mRNA_H-paniculata_contig946.17207.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig946.17207.1
Unique NamemRNA_H-paniculata_contig946.17207.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: D7FMZ8_ECTSI (Phosphomevalonate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMZ8_ECTSI)

HSP 1 Score: 705 bits (1820), Expect = 2.410e-246
Identity = 386/604 (63.91%), Postives = 444/604 (73.51%), Query Frame = 1
Query:  187 INDKSDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDA------ALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSWE 1980
            +N  + E C TVSAPGKVLVAGGYLVLDRPN+GVVLAATARF+TSVKWT+E+   P A    E       LR+KVESPQFR ++WY+C+ YEDGRLP LL+S DQ SN+FVER LTYVLGYLL+A   G  K  +    + + +  AG+    LAIKLRADNDFYSQTSQL  RGLP T+ ALATLPPFLECP+++DGAVVVAKTGMGSSAAL+SSLVGALLSFFG AR PC   + D       A     G+D     VNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTH YTRFSPSE+AD LSAGD ++A             +G    SA PTP++R + CV+A+GGWDAER QLRLP CFRLLMGDVCGGSSTPSMV+KVQAWRA PSTA  AKE+WS LGSTN+ IA  LN++   +       TGG S FEA  K LSALP  KWAE +     L   S+++L+ L+ AFAKAR+LLR+MGE AGVPIEPPVQTKLV+AT  LPGVLCAGVPGAGGVDAVFAI VHP++E GVR+LWASWR G          D + +GE   G  VCPLLL+ASE GLEGG + +R L WE
Sbjct:    1 MNGSTGEECTTVSAPGKVLVAGGYLVLDRPNIGVVLAATARFFTSVKWTEEKTPAPVAAP--EKGLQQSLLRIKVESPQFRSVHWYECVMYEDGRLPVLLASSDQTSNVFVERALTYVLGYLLQAKGVGGGKSND----VKDTVRSAGDKGHALAIKLRADNDFYSQTSQLRARGLPSTSGALATLPPFLECPVSEDGAVVVAKTGMGSSAALVSSLVGALLSFFGAARLPCFDGTPDEEPTGAPACGSPSGTDAAVLGVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHTYTRFSPSELADALSAGDAASA-------------DGSSGFSASPTPIERTTACVQARGGWDAERSQLRLPPCFRLLMGDVCGGSSTPSMVRKVQAWRAHPSTADQAKELWSTLGSTNTVIAKTLNALAAMAAVVPGGSTGGQS-FEADAKVLSALPPSKWAE-LAGSGTLGADSLQELLHLRTAFAKARQLLREMGEDAGVPIEPPVQTKLVNATSTLPGVLCAGVPGAGGVDAVFAIVVHPDAEDGVRDLWASWRVGA---------DTESEGE---GATVCPLLLTASEGGLEGGIVSSRTLGWE 571          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A835YYC0_9STRA (Phosphomevalonate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC0_9STRA)

HSP 1 Score: 409 bits (1051), Expect = 5.000e-131
Identity = 269/598 (44.98%), Postives = 340/598 (56.86%), Query Frame = 1
Query:  220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSS--DAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSWE*VGTIQSHL 2007
            VSAPGKVL+ GGYLVL++PN G+VL  TARF+T+  W   +   P    ++++ +  Q L + V+SPQFR  Y+Y C F   G LP L     Q SN++VE TL YV+ +L               A+ M    L+G    VL IKL ADNDFYSQT+QL  RGLP TAEALA+LP FL CP   DG + V+KTGMGSSAA+I+SLVGALL  F     P   + +  DA+ NV EG           + + HNLAQACH  AQGK+GSGFDV+AAVYGTH+YTRFSP+ +AD LSA               DG     D          R+   V A   WD +R  + LP  F LLMGDV GGSSTPSMVK V  WRA  ST   + ++W  L   N++I  LL  ++   L      +    S  A  +HLS LPS +          +   +   L +L+ AF + R LLR+MG+ AGVPIEPP QT L +AT ALPGVLC+GVPGAGGVDA++AI VHP + S V++LWASW+     +      DA R         VCPLLL A+ + L  G +  + L      TI  H+
Sbjct:   16 VSAPGKVLLTGGYLVLEQPNSGIVLGTTARFHTTTCW---ERYAPLCLLLQQTSSHTQNLAITVDSPQFRQQYYYTCSFPPAGVLPVLSPKTGQPSNVYVECTLKYVMAFL---------------ATEMAEQQLSG----VLHIKLEADNDFYSQTAQLQARGLPVTAEALASLPTFLPCP-TVDGHLQVSKTGMGSSAAMITSLVGALLVTFHAVELPSADTPTICDASGNVVEG-----------MRIVHNLAQACHAAAQGKIGSGFDVAAAVYGTHVYTRFSPTVLADVLSA--------------TDGEEGVGD----------RLRFAVVATQ-WDLKREPIHLPQGFCLLMGDVQGGSSTPSMVKSVLKWRAAESTKDSSADLWGKLAQVNNSIRELLQELS--GLDGSGSSSSNSLSAAATYQHLSLLPSHQRG-------SVSSTASSSLCKLRDAFVQMRALLREMGDAAGVPIEPPEQTALANATAALPGVLCSGVPGAGGVDAIYAIVVHPSAASAVQDLWASWQT----VSSTGTTDAQRPA-------VCPLLLRATGAALGDG-IVCKVLDHLNKSTISDHV 533          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A7S2LKP2_9STRA (Phosphomevalonate kinase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKP2_9STRA)

HSP 1 Score: 295 bits (755), Expect = 2.350e-86
Identity = 233/615 (37.89%), Postives = 307/615 (49.92%), Query Frame = 1
Query:  214 ITVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFYTSVKWTDEQASIPPAGTVEES-RAFPQRLRMKVESPQFRMIYWYDCIFY---------EDGRLPTLLSSPDQAS---NIFVERTLTYVLGYLLEAGRAGAE----KIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCV-EAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRA-DPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDK-WAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVR------ELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW 1977
            ++VSAPGK LVAGGYLVL+ PN GVVLAA   RF+T++ +     +    G +  S  A  + + + V SPQF  I+ Y   +          +D     L   P  AS   N FVERTL    GYL ++   G E    +  + G +  E +AL        AIKLRADNDFYSQ + L  RGL  T + + +L PFL CP + +G V+V KTGMGSSAAL++S+VGALL FFG +  P      D  +    G +  +    E L + HNLAQ CHC AQGKVGSGFDVS+AV+G+H+YTRFS   I       +K        + ++       D  S   T   ++ + V +    WD     + LP    LLM DVCGGS +PSM +K+  W+  +  T  L+   W  L   N  IA LL+   T           G     + T      P    W EF     D+ MQ    L+ L+ AF ++R+ L+ MG  AGVP+EP  QT L DAT  LPGV+ AGVPGAGG DA+F I V     +G +      ++   WR    D+   DN              VCPL + A+ S    G L    L W
