment at H-paniculata_contig947:19619..30204+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig947.17218.1 ID=mRNA_H-paniculata_contig947.17218.1|Name=mRNA_H-paniculata_contig947.17218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10586bp|location=Sequence derived from alignment at H-paniculata_contig947:19619..30204+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGTCGAAGGTGTAAACTGCGTGGTGACCGGTGGCTCAGGGTTCTG
TGGTCAACGCCTGGTAGAGATGCTTGTGGAGCGAGGCGCATCGAGGGTGG
TGTCCTTCGACATCGCTCCAAAGCCTTTTGACGCAATGGAGCATTCGGCC
ATAGAGTATATGCAGGTGATGGTGTGATGATTTATCCCACCCGCCTTGGC
ATGGCGGCTGGTGCAATGGTAATGAAAGCGTGCAACGTTCCTGAACCAGT
AGCCCAGCTGTGGTGTGTGCGAGGTTTCAGGTATAACCCCGGTCCATTCG
TTGTTGAGGATGAAGATGTGTTGGATTGGTTCGACGATGAGGATGAGATG
CTGCTTCCTGTATGTCAAGCAACCAACCATCTTGAGATATTGACATCGTT
CCTAACGCTGACCTCTATCTCGTTTGCTAACTGCAGCCGGTGTTTTCCCT
CCGCTTTTCAAAACTGAAGATATGACTTTACTCTGTTACTCACTGCAGCT
ACAGCCTGTCCAAGTTTGGAACACCTTCAAAAGTCATAGTTTCCCATAAG
AAGTGGTTCTTCGATTTTTCACTTGGATAATTGAAAAAATCATTTTTTTT
TGCAATTACCCAAGTCCCATAAGAAATCGGACTCAAATTTACCGTTCGAA
AATTTAGCCGCACGAATCGCGCTGCCACGCTCGACTGTTTCTCAGACCCG
TCGACTATCCTCGCAATTCTATCCTTTATAGGTGTTCGCAGTCTGTTCGG
TCTTGCTCAAGTAGATTTCGATATAACTGGATAACCCTCTGATATCGAAT
TGGAGGCGAAGCGAAATTAAACTCATCCCGGATGGATCGCACGGTGCGGG
AGTGTGACAGTGAAGAAACACATTCGTGCGATGGCGCACCGGGTGCGAAA
AGCGAAGAAGAACTGCTCGTCGATCATTTGCGCATTTCCTGCAGGCAACA
AAGGGCACATCATAAACGACACGATGGAGAAATATGTATACTTCGTTTAT
TGTTGCTGTTTCGTGCCGATACATCCAGAAGCCATCCTCATCAAATCAGA
AACCACCCCCAAATGATTATCCATCTAGAGCCCTACCCCTTTTCTCGCTC
CCACCATCCTTCGTTCATCGCAAGGGGCACGTTATCTAGAGGGTTGGTGT
GCAACGCGAAGAACTCGTTCGTGTCAGACTGCTCTGCACGATATCAAAGG
GTTGTACGTAATCGGATACTTGGGAGTATCAAAGCAACTTGATTTTAACT
GGTGACCCTCCTCCTAGCGTGAATCCCCCTCCCCCCTGCGAACCTCTTGT
TCCCTTTTTCCTCCCTCTTGTTTCATGTATCTTTTACATTATAGCACAGA
ATTGATGAACGTTCATGTTGACACATTCAGCCTCTCATTCATTCGACCTG
TGAAAAAACTTTGATGACCGTACGAAAAAAAGCAGGCTACATGTGCCTAC
TCCCCGAGAACTATAGTTTTCACAGTTGATAACCTAAAATATTTTCTCGG
