prot_H-paniculata_contig9458.17203.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9458.17203.1
Unique Nameprot_H-paniculata_contig9458.17203.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: D7FIP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIP1_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.290e-44
Identity = 73/81 (90.12%), Postives = 76/81 (93.83%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHKQ 81
            M+SPAFSDFLF+KLE GGSRLTFVVGGAEGLPPGLK KPP GG KLSLSSMTFTHLWAR LLAEQIYRASEIRRGSKYHK+
Sbjct:  109 MNSPAFSDFLFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 189          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A6H5KEB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB2_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.730e-43
Identity = 72/81 (88.89%), Postives = 76/81 (93.83%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHKQ 81
            M+SPAFSDF+F+KLE GGSRLTFVVGGAEGLPPGLK KPP GG KLSLSSMTFTHLWAR LLAEQIYRASEIRRGSKYHK+
Sbjct:  130 MNSPAFSDFVFSKLEEGGSRLTFVVGGAEGLPPGLKQKPPHGGAKLSLSSMTFTHLWARALLAEQIYRASEIRRGSKYHKE 210          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A7S2R9V3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9V3_9STRA)

HSP 1 Score: 101 bits (251), Expect = 8.770e-26
Identity = 53/78 (67.95%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    3 SPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            S  FSD LF+KLE GGSRL FV+GGAEGLPP LK    + G  +SLS +TFTH  AR+LLAEQ+YRA+EIRRGS YHK
Sbjct:   60 SERFSDMLFSKLEDGGSRLMFVIGGAEGLPPELK----RSGNLMSLSKLTFTHQMARMLLAEQVYRAAEIRRGSGYHK 133          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A835ZC53_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC53_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.010e-24
Identity = 48/80 (60.00%), Postives = 63/80 (78.75%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            +DS +FS++L+ KLE GGSRL FV+GGAEGLP  +K++  +   K+SLS M  TH WA  LL+EQIYRA+EIR+G+KYHK
Sbjct:   94 LDSTSFSEYLYKKLEIGGSRLAFVIGGAEGLPASMKAE--KSYDKMSLSKMVLTHTWAWALLSEQIYRATEIRKGTKYHK 171          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A0M0K3N9_9EUKA (Ribosomal RNA large subunit methyltransferase h n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K3N9_9EUKA)

HSP 1 Score: 94.0 bits (232), Expect = 2.970e-22
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    3 SPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            S  F+   F  LEAGGSR+TF +GGA+GLPP LK+ P   G  LSLS +TFTH  AR+LL EQIYRA+EIRRGS YHK
Sbjct:  117 SVEFTSRFFDALEAGGSRVTFFIGGADGLPPALKADP---GRLLSLSRLTFTHQMARLLLIEQIYRATEIRRGSGYHK 191          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A7W1YWG3_9BACT (Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1YWG3_9BACT)

HSP 1 Score: 92.0 bits (227), Expect = 4.490e-22
Identity = 49/80 (61.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            + S  FS FL  KL+ GGSRLTF++GGA+GLP  LKS P      LSLS MTFTH   R++L EQIYRA EI RGS+YHK
Sbjct:   65 LSSEEFSSFLHQKLQLGGSRLTFIIGGADGLPTTLKSSP-----LLSLSKMTFTHQITRLILVEQIYRAFEIARGSQYHK 139          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: W7TG35_9STRA (Ribosomal rna large subunit methyltransferase h n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG35_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.720e-22
Identity = 48/81 (59.26%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHKQ 81
            + S   +D L+ +LE GG+RL+ V+GGAEGLPP L++         SLS +TFTH WARVLLAEQIYRASEI+RGS YHK+
Sbjct:  137 LSSMELADILYKRLEEGGARLSLVIGGAEGLPPRLRASKELW----SLSRLTFTHQWARVLLAEQIYRASEIKRGSGYHKE 213          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A7S1TQJ2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQJ2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.900e-22
Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    3 SPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            S AFSD L+  LE GGSR+ FV+GGAEGLPP L     QG   +SL  MT TH +AR+LL+EQIYRAS+IR G+KYHK
Sbjct:   55 SEAFSDQLYKWLEEGGSRVCFVIGGAEGLPPALLE---QGFPAISLGKMTLTHQFARLLLSEQIYRASQIRLGTKYHK 129          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: A0A7S2UUR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.260e-21
Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            ++S  FS  ++  LE GGSRL FV+GGAEGLPP LK++       +SLS MTFTH  AR++LAEQIYRA+EIR+G+ YHK
Sbjct:  115 LNSKEFSQMMYKMLEDGGSRLHFVIGGAEGLPPSLKTEAKH---LISLSKMTFTHQQARLILAEQIYRATEIRKGTGYHK 191          
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Match: UPI001BC8D685 (23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH n=1 Tax=Parachlamydia sp. AcF125 TaxID=2795736 RepID=UPI001BC8D685)

HSP 1 Score: 89.7 bits (221), Expect = 3.730e-21
Identity = 50/80 (62.50%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    1 MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSSMTFTHLWARVLLAEQIYRASEIRRGSKYHK 80
            + S  FS FL  KLE GGSRLTFV+GGAEGLP  LK    Q    +SLS +TFTH  ARV+L EQIYRA EI +GS+YHK
Sbjct:   65 LSSEQFSSFLMRKLEEGGSRLTFVIGGAEGLPLFLK----QNKEAISLSLLTFTHQIARVVLIEQIYRALEIAKGSRYHK 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9458.17203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIP1_ECTSI3.290e-4490.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEB2_9PHAE1.730e-4388.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2R9V3_9STRA8.770e-2667.95Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZC53_9STRA2.010e-2460.00Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A0M0K3N9_9EUKA2.970e-2264.10Ribosomal RNA large subunit methyltransferase h n=... [more]
A0A7W1YWG3_9BACT4.490e-2261.25Ribosomal RNA large subunit methyltransferase H n=... [more]
W7TG35_9STRA6.720e-2259.26Ribosomal rna large subunit methyltransferase h n=... [more]
A0A7S1TQJ2_9STRA6.900e-2262.82Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UUR8_9STRA3.260e-2158.75Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI001BC8D6853.730e-2162.5023S rRNA (pseudouridine(1915)-N(3))-methyltransfer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 1..81
e-value: 1.0E-26
score: 95.4
IPR003742RNA methyltransferase RlmHPFAMPF02590SPOUT_MTasecoord: 1..79
e-value: 2.7E-22
score: 79.4
IPR003742RNA methyltransferase RlmHPANTHERPTHR33603FAMILY NOT NAMEDcoord: 2..80
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 1..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9458contigH-paniculata_contig9458:533..778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9458.17203.1mRNA_H-paniculata_contig9458.17203.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9458 506..778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9458.17203.1 ID=prot_H-paniculata_contig9458.17203.1|Name=mRNA_H-paniculata_contig9458.17203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
MDSPAFSDFLFTKLEAGGSRLTFVVGGAEGLPPGLKSKPPQGGTKLSLSS
MTFTHLWARVLLAEQIYRASEIRRGSKYHKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029026tRNA_m1G_MTases_N
IPR003742RlmH-like
IPR029028Alpha/beta_knot_MTases