Sbjct:   64 VSVSAPGKALVAGGYLVLESPNPGVVLAADGCRFHTTIMFRQPCNTSKEGGVIGNSINATWESVPLDVYSPQFDKIFCYYLSYSLTGEDGDDSDDDGEDVLRLQPRTASYEPNKFVERTLLLAFGYLRQS--LGKELFHSRFRQHGLNSNERVAL--------AIKLRADNDFYSQINHLKQRGLDLTPQDVESLEPFLPCPKDSEGKVIVNKTGMGSSAALVTSIVGALLQFFGASSLPMI----DGEMTETVGQENQE----EGLRIAHNLAQICHCYAQGKVGSGFDVSSAVFGSHVYTRFSKGVI-------NKFIEDVEVRNETLK------DGLSLAETDSSQLFELVTDIDKKWDCTVQPINLPEGLELLMADVCGGSESPSMARKILEWKKKNRETGFLSGYYWKDLKRCNKKIASLLSDQYTKKPFCNGLVRDGPLIIASRTAEQWKKPMPSTWHEFDGSSWDVAMQ----LLDLRMAFLESRQNLKGMGTAAGVPVEPDSQTTLADATMKLPGVVAAGVPGAGGYDALFVIYVKGPPTNGGKSDQVRDDIGNLWR----DLSNQDNSTV-----------VCPLSVRAAGS----GGLCASSLQW 624          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A1V9Z1M7_9STRA (Phosphomevalonate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1M7_9STRA)

HSP 1 Score: 289 bits (740), Expect = 6.220e-86
Identity = 215/580 (37.07%), Postives = 281/580 (48.45%), Query Frame = 1
Query:  220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTL 1956
            VSAPGKVL+AGGYLVL+    G VLAA++ F+TSVK   +   I  +G           + + V SPQF           E+G       S +   N +VE+T+      L   G  GAE   + G    ++          L I L ADNDFYSQ+  L  RGL  T   LA LPPFL CP+ND G  ++ KTGMGSSAALI+SLVGA+L FF     P  +SS+  A                 +D+ HNLAQ  H +AQ K+GSGFDVSAA YG   Y RF P  I   ++  +K+ +  SA                        ++ C++ Q  WD       +P    ++MGDV  GS+T SMV+KV AW+ ADP     ++ +W +L + N  I    +S+          PT  D     +   L+A  S KW         +  Q    L+ ++  F + R LLR+MG  AGVPIEP  QT L+DAT  LPGVL  GVPGAGG DA+FAI +HP   S V   W+ W              A R         V  LL+  + SG +GG L
Sbjct:    4 VSAPGKVLIAGGYLVLEPLYAGAVLAASSCFHTSVKLIQKSTEILGSG-----------INVIVLSPQFHQTL--QGTLSENG----FTLSKESPQNPYVEKTMQVCAKAL--TGLLGAEFAQKLGKMAEKHS---------LEITLEADNDFYSQSEHLVKRGLAMTRANLAQLPPFLPCPLNDQGQAIIMKTGMGSSAALITSLVGAILRFFDAVTLPTTASSTTTA----------------GVDIVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQRYNRFHPDRIQSFVA--EKNLSNISA----------------------SELTHCIKTQSLWDNVVKPFGIPPNMHMIMGDVNAGSATVSMVRKVLAWKSADPKG---SQTLWESLNAKNMQIISCFDSL----------PTASDE----IWLRLAATTSAKWP-------SIHAQLGNALVAMQTTFYEIRALLREMGNGAGVPIEPTEQTALIDATMQLPGVLFGGVPGAGGNDAIFAIVLHPSVLSQVETFWSKWT-------------ATR---------VSALLVDVAPSGFQGGLL 469          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: B8BYG3_THAPS (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYG3_THAPS)

HSP 1 Score: 291 bits (746), Expect = 7.250e-84
Identity = 230/626 (36.74%), Postives = 313/626 (50.00%), Query Frame = 1
Query:  199 SDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQ---------------ASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEY---LALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNES-LDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADP-STATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSA------LPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHP-----ESESGVRELWAS-WRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW 1977
            S+   +TVSAPGKVL+AGGYLVL+ PN GVVLAA   RF+T+V +  +  +I    T+  +    + + + V SPQF  ++ Y        RL  LL S D                 SN FVER+L   L Y            ++    L E+   L    +    LAIKLRADNDFYSQ + L  RGL  T + + +L PFL CP ++ G +VV KTG+GSSAAL++SLVGALLSFF     P         +  D G++  +  ++E  L + HNL+Q CHC AQGKVGSGFDVS+AVYG+HIYTRFS + I   L + D           +  G   G D    +   L+ +      +  WD     + LP    LLM D+CGGS +PSM KK+  W+ +      L    W  L   N+ I  L+++     LAS+    G       +    +A      +PS  W EF     D+      +L+ L+ AF ++R+ L+ MG+ A VP+EP  QT L +AT  LPGV+ +GVPGAGG DA+F + V       +    VR+  A+ WR            D   Q +      VCPL + A+  G E G L    L W
Sbjct:  187 SNPSTVTVSAPGKVLIAGGYLVLESPNPGVVLAAKGCRFHTTVMFR-QPFNIGVGDTLGLNAVGMESIPLDVYSPQFDKVFSY--------RLSYLLGSQDDDDVAIRLQPRHPETHTSNKFVERSLLLALSY------------IQQSIGLQEFHSKLRQQDDNGGALAIKLRADNDFYSQITHLKQRGLDLTPKNIESLEPFLPCPKDEMGNLVVNKTGLGSSAALVTSLVGALLSFFDVVSLP---------VTKDGGTNSNNKELHEEGLRIAHNLSQICHCHAQGKVGSGFDVSSAVYGSHIYTRFSENVINRFLESVD-----------AQKGFEGGLDLTGILSQQLRELVNDTTKE--WDCAVTPISLPQGLELLMADICGGSESPSMAKKILEWKKNNRKVGFLDDYYWKDLKRCNNKIVSLISN----QLASQTVLKGLQRDGPVILASRTAEQWKKPMPS-SWHEFEGSSWDI----AGKLLDLRMAFMESRQNLKGMGKAADVPVEPDEQTNLANATMKLPGVVASGVPGAGGYDALFVVYVKGTVTCVDKSDSVRDNIANLWR------------DFSNQNDTT---VVCPLSVKAAGFGGENG-LCASALRW 744          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A1V9YNS4_9STRA (Phosphomevalonate kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNS4_9STRA)

