prot_H-paniculata_contig9453.17199.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9453.17199.1
Unique Nameprot_H-paniculata_contig9453.17199.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig9453.17199.1 vs. uniprot
Match: A0A6H5JAD5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAD5_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 1.800e-109
Identity = 284/703 (40.40%), Postives = 362/703 (51.49%), Query Frame = 0
Query:    1 MGVKGDLKEARACMQGGDPAQAYSMIQTILDSGAPELKDSQVMYAVLVTSGLTALAKEDHAASEDSFRRATTVVPDAPQ------------AWKGLIDCLERAG--KLEALPDALLPAARIAEGKGNHGRARSLRLRLAEVLEGLGRESEALDVLLVHLNNPAADKAISSAEADG-----AASEKLALVLHVAVLEEAVESTTVAQKAKKRVLKESGITSVNSEKASAGNMVVASAGGDCGGRLALLTFEYGAKAQVKDH---EEGGPVARTLEDAMRALEEAACS-VGDDPAAAXXXXXSQGQGSQA-----PSTARCQQLVERFVRIFVGKAVRRAECGSNGQ-----GWQELLIACTRCRSALGTYLATADDGWTSAATLLSSTY-YHNHPMSSSQN-------------LHELATENAKKQSN--------------PWLAAESCLYLAWVAWSAGDGTTAGTLLSAAQAARLRAR--SHGSAPPRAATARSPDGLSGPGSNWRELSLECLISEQLGYPGADRDPTVAEA----KLDTAVSATEASVSLRGPPLRERDLS---GSLALARASLLITMG--RLEEARSAVNVVVASNVGVSPTRGTITGAIGEQQAETGGENEGEAGAAGSIPTPKKENIGGGLTSPRLRCQALCVASDVDLAEGLEDDAKGKLREVLSTDGGFAGALTRLGWLLLGFAG 631
            MGVKGDLK ARA MQ G+P++A+SMIQ ILDS  P+LKD+Q +YAVLVTSGL ALA +D  A+E SFRRA   +PDAPQ            AWKGLIDCLER+G  K+ ALP+ L  AA IAEGKGN  RAR LRLRL  VL+ LGR+ EAL+ +L H+++P   +A+++   DG     AA+E+L+L L                                                    R   L F+Y AKA  KD    E GG VA+ L DAM AL +A  S  G+D +           G  A     P     + LV RF R ++G+AV RAE  +         W+E+L AC R  SA+   ++  DDGW + ATLL+STY   NH   ++ N             L  +A   A+ ++               PWL +E+CL+LA +A  AGD + A   L  A  + + AR   H  +  + A A     LSGPGS+WRELSL CL+ E+LG  G D  P  A A    ++D A++A + S  LRG P  E D +   G L LARASLL+ +G  RLEEAR+AV +  A  V V+     +                    A   I  P           P L C+ALCVASDVDLA G  + AKGKLRE L  + GF  AL+RLGWLLLGF G
Sbjct:    1 MGVKGDLKAARARMQAGEPSEAFSMIQNILDSSHPDLKDAQTLYAVLVTSGLAALASQDLTAAESSFRRAADSIPDAPQPSYIFIPNPTPKAWKGLIDCLERSGAEKVAALPECLSRAAEIAEGKGNFARARGLRLRLGTVLDHLGRKEEALEAVLRHVDSP---QAMAATAGDGSGVPTAATERLSL-LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATALAFDYRAKALAKDDDSAEGGGRVAKRLSDAMEALLDAGQSPAGEDGSGLMTREGGSDVGGDAGGALTPDNVVLKPLVARFCRAYLGRAVHRAEAAAAAAVEASTRWREVLAACARVESAVR--VSGWDDGWAATATLLASTYALPNHQRGAAGNGEDDNETTAALLELRRIARGGAQDEAGGDNADGAAAASPRRPWLKSEACLHLAGLALWAGDISQADAHLKTAAESAVAARIPPHRGSSTKQAGAPWAGALSGPGSDWRELSLRCLVDERLGDGGGD--PAAAAALGLGRVDAAMAAFDESSRLRGKPDGEGDYADVLGRLGLARASLLLKLGGGRLEEARAAVEMASAGAVHVARQASAV--------------------ADDGICRP-----------PSLYCRALCVASDVDLAGGEREQAKGKLREALEAEAGFGDALSRLGWLLLGFGG 664          
BLAST of mRNA_H-paniculata_contig9453.17199.1 vs. uniprot
Match: D7G059_ECTSI (Similar to Tetratricopeptide repeat protein 37 (TPR repeat protein 37) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G059_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 4.590e-85
Identity = 252/652 (38.65%), Postives = 313/652 (48.01%), Query Frame = 0
Query:    1 MGVKGDLKEARACMQGGDPAQAYSMIQTILDSGAPELKDSQVMYAVLVTSGLTALAKEDHAASEDSFRRATTVVPDAPQAWKGLIDCLERAG--KLEALPDALLPAARIAEGKGNHGRARSLRLRLAEVLEGLGRESEALDVLLVHLNNPAADKAISSAEADGAASEKLALVLHVAVLEEAVESTTVAQKAKKRVLKESGITSVNSEKASAGNMVVASAGGDCGGRLALLTFEYGAKAQVKDHEEGGP-------VARTLEDAMRAL-EEAACSVGDDPAAAXXXXXSQGQGSQAPSTARCQQLVERFVRIFVGKAVRRAECGSNGQGWQELLIACTRCRSALGTYLATADDGWTSAATLLSSTYYHNHPMSSSQNLHELATENAKKQSNPWLAAESCLYLAWVAWSAGDGTTAGTLLSAAQAARLRAR--SHGSAPPRAATARSPDGLSGPGSNWRELSLECLISEQLGYPGADRDPTVAEA----KLDTAVSATEASVSLRGPPLRERDLS---GSLALARASLLITMG--RLEEARSAVNVVVASNVGVSPTRGTITGAIGEQQAETGGENEGEAGAAGSIPTPKKENIGGGLTSPRLRCQALCVASDVDLAEGLEDDAKGKLREVLSTDGGFAGALTRLGWLLLGFAG 631