CATTGATTTTGAGGTGTAGGTGAACGCTTCAAAACTTTTATGACGTTAGG
CATACCCGAACCGGCACAAATATTGACCTACCACTACTGTCTCGTGGTAC
TGTAGTATATGGAGCAGGTAGAATGGATCACTCAGAGTCAATCCCAATGT
CGCCCAAAAAGCAAAACAGGCAGACAAGACTATCACTAAATCCTGAAGGC
TGGCTGGTGGTTGAACCTGGCCGCAGCTTTCGTGCTACTTCTGCCTCGTA
CTGGTTTTCGCGCACGCAATACACCCAACCGAGACTATAGACGGACAGTA
CGTGCAGGCAGTAGATGCCATGGATTACACCCGGTTCCAGCCAACCCCAC
AGTAAGAGCCCCAAGACCATCATCATAGTCCCAAGGCCTTCTGATGGCTG
CGTATATAGTCAAGACAACAGTCGTACGTGACGCGAACAGTCAGCGTATT
GCAAGCAATCAGTATTGTCATCAGGGAATCCCACAATCATGGTAGTGTTC
CACAAGCCACGCCCCTGTGCACTCTCCTAGTAAAAAACATGGAACATGGG
AAGGGAAACAAACGGCATGGGGAAACATGGTTGTTCTTTGTTCTTCGCTA
TTTTTCGGCGAGCAAAAAAAGGGAAAGTCGTCCATGGAACAAATGAAGAA
GAAAAACTCAAGGGGAAAAACACAAACGCTGTAACGTTTAGAACAGCCCT
AATGTGCCACTCGTCGATTCACTCGCTGAGCCGTGCGTTGGAAAGCCCTA
ATTCCGCTGCACAATTGTCTGGCAAAGGTTTTATTATTTTTTCGTCAGTT
GTGGGAGATCGTCTCGGCTCTTGTGGTTTCCTGCCCTACGCTCTGCGCCT
GACTGTAGTTGGGGCCAAAACTCGAAACAGTTTGCTAAACAATTCCTCGG
TATTTGCTGTATCCTCTAGCTGAGTAAACGCCCATGATTCATGGGTACTC
CACAAAACAAGCTTCACTCCGTTGCAATTACTCGTTTTTCACAACCAATT
CTAAACCGGATGTCAAACAGTTAGCTAGATGCAAGTAAATGCGAGCACTA
ATGCGCACACAGGTATATATATATATATAGTAAAACGTACAAAACGTAGT
AAATGTTAATGTCTGGCTCGCGCAGCGTTTGCAAGCCAAGCCAATTTCGC
AGTGTTGCTTTCAACCAAATTTTCAATCTTCGGTACTTCGCGCGCGTTTT
ACCTGTTGTGTTGTAGGGCGTAAACTCGTACCTCCTCCGTTCAGTAAGTA
AAGGGATTTAGGTTTGACGTGCTGTACATCCAGCATTATGACGATTCACT
GGGAGCTCGTGGTATCGATTCGACTCAATTCTACCAAGAAAATTAATTTC
ACAGATTGCGGGACAAAAGCTGAAACAAAATCACCCATATTTTTTTGAGG
CGCAACACAAGCACACAACACCACGATGGAGCCTGCCCTGGCGGCCCAAC
CACGCCGCAGAGACAAGTGGTTGCCTCTCGGCAGGAGGTATGTGCTTGCA
ATTGACATCACGACATCACTTAAGCTGGGTATCTCGAAATTACCCGATGG
CGAGCTGGCACGACTCAAGCATGGCTGCGGCCGAACGTACCAGTCTTTTT
TTTTTGCCTGAAACTGCACCTTTTGGGGTGATTTTTGGGCCATTTGCTCT
TTTTTTAGACGCTTGCACACGCCGTGAGCTTTATAGATTGCCGTGAAAAT
TTGGATTCAAACGCAAAAAAGATGAAGGATTCCAAATGTTGAAAAAAACA
AAAAAAACGGACGTCATCAATGTCACACACAAATCTAAGTTCCTTTACTT
CCTTAGCGGGGGGAGCTCATTTGTTATGGATACATGAGGTGCTCACAAAA
TTGAGTTTCGCATCGGAATCTGATCTTCGAAACAATTATACGGGTCAAAT