HSP 1 Score: 282 bits (721), Expect = 3.990e-83
Identity = 210/545 (38.53%), Postives = 273/545 (50.09%), Query Frame = 1
Query:  214 ITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLS------SPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQ-LKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASW 1824
            + VSAPGKVL+AGGYLVL+    G VLAA++RF+T+V       ++P AG           L + + SPQF               L  +LS      SP+  +N +VE+TL      L   G  GA      GA+L    A        L I L ADNDFYSQ+SQL  RGLP T + LATLP FL CP++ DG  ++ KTGMGSSAALI+SLVGA+L FFG    P  +S++ +                  +D+ HNLAQ  H +AQ K+GSGFDVSAA YG   Y RF P  I   +                  G  N  D ++A       ++ C+ AQ  WD       LP   R++MGDV  GS+T SMV++V AW+ ADP  +T    +W  L + N  I     ++   S                V   L+   S  W +   E        V  ++Q ++A F + R LLR MG  AGV IEP  QT L+DAT  +PGVL  GVPGAGG DA+FA+ +HP     V   WA+W
Sbjct:    4 VRVSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTVSLA--APTVPTAG-----------LAVVICSPQFHQT------------LSGVLSADVFELSPESPANPYVEKTLQVCAKAL--HGLLGAS----FGANLASLSA-----EHSLLITLEADNDFYSQSSQLLERGLPVTRDNLATLPAFLPCPVDADGRAIIMKTGMGSSAALITSLVGAVLRFFGSVTLPTPTSTTSSP----------------GVDVVHNLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFHPDRIKAFV------------------GQRNLADLSAA------ELATCISAQELWDNVVKPFGLPPSMRMIMGDVNAGSATVSMVRQVLAWKSADPVGSTA---LWEKLNAKNMAIVAQFEALPVVS--------------PHVWAQLATTTSASWPQVHPE--------VGTILQAMQATFYEIRSLLRSMGTQAGVGIEPAEQTALIDATMQVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVEAFWATW 447          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: K0TGY4_THAOC (GHMP_kinases_N domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TGY4_THAOC)

HSP 1 Score: 286 bits (731), Expect = 5.890e-82
Identity = 239/623 (38.36%), Postives = 323/623 (51.85%), Query Frame = 1
Query:  193 DKSDEGCI-TVSAPGKVLVAGGYLVLDRPNVGVVLAATA-RFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDG--RLP--TLLSSPDQAS---NIFVERTLTYVLGYLLEA--GRAGAEKIVETGASLMEYLALAGEGARV-LAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEI---ADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAW-RADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSA------LPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVH-PESESG----VRELWAS-WRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW 1977
            D SD G I TVSAPGK LVAGGYLVL++PN G+VLAA+  RF+TS+ +     S           A    + + + SPQF  ++ Y   +  +G   +P   L   P +A    N FVER+L   LGYL ++   +A  E++    ++          G RV LAIKLRADNDFYSQ + L  RGL  T   LA L PFL CP +  G +VV KTGMGSSAAL++SLVGALL+FFG             A+++ E +D    +  E L L HNLAQ  HC AQGKVGSGFDVSAAVYG+H+YTRFS + I    ++LS+ ++  A     + S D               L R+    ++   WD     + LP    LLM DVCGGS +PSM +K+  W R+   T  +    W  L   N+ IA LL    TT+   +    G +     +    +A      +PS  W EF     D+ ++    L+ L+ +  +AR+ L+ MG  A VP+EP  Q+ L + T  LPGV+ AGVPGAGG DA+F + V  P++  G    VR+   S W+               R  E+     VCPL + AS  G++ G L    + W
Sbjct:  164 DASDMGTIITVSAPGKALVAGGYLVLEQPNPGLVLAASGCRFHTSITFRPPHTSQVSTVIGASINAAWSSIPLDIYSPQFDKVFSYYLSYSMNGDQNVPESVLELQPRKAPHEPNKFVERSLLLSLGYLRQSLGPKAFHERLHPMNSN----------GGRVALAIKLRADNDFYSQIAALKDRGLDLTPSNLAALEPFLPCPKDATGKLVVNKTGMGSSAALVTSLVGALLTFFG-------------AISISEPTDDG-VKQQEGLRLAHNLAQISHCYAQGKVGSGFDVSAAVYGSHVYTRFSKTIIHPFLESLSSANEGEALQLTGTLSRD---------------LVRLVD--DSDRAWDCTVHPVALPPGLELLMADVCGGSESPSMARKILDWKRSKRRTGFMDDYYWKDLKRVNAKIARLL----TTTFKEQTFLDGLERDGPVILSTRTAEQWKKPMPS-SWHEFEGSSWDVALK----LLDLRMSILEARQNLKGMGNAASVPVEPAEQSLLANETMKLPGVVAAGVPGAGGYDALFVVYVEGPKTNDGSSDHVRDSICSLWK---------------RISEENSATTVCPLSVRAS--GIDSG-LRASDVEW 718          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A024UL17_9STRA (Phosphomevalonate kinase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UL17_9STRA)

HSP 1 Score: 276 bits (707), Expect = 5.570e-81
Identity = 218/588 (37.07%), Postives = 277/588 (47.11%), Query Frame = 1
Query:  220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSV---KWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLP--TLLSSPDQASNIFVERTLTYVLGYLLEA-GRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYT 1962
            VSAPGKVL+ GGYLVLD    G V+AA++RFYTS+      D+  ++ P      S A P R    + SPQF             G L   +   SPD   N +VE+T+   +  L+   G A  E+ V     L + L          AI L ADNDFYSQ  QL  +GLP   + LA+LPPFL   ++D G   ++KTGMGSSAALI+SLVGALL FFG A  P D+   DA+  V               DL HNLAQ  H +AQ K+GSGFDVSAAVYG  +Y RF P  I   L                   +    DP          ++        WD       LP    L+MGDV  GS+T SMV+KV AW+ ADP     +  +W  L  +N  I  LL  + T                    + LS L   +W     E  D  +  +  L  ++  F   R  LRDMG+ AGV IEP  QT L+DAT  +PGVL AGVPGAGG DA+FAI +H +    V   W++W+                         V  LL+ A+ +G  GG L T