            MGVKGDLK ARA MQ G+P++A+SMIQ ILDS  P+L D+Q +YAVLVTSGL ALA +D  A+E SFRRA   +PDAPQAWKGLIDCLER+G  K+ ALP+ L  AA IAEGKGN  RAR LRLRL  VL+ LGR+ EAL+ +L HL++P   +A+++A  DG                                   SGI++  +E                  RL+LL                         VA+ L DAM AL E  A   GDD                  +TA   +L     RI  G A  + E G +                          DG  +A+                                PWL +E+CL+LA +A  AGD   A   L  A  + + AR   H  +  + A A     LSGPGS+WRELSL CL+ E+LG  G D  P  A A    ++D A++A + S  LRGPP  E D +   G L LARASLL+ +G  RLEEARSAV +  A  V V+                     +  AGA   I  P           P L C+ALCVAS+VDLA G  + AKGKLRE L  + GF  AL+RLGWLLLGF G
Sbjct:    1 MGVKGDLKAARARMQAGEPSEAFSMIQNILDSSHPDLNDAQTLYAVLVTSGLAALASQDLTAAESSFRRAADSIPDAPQAWKGLIDCLERSGAEKVGALPECLSRAAEIAEGKGNLARARGLRLRLGTVLDHLGRKEEALEAVLRHLDSP---EAMAAAAGDG-----------------------------------SGISTAATE------------------RLSLLXXXXXXXXXXXXXXXXXXXXXXXXRVAKRLSDAMEALLERGASGNGDD---------------DNEATAALLEL----RRIARGGA--QDEAGGD------------------------KTDGAAAASP-----------------------------RRPWLKSEACLHLAGLALWAGDVYQADAFLKTAAGSAVAARIPPHRRSSTKQAGAPWAGALSGPGSDWRELSLRCLVDERLGDGGGD--PAAAAALGLGRVDAAMTAFDESFRLRGPPDGEGDYADVLGRLGLARASLLLKLGGGRLEEARSAVEMASAGAVHVA--------------------RQASAGADDGICRP-----------PSLHCRALCVASEVDLAGGEREQAKGKLREALEAEAGFGDALSRLGWLLLGFGG 489          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9453.17199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAD5_9PHAE1.800e-10940.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G059_ECTSI4.590e-8538.65Similar to Tetratricopeptide repeat protein 37 (TP... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..180
e-value: 5.5E-8
score: 34.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 45..141
NoneNo IPR availablePANTHERPTHR15704:SF7TETRATRICOPEPTIDE REPEAT PROTEIN 37coord: 3..196
IPR039226Ski3/TTC37PANTHERPTHR15704SUPERKILLER 3 PROTEIN-RELATEDcoord: 3..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9453contigH-paniculata_contig9453:4872..8035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9453.17199.1mRNA_H-paniculata_contig9453.17199.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9453 3542..8035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9453.17199.1 ID=prot_H-paniculata_contig9453.17199.1|Name=mRNA_H-paniculata_contig9453.17199.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MGVKGDLKEARACMQGGDPAQAYSMIQTILDSGAPELKDSQVMYAVLVTS
GLTALAKEDHAASEDSFRRATTVVPDAPQAWKGLIDCLERAGKLEALPDA
LLPAARIAEGKGNHGRARSLRLRLAEVLEGLGRESEALDVLLVHLNNPAA
DKAISSAEADGAASEKLALVLHVAVLEEAVESTTVAQKAKKRVLKESGIT
SVNSEKASAGNMVVASAGGDCGGRLALLTFEYGAKAQVKDHEEGGPVART
LEDAMRALEEAACSVGDDPAAAAAAASSQGQGSQAPSTARCQQLVERFVR
IFVGKAVRRAECGSNGQGWQELLIACTRCRSALGTYLATADDGWTSAATL
LSSTYYHNHPMSSSQNLHELATENAKKQSNPWLAAESCLYLAWVAWSAGD
GTTAGTLLSAAQAARLRARSHGSAPPRAATARSPDGLSGPGSNWRELSLE
CLISEQLGYPGADRDPTVAEAKLDTAVSATEASVSLRGPPLRERDLSGSL
ALARASLLITMGRLEEARSAVNVVVASNVGVSPTRGTITGAIGEQQAETG
GENEGEAGAAGSIPTPKKENIGGGLTSPRLRCQALCVASDVDLAEGLEDD
AKGKLREVLSTDGGFAGALTRLGWLLLGFAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039226Ski3/TTC37