GGTCCGCTTTTTGAGAGAGAGATATTTTTTTCGTCCAAGCGATATATACG
CTCGTAAAAGGATAATTTCAGCGAGATCTTTGGCGAGGGGGTCGTGCGAT
TTTTTTGCGCACGCCGTGGACCAAAACCGTCGCTCTTCCTTTGCCCATAT
TGGTGGCACGCTCTCGATTTGATCAAGTCTCATGCTCCTATTTTTTGGTC
TCTATCATAGGGAGATCTGACAAAGGAAGAAGATGTCAACAAGGCCTGCG
AAGGGGCGGACTGCGTTTGGCACATTGCGGCTCTGGTAGGACCGTTTCAT
GATAAAGAAATGTACATGGCTGTCAATTACCATGGATCATTGAATGTACT
CAACGCCTGCAGGTGCGTAGAATCTCTCGCGTATTTTTCTCTTGTTCGTT
TTTATATCTCGAATGCCAGCATCGTATCCATCCACACCCCTCTGTTTGGT
GCTAATGGTGGAAATCGTAGGGACCTTCGTATTGTGGACGTTTCTAATCC
TCCACCAGTGGTGGTTTGTCTCGCGTTGTCAAAAAGATAACCCGGAAAGT
GTGCACAATCCACGCGATAACTCCGAACGCAACGGACCGTAGAATGCTAG
TATGACGCCGCTGCAGCAACCAGCATGTATAACTATAAGGGCGATAAATA
GCAAGACGAGAAGATAACACGCAAGCACCTCGGGACAGTGCACCGTGTGT
AGGCACGGTGCAGGCGCAATGTGGTGACAAGAGCGAAATACCCAATGTTC
GGTCTCTACATTTCCTCTGATACGCTTCATATCGCTTGCTGGGTTGTTGA
TATTGCCACGGCAAATATGCTCTATGGTTCGATGTCTGCTCTTCATTTTC
TCCGCTTCCCTCTTTACTCTCCTGGTGTGTTGTGAGTTTGCCTGCGATAC
CCTTGTTCGGATGTGCAAATCTGACTGTAGTACTGCCATTATTCTCAATA
TCCTTTCTTGACTTGTTCGATGAAGACACGATCACCGCTATTCAAATATG
CCAATCTCTCTCATTGAACAACTTGCTGACCAGCGTGTACGAAAGTAGAT
ATTCAAATACATTTCTCTAATGCCTTCATACAAATAAGAGTAAGTTTTAT
TATCTTGAAGGCAGTAAGTTTATCGTCTTTAAGGCTGTGGGAAATGGCCG
TTCGTCGTTTTTCGGATTTTCCTCTTGAATACGGTGTAATGGAGAGATGC
TCTGATACCGCTGCGTTTCACCCGGGACGCTTTGCATGGATCTTCCGGGG
ACGTGGTCGACCTCGAATCCACCATATCTCGTGTGTACTCTTGGCCCATG
TAAATGTCTCGAGAAGATAAAACGATATTGAAGAGAAATAGAGCAGAGGA
AGATGAATCTACAAAAGATGCTGGCTAACTGTTGAAACCGTCACTGTATT
TGTTGGGTGTCCTGGACCCTGCAGGGCGATGAACGAGAGCCTGTGCCGGG
TAACGTTAAAAAAGCTGACATGATAGGCTTCTCGAATCTGCCCTTTCGTC
TTCTATTTTGTGCAATTGCAATCGTCGTCGTTGACAAACAAAGGGACGAT
AAAATCGTTTTTTTGGTCCTCCCCAGTTTGTAAAGTGGCATTTTGAACGC
TTCTAAGTCAGACTGTAAAAAAAAATGATGACGCGACGCAGTACAGAGCT
GGTAACGAGGGTTTTGATTCAATATAGACTTTGATCCCCCCGAAAAACTT
GGAATGTCCTGCAATTTCGTCACTTTGCCTCAGGGCAGTCCTTAATTTTA
GTCATACTCCCACAGTAGTTGGCCTTGGCCACGTCCCTCGTTCTATGCAG
TCGGATTATCCATTAAGGTATCTTCAGTCGACAAAACTAATTGAAAATGT