Sbjct:    3 VSAPGKVLITGGYLVLDPAFSGAVIAASSRFYTSITLESLKDDDVALAP------STAVPVR----IHSPQFHQSM--------QGVLTASSFHISPDSIPNPYVEKTIRICVVALVGLLGAAAFERHVHDMLRLRQSL----------AITLEADNDFYSQRDQLHNQGLPVNRKTLASLPPFLPSLLDDAGHAKISKTGMGSSAALITSLVGALLGFFGAANLPTDAGPHDASTQV-------------GADLVHNLAQIAHSIAQEKIGSGFDVSAAVYGNQLYNRFRPDAIEPFLKE-----------------NIEQVDP----------VALAAHLTTPWDNVVRPFCLPDGMHLIMGDVNAGSATVSMVRKVLAWKSADP---VESAALWEKLNGSNQQIPNLLEQLHTLQTTKAN----------GTLEKLSHLSHHQW-----ESTDADVGRL--LSTMRQTFLTIRGYLRDMGDLAGVQIEPADQTALIDATMDVPGVLFAGVPGAGGNDAIFAIVLHADVLDRVEAFWSTWKTTS----------------------VSALLVDAAVNGFRGGLLRT 480          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A067BR68_SAPPC (Phosphomevalonate kinase n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BR68_SAPPC)

HSP 1 Score: 270 bits (689), Expect = 1.880e-78
Identity = 202/546 (37.00%), Postives = 268/546 (49.08%), Query Frame = 1
Query:  220 VSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLS------SPDQASNIFVERTLTYVL----GYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDDGAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWR-ADPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASW 1824
            VSAPGKVL+AGGYLVL+    G VLAA++RF+T+V      AS+ P+            L + V SPQF  +            L  +LS      SP   +N +VE+TL        G L  A  A    + +T +               L I L ADNDFYSQ++QL  RG P T E LA LP FL CP++  G  V+AKTGMGSSAALI+SLVGA+L FFG    P   S++                    +D+ H+LAQ  H +AQ K+GSGFDVSAA YG   Y RFSP  +   ++  + SA    AP+                      ++ C++++  WD       LP    ++MGDV  GS+T SMV++V AW+ ADP+    +  +W  L + N  I     ++          P   D     V   L+  PS  W         L       L+ ++A F + R LLR MG  AGV IEP  QT L+DAT  +PGVL  GVPGAGG DA+FA+ +HP     V   W++W
Sbjct:   10 VSAPGKVLIAGGYLVLEPQYAGAVLAASSRFHTTVSL---DASVTPSPA----------LAVTVHSPQFHQV------------LTGVLSADAFELSPQSPANPYVEKTLQVCAKALHGLLGPAFGAKLASLAKTHS---------------LRITLEADNDFYSQSAQLLERGQPVTREHLAKLPAFLPCPLDASGTPVIAKTGMGSSAALITSLVGAVLRFFGAVTLPTAQSAA----------------ATPGVDIVHHLAQIAHSIAQDKIGSGFDVSAAAYGNQCYNRFSPERVQSFVAQKNLSAI---APAD---------------------LAACIQSR--WDNVVKAFGLPHNMHMIMGDVNAGSATVSMVRQVLAWKKADPAG---SHALWETLNAKNMQIVAQFEAL----------PAVADD----VWARLAEAPSTSWVH-------LNAVLGAALLAMRATFEEIRHLLRTMGSAAGVAIEPEEQTALIDATMRVPGVLFGGVPGAGGNDAIFALVLHPSVLPRVETFWSTW 449          
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Match: A0A7S4A8Z6_9STRA (Phosphomevalonate kinase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8Z6_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.020e-78
Identity = 214/586 (36.52%), Postives = 285/586 (48.63%), Query Frame = 1
Query:  199 SDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVKWTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLPTLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALAGEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDD-GAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGSDGPDSRVNESLD-LTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSPSEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEAQGGWDAER-GQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRA-DPSTATLAKEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALPSDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPPVQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVH-PESESGVRELWASWRFGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGL 1941
            SD   +TVSAPGK+L+AGGYLVL+ PN G V+AA  RFYTSV   ++  S      ++      Q +R++VESPQF   + Y    YE      + S  +++ N FVE++L   L YLL++ +  A        S +E L             +RADNDFYS    LS       AE +A LP FL CPI+ D G VVV KTG+GSSAAL +SLVGAL+ +F ++                        R  E L  + HNLAQ CHC AQGKVGSGFDVSAA +GTH+Y RF    + D L   D+            + + N  D    +   L+++ + V     W  +    L LP   +L++ DV GGS +PSM + V  W+A + +T       WS L   N  I   +       L +++     D         LS LPS  W+            S   L+ L+  F   R+ LR MGE A VPIEPP Q +L DAT  LPGV+ A VPGAGG DAV  + ++ PE    + ELW+SW+                         VCPL + A + GL
Sbjct:    6 SDIPGVTVSAPGKILLAGGYLVLEAPNAGFVVAADKRFYTSVNAGNDDNSNDDGDEIK------QPMRIRVESPQFHSTWNYT---YEAPNCHLVPSPNNESVNPFVEKSLRVCLIYLLQSSKLTASTGDTASPSSLEIL-------------IRADNDFYSVLPHLSEDSKKTPAE-VAALPKFLPCPIDPDTGKVVVHKTGLGSSAALTTSLVGALVHYFLRSS---------------------QERKEEHLSGIIHNLAQICHCHAQGKVGSGFDVSAACHGTHVYRRFPKCLLPDLLQLLDR-----------FEINENAKDQPVLLGETLKKLVELVP----WKEDMVAPLNLPNDLQLILADVRGGSESPSMARTVLKWKAAEKNTDNNEVPYWSPLSRLNPKIVEAIQ------LLAKEGTDNVD------YDSLSKLPSSDWS----------TDSDSPLVSLRDTFLNIRKELRSMGEAADVPIEPPPQQELCDATSKLPGVVTALVPGAGGYDAVACLYINRPEVVRSIGELWSSWKSP----------------------VVCPLAVRAGDEGL 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig946.17207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ8_ECTSI2.410e-24663.91Phosphomevalonate kinase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YYC0_9STRA5.000e-13144.98Phosphomevalonate kinase n=1 Tax=Tribonema minus T... [more]
A0A7S2LKP2_9STRA2.350e-8637.89Phosphomevalonate kinase n=1 Tax=Skeletonema marin... [more]
A0A1V9Z1M7_9STRA6.220e-8637.07Phosphomevalonate kinase n=1 Tax=Thraustotheca cla... [more]
B8BYG3_THAPS7.250e-8436.74GHMP_kinases_N domain-containing protein n=1 Tax=T... [more]
A0A1V9YNS4_9STRA3.990e-8338.53Phosphomevalonate kinase n=1 Tax=Achlya hypogyna T... [more]
K0TGY4_THAOC5.890e-8238.36GHMP_kinases_N domain-containing protein n=1 Tax=T... [more]
A0A024UL17_9STRA5.570e-8137.07Phosphomevalonate kinase n=3 Tax=Aphanomyces invad... [more]
A0A067BR68_SAPPC1.880e-7837.00Phosphomevalonate kinase n=3 Tax=Saprolegnia TaxID... [more]
A0A7S4A8Z6_9STRA2.020e-7836.52Phosphomevalonate kinase n=1 Tax=Pseudo-nitzschia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig946contigH-paniculata_contig946:17845..23692 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score718.4
Seed ortholog evalue2.8e-204
Seed eggNOG ortholog2880.D7FMZ8
Preferred nameERG8
KEGG rclassRC00002
KEGG koko:K00938
KEGG ReactionR03245
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004631,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0006066,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006696,GO:0006720,GO:0006721,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009987,GO:0010142,GO:0016114,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019287,GO:0019637,GO:0019693,GO:0031388,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045337,GO:0045338,GO:0046165,GO:0046483,GO:0046490,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:0097384,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902767
EggNOG free text desc.phosphomevalonate kinase activity
EggNOG OGsCOG3890@1,KOG4519@2759
Ec32 ortholog descriptionPhosphomevalonate kinase
Ec32 orthologEc-25_002910.1
EC2.7.4.2
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons10
Model size2313
Cds size1806
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig946.17207.1prot_H-paniculata_contig946.17207.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig946 18175..23515 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931175.713293-UTR-H-paniculata_contig946:17844..181741622931175.713293-UTR-H-paniculata_contig946:17844..18174Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig946 17845..18174 -
1691481624.558858-UTR-H-paniculata_contig946:17844..181741691481624.558858-UTR-H-paniculata_contig946:17844..18174Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig946 17845..18174 -
1622931175.903618-UTR-H-paniculata_contig946:23515..236921622931175.903618-UTR-H-paniculata_contig946:23515..23692Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig946 23516..23692 -
1691481624.6728458-UTR-H-paniculata_contig946:23515..236921691481624.6728458-UTR-H-paniculata_contig946:23515..23692Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig946 23516..23692 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931175.7257419-CDS-H-paniculata_contig946:18174..185071622931175.7257419-CDS-H-paniculata_contig946:18174..18507Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 18175..18507 -
1691481624.5697367-CDS-H-paniculata_contig946:18174..185071691481624.5697367-CDS-H-paniculata_contig946:18174..18507Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 18175..18507 -
1622931175.7381902-CDS-H-paniculata_contig946:18926..190671622931175.7381902-CDS-H-paniculata_contig946:18926..19067Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 18927..19067 -
1691481624.578602-CDS-H-paniculata_contig946:18926..190671691481624.578602-CDS-H-paniculata_contig946:18926..19067Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 18927..19067 -
1622931175.7531056-CDS-H-paniculata_contig946:19341..195151622931175.7531056-CDS-H-paniculata_contig946:19341..19515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 19342..19515 -
1691481624.5921466-CDS-H-paniculata_contig946:19341..195151691481624.5921466-CDS-H-paniculata_contig946:19341..19515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 19342..19515 -
1622931175.767891-CDS-H-paniculata_contig946:20072..203961622931175.767891-CDS-H-paniculata_contig946:20072..20396Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 20073..20396 -