TTGAAATTCTCGCCAACTGTTCCAAGTTGATCCACATAAGCAATGCCACG
AATATCTTTTCCATCAAGCTTTACGTGCATCTTCGGCGTGCGAAGTTTTG
GACTACAATCTTTGCAACAGTGACCGCTGACCATGTTTTTTGCTACTGCT
TTACTGCTGGCAGAAAATATGGCGTGGGGAAGCTGATCATGTCCAGCAGT
CCGAGCACTCGATTCGACGGGAATGACATCGATGGCCTCAAGGAGAGCGA
GCTGGAAGTACCAGAAAAATTCTTACAGGTAAAGTATCTTATTAATGGAA
CACGATGTGGCACTCGTCACCCTGCAATATATGTACGTATTAACACAAGC
TAGGCCAGCCAAAAAACTAGTCTGATGCTTTTGAGGCCATGCCCCCATCA
ATTTAACAAATTTTGAGGTGAAATTTCGACGTCGTGTTCTCCGCTAACTT
GCCTGCACATTCAGAGGCGTTCACTTTTTTTTTTTTTTTGCTTTTCTTAT
CTAGAGTTTTGGCCTATGCGAAGACTCGAGATAATGCAGAGCGGCCGTAA
TTGCCTTGAAAAAAAAAATGTGCACTTTACTCGATAATGTTTTCACCTGC
GTTCCGAATATGGAGTTGAATTTTAGGTCAAAATTCGCAAAACTGAGCGG
GGCATCGCAGATTGTTGTGGGACCCCTGTGGGACATACCGACTGGGCGTA
AGTTTTTGCTGTCCTTCCCCCACAAGGAAGCGGGCTACCGCAGTACAAGT
ATGTGCAGACGAGTGACTGGAGATGTAAGATGTACAGCATGGCACCTACC
AAATGACAAATAAGATCAGATCTCCAGTGCCACGACTACTTGTTGACCGT
CTGAAACGAACCACCACTCTACTCGTACGCCGTACTCATCCTTTGACATA
ATATCGAACATCACACCCGGTAGTGCCTGCCTATGCATTTTTATCCACTA
TCCGTCCCTCCCTATCGATGGTGCTCACGATACGAGTCGTGCGACTACTG
GTACGGGTTCTGAATCTCCAAGTACGCACGGCAGTAGTCTCGCGTGCGGC
GTGCGAAGCGGCGCACCCGCTGAACTGTCAGGATATTTTCCGTGCACATC
GAGGCGATCATGTTCCGGTGCAAGTGCTTCGGCACCTCGTCGTTGAGCTC
GTGCCAAAACTTCCGCTTGCACATGCCCCAGGAGTACTCGATTCCCACCC
CCGCCACCTCCGGGTGGAACTTCGACGATAGCAGCAGGATGTGCCCACAA
CTATTTGGTTGCCTCTATCTCCTCCTGGGTGTCGAAAAGCTTCGATTGCT
TCACCTGTGTCGTCTTTTTTGTACTACGCGTGTAGTTCAATTTCAACCTC
CATTTCCCCCTCTGCCAATCGAAGTAGACCCTCGGGGCAAAGGTCTTCTA
CCAACGCATGGTACCATGCGAGCTTGGAGCCATGTCGCAGCTTGTGCCTT
GTGTAAGCCCCCAACGGCTGCAGTGCTCCAACTCAAAATTTGAAAATGTC
TTATGCCGCCGCAAACATTGGCAAACTGATGGTTCTAGCTGCCAATTTAA
TGTAAACACGAACCTATACATTCATGGATGGTCTAAAGACAGTACAATTT
TGTTTGTAAATGCCTGCCAATATGACATTGCCACCTGGCCTGCTCATAGA
CGATGATTTGACGATTACAGCAGTACGCTCGGGGTGCCGTCCCCACATGA
TTTACGGATCTAGCCGGGCCTTCCGGTAACCGACACTCGAACCCATTTTC
GGGGTAAGTGTTGGGCAAAGGTTTCCTCCCCTCCTTTCAAGGAAAAACAA
AAACAAACTGTAGTCAGAATGTTACGACCGATTGAAACTAAATGGGTTTC
TTGGCTGGCCAAGCTTGTATGCACCTTGATGTTTTCCTGCGTTAGCTTTG