1691481624.6032064-CDS-H-paniculata_contig946:20072..203961691481624.6032064-CDS-H-paniculata_contig946:20072..20396Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 20073..20396 -
1622931175.7802494-CDS-H-paniculata_contig946:20590..208261622931175.7802494-CDS-H-paniculata_contig946:20590..20826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 20591..20826 -
1691481624.6116319-CDS-H-paniculata_contig946:20590..208261691481624.6116319-CDS-H-paniculata_contig946:20590..20826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 20591..20826 -
1622931175.7940755-CDS-H-paniculata_contig946:21005..210841622931175.7940755-CDS-H-paniculata_contig946:21005..21084Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 21006..21084 -
1691481624.6204185-CDS-H-paniculata_contig946:21005..210841691481624.6204185-CDS-H-paniculata_contig946:21005..21084Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 21006..21084 -
1622931175.8145401-CDS-H-paniculata_contig946:21525..217301622931175.8145401-CDS-H-paniculata_contig946:21525..21730Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 21526..21730 -
1691481624.6299655-CDS-H-paniculata_contig946:21525..217301691481624.6299655-CDS-H-paniculata_contig946:21525..21730Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 21526..21730 -
1622931175.829564-CDS-H-paniculata_contig946:22100..222491622931175.829564-CDS-H-paniculata_contig946:22100..22249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 22101..22249 -
1691481624.640572-CDS-H-paniculata_contig946:22100..222491691481624.640572-CDS-H-paniculata_contig946:22100..22249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 22101..22249 -
1622931175.8454235-CDS-H-paniculata_contig946:22574..227011622931175.8454235-CDS-H-paniculata_contig946:22574..22701Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 22575..22701 -
1691481624.6520166-CDS-H-paniculata_contig946:22574..227011691481624.6520166-CDS-H-paniculata_contig946:22574..22701Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 22575..22701 -
1622931175.8825777-CDS-H-paniculata_contig946:23477..235151622931175.8825777-CDS-H-paniculata_contig946:23477..23515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 23478..23515 -
1691481624.662752-CDS-H-paniculata_contig946:23477..235151691481624.662752-CDS-H-paniculata_contig946:23477..23515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig946 23478..23515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig946.17207.1

>prot_H-paniculata_contig946.17207.1 ID=prot_H-paniculata_contig946.17207.1|Name=mRNA_H-paniculata_contig946.17207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=602bp
MRSINDKSDEGCITVSAPGKVLVAGGYLVLDRPNVGVVLAATARFYTSVK
WTDEQASIPPAGTVEESRAFPQRLRMKVESPQFRMIYWYDCIFYEDGRLP
TLLSSPDQASNIFVERTLTYVLGYLLEAGRAGAEKIVETGASLMEYLALA
GEGARVLAIKLRADNDFYSQTSQLSVRGLPCTAEALATLPPFLECPINDD
GAVVVAKTGMGSSAALISSLVGALLSFFGKARFPCDSSSSDAALNVDEGS
DGPDSRVNESLDLTHNLAQACHCVAQGKVGSGFDVSAAVYGTHIYTRFSP
SEIADTLSAGDKSAARYSAPSSSVDGHANGCDPASAIPTPLQRISKCVEA
QGGWDAERGQLRLPFCFRLLMGDVCGGSSTPSMVKKVQAWRADPSTATLA
KEIWSALGSTNSTIAGLLNSVTTTSLASRKHPTGGDSSFEAVTKHLSALP
SDKWAEFMQEDRDLRMQSVEQLIQLKAAFAKARRLLRDMGEHAGVPIEPP
VQTKLVDATCALPGVLCAGVPGAGGVDAVFAITVHPESESGVRELWASWR
FGGEDIVQADNMDADRQGEDVGGGFVCPLLLSASESGLEGGTLYTRKLSW
E*
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mRNA from alignment at H-paniculata_contig946:17845..23692-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig946.17207.1 ID=mRNA_H-paniculata_contig946.17207.1|Name=mRNA_H-paniculata_contig946.17207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5848bp|location=Sequence derived from alignment at H-paniculata_contig946:17845..23692- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGCGAACAGACTAGCCTTGGCTGGCGGAACTGACCTGTCTTTGCCTTTC TTGTGCTGTTTCAGACATCAAATCCCTGAGCATAGGTATCGATCGCAATA TCAATCTAAATTTCAAAGCTTCGGGCGGGCAGTAATTGAGAAGACAGAAC AAAGCACAGAATTCGTAACAGGAGGATATGCGGTCCATCAACGACAAAAG TGACGAGGGATGCATGTGAGAACTTTACGAATACAACGCGGTTCCCTTGG ATGTGGGATCACTAGTTGAGGCATTAATGGCATAACGAGCTCCATCTCGT TCTGTGTCTGTTCGTTGCACGGTATCAACAGAATTGTAGATGTGCGTATT TTGCCTGAGGCGCGTCTGTGTGGGGGAGGGGTGTTATACACCGTGTGGTT GACAAATAATATTTAGTCGAAAAAATGTCCACTTTTCCAGGAGGAGTGAT TAATGCTGAAGAACGGTCGCATGCCAGTAGTGTCGAAACGAGGCAAGAAA ATGGAAACGAAAATGAGCATAAAAAATTTCGGCTCCACGCTTACCAAGGA TAATCGACTGCACGTTGACCAACGGCTGAGCGCTAAAGCGAATCTGAATT TTCCTTCCTTCGATAATCGACAAAAAACGGTCCAGGCCAACTGCAACAAG AAATCAATTTGAATCCTTGACCGGCGTGAAGCTGGCTTTCAGGAGGGTAA TGCATTATTGGGAAATCTGGGGGTACGGAGGTGCACCTAACGGACATGCT GGGACAGGGTCAGTTAATCACCAATAAAGAGATTGTGGGTGAAGTTTGAA GCCCATGTATGAGGTGAATGTGTTTTCCCCAATCCGAGCGGATGTTCACC CCACTGTATTGTTGCTGTTCATAAATATGTTTACTTGTAATAGACAATGA AAGCACACATGCACACAGCTATGACTGTAACCACGGAGATCCCCACCCAC GTTCGTTTAATTCGTATCGATGTCCTTGTTTCTTATTTGAGAACCGTTTC GGCGCCGGGCAAGGTGCTGGTTGCCGGTGGTTATTTGGTGCTCGATAGGC CGAATGTGGGCGTGGTATTGGCGGCAACTGCAAGGTTTTACACATCCGTA AAATGGACAGATGAGCAGGTGCGCACGCTGCAAGTAAACACGCCATACCC ACGATAACGGGGTACGATCTGGTTGGGGATTAGCTTTGATTTTTCAGCGT TTTTCAGTCCAGAAGAAACATGGCGCAACGAGCGACTTTTTGCACCTTGC CCTATTGATTTGAAAGATCATCGGCACCGATGATCAAACGTTGGTCGCCG AGAATTCCCATCGGTAGAATTTAAGCGGTGAAAGTAGATACACCCAACGT CGGAATTCCACTTTTGATGCAGTTCCAAAGATCAAACGATGTTGCACTTT CCATTTGACACGTCATTATGCGACTTGCAACGTACGACGGCAGGCGTCAA TTCCTCCCGCGGGAACTGTTGAGGAGTCGCGGGCGTTTCCGCAACGACTC CGAATGAAGGTGGAGAGCCCTCAGTTCCGCATGATTTACTGGTATGACTG CATATTCTACGAAGACGGGAGGCTGCCGACTCTCCTTTCGAGGTAAGACG GGAATAGGACGGACAAAGGAACCTTGCAGCAAAGATTGGGGCTGTGCCCT GGGATGGGTATACGTAGTGATGGTCTCGCACGTTTGCATAGAGCACGATA CAATTTTGAGGGCGAGAGTGCTGTCACATTACAGCACGCCGAGGAACTTG GATATGTGACCAACCATTCAACTCAAGTCGCCGACATTTTCCATGAGTAT CATCAGGGATTCATACGCTATCTGCCAGAAGACATCAGTGTGGATCAACC CAACGCTGTAACTTGAGCACCAAACACTCTCGCTTGACCTGGACTCTAAG TGTATCCAATGTTTGCTTATCAAGATGTTTCGCGTCTTCTGATGCCATCC ACATCTACTCAGTCCGGACCAAGCCTCAAACATTTTCGTGGAACGCACTC TCACGTACGTGCTGGGCTACCTTCTTGAGGCTGGTAGAGCAGGAGCGGAG AAGATAGTCGAGACGGGTGCGTCGCTAATGGAATACCTTGCACTTGCTGG CGAAGGCGCTCGTGTTTTAGCGATCAAACTCCGAGCTGACAATGACTTCT ACTCGCAGACATCACAGGCAAGTCAACATAGATGACATGTGAATGAGAAC GCCACTACCGTAAAACCGCTCGGAGCCATACTTCCTGTTTGCATGCAGTG ATGTGTGTATAGAAGGAGCATTGCGCGGGCACAATAATGACAAAATCTAC AGTGCTTCTCCTATCTGTACTCATATGTGTTGCCTACGTCGCCATGAAAA ATCCCGGTTGCCCTTTGGGCACACCTAGAAAACACAGTGCAGGTGCTACT AGGGTTGATTCAAAGTCTCTTCCCGGGGAACGTTTCGAAACGTTGCACCT ACTTTATCGGACTTGTGGCGTGTTTCCGGCTCCATAACATGCCATGCACT GTAGATGACCCATACTGTATCTCGTCGAGAAAATGTGTCGCCCTCAGACT GTATGCAATGTGTAACATCCTCCCATTCTCCAATTGCGTGTACCATTGAT TTTGTCAGTTGAGTGTCCGTGGCCTGCCTTGTACGGCGGAGGCGCTTGCT ACTTTGCCACCGTTCCTGGAGTGCCCTATTAATGATGGTAAGTCGCTCAG CACAATGGACGGGCCAATGCTAGCCGCAAAGTTCAAGCTTTACTGAAAAC AGGATACATGCACGGTAGTACGTTCGTTGATGAAGTAAAACACGGTGCGA ACTCGGTGAAAGAAGCGACTCACAGTCAGGGTAATCACCTGTTTTGTTTT GTTGAACGGTTCGCAGACGGTGCTGTGGTAGTGGCGAAGACAGGCATGGG AAGCTCTGCGGCACTCATCTCGTCCTTGGTGGGCGCTCTATTGTCCTTTT TCGGGAAAGCGCGTTTCCCGTGCGATAGCAGCTCGTCGGATGCTGCTCTA AACGTCGACGAAGGGTCTGACGGACCTGACTCTCGAGTAAACGAGAGCTT GGACTTGACCCACAACCTGGCCCAAGCCTGCCACTGCGTCGCTCAGGGAA AGGTGGACTTCCAGAGCTATTCAAGCATGCGGCGGTATTATTTTGGATTG TATCTTCTTTCAACCCGTCGGCACACACTACTTGTTCAATCTTATTTTGG GGGTCTCGCCGGATGAGTTAAACCTCAGCTGCTTCGACGACTTGTTCATC CAAAAGTCTGAAAATGCGTTCGTTGTTTCTGTTGAACTCTGCTCAGGTTG GCAGTGGCTTCGATGTCTCTGCGGCGGTATATGGTACCCACATATATACA CGGTTCTCGCCAAGCGAAATTGCCGACACCCTCTCCGCTGGCGATAAATC GGCGGCTAGATACTCGGCCCCTTCATCTTCCGTAGATGGACATGCGAATG GTTGTGATCCAGCTTCTGCCATTCCCACCCCACTCCAGCGTATTTCTAAG TGTGTTGAGGCCCAAGGAGGTTGGGACGCAGAGAGGGGCCAGTTGCGACT TCCGTTCTGCTTCCGACTGTTGATGGGGGATGTTTGCGGGGGCTCGTCCA CCCCATCGATGGTCAAAAAGGTACGTTTTAAGTGAAGAAACGTCTATTGT GGCAAGCAAGCATTGCAAATGCTGATCAGGCAGCAAATGTGGAAAGTTTC CGCATGGACTTCTCTCCACTTTTTGATGGGTTGCTTTATGGAATGACACA CAGCGTCACTGAACAATGCCAAGATACGGCGTCGTTTCGATCTACTGTCG TTTGCTTTGTTTACGATCTCTAGATGTTCGCAATCTCTTCAATCAGTTTC TTCGTTTGTCACAAACGTATTTTCAGTGCGAAGTTTGGTTGCTCAGGGAT GAAAGTTTCGCTGTGTTGCGGGCGGTAGTGTATTTTTCGCCAAGACATGT TTAAGTCGAACTCAATGGGCTTCGCCGTCTCTCTCGAGAATTCGAAATAT ACCACAAGGTAGACCTTTGGTTTCATCCTGGTCACGAGAGCGGTGATCTG CACTTTCGACTCTAGATCAGACTATGTGTTATTGGTAAACAACACTTGTA CTGAGCCTCCACAACCAATTTCCACTCCAGATGTAGCCCAGCGTTTCCTT GATTTTGGCTGGGTGACTTGTTCACAGGTGCAGGCGTGGCGGGCAGACCC GTCAACCGCCACTCTGGCCAAGGAGATTTGGTCAGCGCTAGGTTCCACCA ACTCCACGATCGCGGGTCTGCTCAACAGTGTAACGACCACTTCATTGGCA TCTCGAAAACATCCCACCGGAGGTGACAGTAGCTTCGAGGCGGTAACAAA GGTACGCACGTTGTTATGTATTAAGCACGTTCATTGACTCGTCACTGCGT TCATAGTTGGCAAAATAGCCTGAATTAACACGGCGACCGCGGCGAACCCA GAGAGAGCACTGCACGAGTAGCCAAACGAAACCTGACTGGAAACCTTCTG CCAGTTTTGTTGTTTTTCCCTGATCTCACTGCGCCCGGCTCTGGTGAGAA TGCGCAGACTTGTTGACGCGGGACTACATACCCCCCCTCCCTATTTGTGC TGTGTATGTCCACGTTATTGTGCAGCACCTATCCGCCCTGCCGTCGGACA AATGGGCTGAATTCATGCAGGAAGATAGGGACCTGAGGATGCAATCGGTG GAGCAGCTGATCCAGCTCAAGGCAGCATTCGCCAAGGCCCGTCGACTCTT GCGCGACATGGGAGAGGTATGAAGTGAATTATCAATACTAAGTAGGTAGT GAATAGTCACGGGCAAGGAGAAACTGACAACGGACGGACTTGGAGCTGAA CGCCCGGTAATATCAGCAATAAAGTGGGCTATCAGCAATAAATTTCTCCG TTTCATGTGGTGTGTTAAGTATGGACTACAAGCGCAGTGTGTGATATTGT GGTGTGGTTACTTACCTCGAACCGGCCACGATCTAAATTCGATTACATGG AACTCCGATGCCTCGTCTGCGGGATCTTCCGATCAATGGTTGGTTGTGTG TCACTCAGTGAAAAGTAGGGCAGGGTCTGCTAAAGTGCCTAATCCTGAAA AACAGAGGAAACATGTCTTTCACTAGTTATGACATATTTTGTCACAGTAT CGCCAAACGATATTTCCCGTTTCTTGTTCCGGCAGCATGCTGGGGTGCCC ATCGAACCTCCTGTCCAGACAAAATTGGTGGACGCGACATGCGCCCTGCC TGGGGTGCTATGTGCTGGAGTCCCTGGAGCAGGTGGCGTCGACGCGGTTT TCGCGATTACGGTACACCCAGAGTCGGAGAGCGGCGTACGAGAACTTTGG GCTAGTTGGCGATTTGGAGGCGAAGATATTGTCCAAGCAGATAATATGGA TGCAGATAGGCAGGGCGAGGATGTTGGGGGAGGATTTGTGTGTCCCCTAT TGCTTTCAGCTTCGGAGAGCGGCCTTGAAGGTGGCACGTTGTACACGCGA AAGCTATCTTGGGAGTAGGTCGGAACGATTCAATCACATCTCTTATGTGT TGACGCTTTTTCAGCGCGGATGTGTGGCGTGGTGTTTTTTTATCGAGCAA GCAAGCAGGTGTCGTTAACTGAAGAAAGGGTACAATGTCATTGATGTCAT CAGGCTCTCGACTTCACACCCCATGTATTAGTTGTAAACGTGCTCTTTCC CCCGAAGAGCGTTGCTCCAAGGATTTCATGGTACAAAGTAAGAATGTTTT CCTCGTCGAGAGCAATCCCTGAGATGCGTATCAGGCAACATATAGCAACA ATATATAAACTTTGTAAAAAGGAACGTCCCGTTTGTTCACGAATTCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig946:17845..23692-