GAACGGATGATATATCACCGCTTGACGAGATATGTTCCCCCCACGTTGTT
TCATTTTCCAGATGTATGCAGAAAGCAAGGCTATGGGTGAGAAGGCTGTC
CTGGAGGCGTGCTCAGACAGTCTATTCACTGTGGCAATCGCGCCGCACCA
GATATACGGCCCTAGGTACGAGGAAGTTGGAAGATCCCGGATGCCCATGC
ATCATACACCCTTGTGAAGGCTCTTCGGCCGCCCGCTGTTTCCCGAGAAT
AAACGTTTTGCGGTCTTGAGGTGAAATGGTTGTTGTGTGGTACTTGTGCT
CGGACCATTACGGCAGTAGGCGATCCACGTTTGCCCCAAATATCAAACCC
TAACCCCAGGGACAATCTTTTTCTGCCGGGTATCCTGGAGCCAGCGGGGA
AGGGACAACTGAGAATCTTCGGCAACGGCAAGAACAGGGTGTCCTTCACC
TACATCGACAACTACTGTCATGCATTGATTTTGGGAATCGACGCCTTGTA
CAAGGTGCGATTCATTTACCCCACGTGTACATGTCGCATGCTTCTTCTTG
TGTTGATTACTACAGAGTGGTTTGCGGAAGCTGCCAGATAAGCCGTTATT
TTGGATTTTCTCACGCCCCTTCTTCTTTAGTGAGGACCTAAAATGTAACC
TGCGTGTTTCTTGCTTAAGTCTCGAGGTCGCCAGGGTCCGGTGCAACTTT
TTTTGTTCTCATTGGTTTCATGTGGTTCCAAACCGACTATCCACGGACCC
CATAAAACGGGTAAAATAAATACACTGGGCACTAACAAGTAGGTTAAATT
TCGGGTCCTAAATCCAAAAAACGGCATGAAAAAATCAACAAATTTTCGCT
TGACCTGAGGAAATTGATAAGGGTTCGATATACTTACTTTTGTGTGACTT
AAGAAAGCGGTAAGAATGGGGTCTATTTCGGATTTGCAACACCATCTTTC
GACATTTTCGCCAAAACTTGATACACGTGTTTTTTGCTTAATTGCCAAGC
TTGTTAGGGTTTGATCGGTTCGAATTTCGCTCTTATTCACCGGTTTGTAA
AATGTTCCACACATGCAACACAACGGTTCGTAGTCCATCCGGTGCGCATC
ATTGGACGGACCATTCCGAGTGATGGGTACATGTTTATTCATTGCTAACG
CGTACGCTATGCATTATCAGCACATATTCTGTCTTAACTGACCCGTACAC
GCCCTATCATGCGTTCATTTTTCTTCCGTGAGTGTGGGAAGGACCAGAGC
CATACGCCATCACGTTCTTGATACGTGGAAAAAGCCTGGGCCCGTAGCCG
GTATTGTCCTGTGTATGTGGGAAGAGCCGGAGCCGTACGACCAGCATTTC
CGTTTCGGAGTGAAAATTGAAACCGACACATGACAAACGTCGAGAACATG
AATTCCCTGTTCGCGCTGCATGTACTGGGCTGACTCTCTGAATGGCGGTA
GCTCCCTATCCCCGCAATCATGCCAAACATGTTGATCTGACTCTTTGAAG
TGGGAATCAGGTGGACACAGGTGAGGGTCAAACAAGCCTAGTGTTCTCCA
TATCTACGTGGTGTATAGAGTAGTAGTTACTGTACCGTGTATCCATGATG
CTCACGTGATGTAAATAGTATCCATACATGTTTGTGAGCCACGGACCTAC
GCCCGAACGGGTAGGGTAGCTCTTGAACTGAGCATGACTGGAAGTCTAGT
CAGAGGTATTTTAGTGGTTGCAACCCCACACACACTGCCTACTTGGTCCG
GCCGAACCGGGGTGGCGCCTATCCCGCAGAGGAATAAATAACTCTGTTCT
GTTGAAGGAAATGTAGAAATACTTTATTAAAATACTTGGGTATGGAAGCA
TCGGATAAAGGTTTTGCCTTAGCTTTCCGGGGGTTAAAAAAGCACAAAAA
AACATGTTTGTGAGAACGAAATTGTTTGTAAACCCATACGATCTGTACAT
GTTTAGCCACGAGTGATGCGTACGCTATCCATCATCAGCATATATTGTAT
CTGAAATGGTCAATACACGCCCTGCGATACGAATATATATATATTTGTCT
ACGGATGATACATAGCCCACGCATTATCAGTATCTCATTATCTGCCACCG
ATGTGTAGGGTATGGAGTGTACGGTTCACGAGCCATCGGATATCTGGAAT
GTTCGTGTTGCTGTCCGCAGTGTGCCGCCGCCTTATGGGTTGGTGACCAT
AGCCTGAATAGTTTATGCCCCTGGTGGAAAAGACATGCGGCGCATTTACG
AAATATGGCATTACTAAGATGTACGTATCCTTTCTCGGAGATTGTGCCTC
AGTATCTTTTGTACACTTGCAGGCCTCGCGTTCACAAGCTCAGTCTTATA
ACCTCAGTCTTATACTAGCCTACGAAGTCGTGGCAGCGCACATTGGGCCA
TGTCTTGTGTTCTTCTGCTTGCCAAGACTAGCTGTAACTTCTTTTAAGTG
ACCTGGTGCATACCACGTCGAGAAAGCTCTTACAGACACATTTTAGGGGT
TCCTGAAACAGCTTGTGAAACAAAACATTGGGCTGTGCTGGATGTTTGGT
TAAATGCCGTTGTGCTGTGTGTACACGAAGTCGTCACTCTGCCCATCCAT
AGAGAGGCATTTATTTTTCGTTCTTAGCCAATCTCACTGGTCATGATATG
ATGCCGCGATGTCGTGATGTGCAGGGTTCGCCGGCGTTAGGGAAGTTCTA
CATTGTAACGGATGGCGGGTGGCAGGTGAGCTCGCCTCTTGTCTGTACGT
TTGTTCGCGTGCGCTTGTTATTCTTGCTGGTCGCACATGGGCAACTACCT
GCATGCCGTTTAGTCCTTGGGTTTATATATTTACACATAACCTCGTGAAG
CCACGTAATTAAACAAAACCTTACAGATACTGTAGTTCTCGGCTGTAATT
CAGCCAGCCATATAGGACCTAAGTGTTGTTGAAGTTCTATGTTGCAACTC
GTACCCACACGCGCTGAGCGCTTTTGTTTCCAGTACGGCGCCCCTTGCAT
TAAAACCTGAGCGCTGACCTTGCTTCTGTCTGACTGATTGGGTATTAGGT
TGATTTGCCAGCACATTCATCGATATATTGAGCATCTCCGCTTACGAACG
AAATACACACCGCTTGTGCTGAGCTACACTGCCGATCGAAAACGGTACAA
CCCTAGACTGTAACATGTACATGGATGAAATACATGACATCCTCATGACT
CGCCCCTTTGCAACGTTTTGCAACGTTTTGTTTTGCCAATCGATGGCGAT
GGTAAGCTCTTCTGGGGAGTGATCAACAACGCGGGCATGAAATTGGGATT
CCAGGACCTGTTTTCTAAGGTTCGCTTGCCTGCGTCGATGATGCTTGGAG
TGGGCTACATTTGCAACTTCATCGGTTGGGTCCTAGGCCGAAAACTGCGG
GTCAGCCCGTTCACGGTGAGCTCGTCCCAGGCTTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig947:19619..30204+

>mRNA_H-paniculata_contig947.17218.1 ID=mRNA_H-paniculata_contig947.17218.1|Name=mRNA_H-paniculata_contig947.17218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1824bp|location=Sequence derived from alignment at H-paniculata_contig947:19619..30204+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGTCGAAGGTGTAAACTGCGTGGTGACCGGTGGCTCAGGGTTCTG