>mRNA_H-paniculata_contig946.17207.1 ID=mRNA_H-paniculata_contig946.17207.1|Name=mRNA_H-paniculata_contig946.17207.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3612bp|location=Sequence derived from alignment at H-paniculata_contig946:17845..23692- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGTCCATCAACGACAAAAGTGACGAGGGATGCATATGCGGTCCATC
AACGACAAAAGTGACGAGGGATGCATAACCGTTTCGGCGCCGGGCAAGGT
GCTGGTTGCCGGTGGTTATTTGGTGCTCGATAGGCCGAATGTGGGCGTGG
TATTGGCGGCAACTGCAAGGTTTTACACATCCGTAAAATGGACAGATGAG
CAGAACCGTTTCGGCGCCGGGCAAGGTGCTGGTTGCCGGTGGTTATTTGG
TGCTCGATAGGCCGAATGTGGGCGTGGTATTGGCGGCAACTGCAAGGTTT
TACACATCCGTAAAATGGACAGATGAGCAGGCGTCAATTCCTCCCGCGGG
AACTGTTGAGGAGTCGCGGGCGTTTCCGCAACGACTCCGAATGAAGGTGG
AGAGCCCTCAGTTCCGCATGATTTACTGGTATGACTGCATATTCTACGAA
GACGGGAGGCTGCCGACTCTCCTTTCGAGGCGTCAATTCCTCCCGCGGGA
ACTGTTGAGGAGTCGCGGGCGTTTCCGCAACGACTCCGAATGAAGGTGGA
GAGCCCTCAGTTCCGCATGATTTACTGGTATGACTGCATATTCTACGAAG
ACGGGAGGCTGCCGACTCTCCTTTCGAGTCCGGACCAAGCCTCAAACATT
TTCGTGGAACGCACTCTCACGTACGTGCTGGGCTACCTTCTTGAGGCTGG
TAGAGCAGGAGCGGAGAAGATAGTCGAGACGGGTGCGTCGCTAATGGAAT
ACCTTGCACTTGCTGGCGAAGGCGCTCGTGTTTTAGCGATCAAACTCCGA
GCTGACAATGACTTCTACTCGCAGACATCACAGTCCGGACCAAGCCTCAA
ACATTTTCGTGGAACGCACTCTCACGTACGTGCTGGGCTACCTTCTTGAG
GCTGGTAGAGCAGGAGCGGAGAAGATAGTCGAGACGGGTGCGTCGCTAAT
GGAATACCTTGCACTTGCTGGCGAAGGCGCTCGTGTTTTAGCGATCAAAC
TCCGAGCTGACAATGACTTCTACTCGCAGACATCACAGTTGAGTGTCCGT
GGCCTGCCTTGTACGGCGGAGGCGCTTGCTACTTTGCCACCGTTCCTGGA
GTGCCCTATTAATGATGTTGAGTGTCCGTGGCCTGCCTTGTACGGCGGAG
GCGCTTGCTACTTTGCCACCGTTCCTGGAGTGCCCTATTAATGATGACGG
TGCTGTGGTAGTGGCGAAGACAGGCATGGGAAGCTCTGCGGCACTCATCT
CGTCCTTGGTGGGCGCTCTATTGTCCTTTTTCGGGAAAGCGCGTTTCCCG
TGCGATAGCAGCTCGTCGGATGCTGCTCTAAACGTCGACGAAGGGTCTGA
CGGACCTGACTCTCGAGTAAACGAGAGCTTGGACTTGACCCACAACCTGG
CCCAAGCCTGCCACTGCGTCGCTCAGGGAAAGACGGTGCTGTGGTAGTGG
CGAAGACAGGCATGGGAAGCTCTGCGGCACTCATCTCGTCCTTGGTGGGC
GCTCTATTGTCCTTTTTCGGGAAAGCGCGTTTCCCGTGCGATAGCAGCTC
GTCGGATGCTGCTCTAAACGTCGACGAAGGGTCTGACGGACCTGACTCTC
GAGTAAACGAGAGCTTGGACTTGACCCACAACCTGGCCCAAGCCTGCCAC
TGCGTCGCTCAGGGAAAGGTTGGCAGTGGCTTCGATGTCTCTGCGGCGGT
ATATGGTACCCACATATATACACGGTTCTCGCCAAGCGAAATTGCCGACA
CCCTCTCCGCTGGCGATAAATCGGCGGCTAGATACTCGGCCCCTTCATCT
TCCGTAGATGGACATGCGAATGGTTGTGATCCAGCTTCTGCCATTCCCAC
CCCACTCCAGCGTATTTCTAAGTGTGTTGAGGCCCAAGGAGGTTGGGACG
CAGAGAGGGGCCAGTTGCGACTTCCGTTCTGCTTCCGACTGTTGATGGGG
GATGTTTGCGGGGGCTCGTCCACCCCATCGATGGTCAAAAAGGTTGGCAG
TGGCTTCGATGTCTCTGCGGCGGTATATGGTACCCACATATATACACGGT
TCTCGCCAAGCGAAATTGCCGACACCCTCTCCGCTGGCGATAAATCGGCG
GCTAGATACTCGGCCCCTTCATCTTCCGTAGATGGACATGCGAATGGTTG
TGATCCAGCTTCTGCCATTCCCACCCCACTCCAGCGTATTTCTAAGTGTG
TTGAGGCCCAAGGAGGTTGGGACGCAGAGAGGGGCCAGTTGCGACTTCCG
TTCTGCTTCCGACTGTTGATGGGGGATGTTTGCGGGGGCTCGTCCACCCC
ATCGATGGTCAAAAAGGTGCAGGCGTGGCGGGCAGACCCGTCAACCGCCA
CTCTGGCCAAGGAGATTTGGTCAGCGCTAGGTTCCACCAACTCCACGATC
GCGGGTCTGCTCAACAGTGTAACGACCACTTCATTGGCATCTCGAAAACA
TCCCACCGGAGGTGACAGTAGCTTCGAGGCGGTAACAAAGGTGCAGGCGT
GGCGGGCAGACCCGTCAACCGCCACTCTGGCCAAGGAGATTTGGTCAGCG
CTAGGTTCCACCAACTCCACGATCGCGGGTCTGCTCAACAGTGTAACGAC
CACTTCATTGGCATCTCGAAAACATCCCACCGGAGGTGACAGTAGCTTCG
AGGCGGTAACAAAGCACCTATCCGCCCTGCCGTCGGACAAATGGGCTGAA
TTCATGCAGGAAGATAGGGACCTGAGGATGCAATCGGTGGAGCAGCTGAT
CCAGCTCAAGGCAGCATTCGCCAAGGCCCGTCGACTCTTGCGCGACATGG
GAGAGCACCTATCCGCCCTGCCGTCGGACAAATGGGCTGAATTCATGCAG
GAAGATAGGGACCTGAGGATGCAATCGGTGGAGCAGCTGATCCAGCTCAA
GGCAGCATTCGCCAAGGCCCGTCGACTCTTGCGCGACATGGGAGAGCATG
CTGGGGTGCCCATCGAACCTCCTGTCCAGACAAAATTGGTGGACGCGACA
TGCGCCCTGCCTGGGGTGCTATGTGCTGGAGTCCCTGGAGCAGGTGGCGT
CGACGCGGTTTTCGCGATTACGGTACACCCAGAGTCGGAGAGCGGCGTAC
GAGAACTTTGGGCTAGTTGGCGATTTGGAGGCGAAGATATTGTCCAAGCA
GATAATATGGATGCAGATAGGCAGGGCGAGGATGTTGGGGGAGGATTTGT
GTGTCCCCTATTGCTTTCAGCTTCGGAGAGCGGCCTTGAAGGTGGCACGT
TGTACACGCGAAAGCTATCTTGGGAGTAGCATGCTGGGGTGCCCATCGAA
CCTCCTGTCCAGACAAAATTGGTGGACGCGACATGCGCCCTGCCTGGGGT
GCTATGTGCTGGAGTCCCTGGAGCAGGTGGCGTCGACGCGGTTTTCGCGA
TTACGGTACACCCAGAGTCGGAGAGCGGCGTACGAGAACTTTGGGCTAGT
TGGCGATTTGGAGGCGAAGATATTGTCCAAGCAGATAATATGGATGCAGA
TAGGCAGGGCGAGGATGTTGGGGGAGGATTTGTGTGTCCCCTATTGCTTT
CAGCTTCGGAGAGCGGCCTTGAAGGTGGCACGTTGTACACGCGAAAGCTA
TCTTGGGAGTAG
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