TGGTCAACGCCTGGTAGAGATGCTTGTGGAGCGAGGCGCATCGAGGGTGG
TGTCCTTCGACATCGCTCCAAAGCCTTTTGACGCAATGGAGCATTCGGCC
ATAGAGTATATGCAGATGGGTGTCGAAGGTGTAAACTGCGTGGTGACCGG
TGGCTCAGGGTTCTGTGGTCAACGCCTGGTAGAGATGCTTGTGGAGCGAG
GCGCATCGAGGGTGGTGTCCTTCGACATCGCTCCAAAGCCTTTTGACGCA
ATGGAGCATTCGGCCATAGAGTATATGCAGGGAGATCTGACAAAGGAAGA
AGATGTCAACAAGGCCTGCGAAGGGGCGGACTGCGTTTGGCACATTGCGG
CTCTGGTAGGACCGTTTCATGATAAAGAAATGTACATGGCTGTCAATTAC
CATGGATCATTGAATGTACTCAACGCCTGCAGGGAGATCTGACAAAGGAA
GAAGATGTCAACAAGGCCTGCGAAGGGGCGGACTGCGTTTGGCACATTGC
GGCTCTGGTAGGACCGTTTCATGATAAAGAAATGTACATGGCTGTCAATT
ACCATGGATCATTGAATGTACTCAACGCCTGCAGAAAATATGGCGTGGGG
AAGCTGATCATGTCCAGCAGTCCGAGCACTCGATTCGACGGGAATGACAT
CGATGGCCTCAAGGAGAGCGAGCTGGAAGTACCAGAAAAATTCTTACAGA
AAATATGGCGTGGGGAAGCTGATCATGTCCAGCAGTCCGAGCACTCGATT
CGACGGGAATGACATCGATGGCCTCAAGGAGAGCGAGCTGGAAGTACCAG
AAAAATTCTTACAGATGTATGCAGAAAGCAAGGCTATGGGTGAGAAGGCT
GTCCTGGAGGCGTGCTCAGACAGTCTATTCACTGTGGCAATCGCGCCGCA
CCAGATATACGGCCCTAGATGTATGCAGAAAGCAAGGCTATGGGTGAGAA
GGCTGTCCTGGAGGCGTGCTCAGACAGTCTATTCACTGTGGCAATCGCGC
CGCACCAGATATACGGCCCTAGGGACAATCTTTTTCTGCCGGGTATCCTG
GAGCCAGCGGGGAAGGGACAACTGAGAATCTTCGGCAACGGCAAGAACAG
GGTGTCCTTCACCTACATCGACAACTACTGTCATGCATTGATTTTGGGAA
TCGACGCCTTGTACAAGGGACAATCTTTTTCTGCCGGGTATCCTGGAGCC
AGCGGGGAAGGGACAACTGAGAATCTTCGGCAACGGCAAGAACAGGGTGT
CCTTCACCTACATCGACAACTACTGTCATGCATTGATTTTGGGAATCGAC
GCCTTGTACAAGGGTTCGCCGGCGTTAGGGAAGTTCTACATTGTAACGGA
TGGCGGGTGGCAGGGTTCGCCGGCGTTAGGGAAGTTCTACATTGTAACGG
ATGGCGGGTGGCAGCTCTTCTGGGGAGTGATCAACAACGCGGGCATGAAA
TTGGGATTCCAGGACCTGTTTTCTAAGGTTCGCTTGCCTGCGTCGATGAT
GCTTGGAGTGGGCTACATTTGCAACTTCATCGGTTGGGTCCTAGGCCGAA
AACTGCGGGTCAGCCCGTTCACGGTGAGCTCGTCCCAGGCTTAGCTCTTC
TGGGGAGTGATCAACAACGCGGGCATGAAATTGGGATTCCAGGACCTGTT
TTCTAAGGTTCGCTTGCCTGCGTCGATGATGCTTGGAGTGGGCTACATTT
GCAACTTCATCGGTTGGGTCCTAGGCCGAAAACTGCGGGTCAGCCCGTTC
ACGGTGAGCTCGTCCCAGGCTTAG
back to top