mRNA_H-paniculata_contig9449.17198.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9449.17198.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI) HSP 1 Score: 276 bits (705), Expect = 8.170e-75 Identity = 224/680 (32.94%), Postives = 316/680 (46.47%), Query Frame = 3
Query: 3 RTAALLALIALSVAGSGTIMPALPQPFRTLAPGDTAGSNAGTLREWAVFVHEGLMLESLADHFEDFGSAAACMLVVTLVSLLVYPLRAMMSSCTTSSYSSAGKIQKPSILWTLCCGAVAVGLPAMVVWAVAIWAAGTSHWGLASGFCVGLHCCALTLKSWAFVQAIGFNDCTTDGSDGXXXXXXEVGSDVATVVYREGRYLSGVQVEANGNEEAMTNREDDTAHGNNNVTSLYKDTVTTAP--DDPTLRKNNDVDSKKGGACARASAHAGKTIAAVASASADSPPLPSTSPLRPATTNQLSFQEFLFFQLLAPSLVCEPGWLKRPSRRAPRPCAALTEFLHAVLTYLALHAYSVALFAPCFRILSTAWSTTTTDASGSGVGDGHQHMWALNVEGLEALRGSGGAGWLVAAVAGDWDGTVNTTTVVGGMAVQAGEVLMAPL------SEGAWAAVVAVAAMCVMYSFGPLNHYLLFYAFFHCILLGSAELWGYPDRDFYGPWWLALDHVKDYFRTWSAPVYRWLSVCIQRPLLKAA---AAAXXXXXXXXXNDK-------------------SSTSADRNGKA---------PSWAVNASVVLVFFVSGLIHEAAGYLGMRRTIFPMNTFFLLLSASMFPTWEIIFPLKDEASSLTPPPSSRPIAPRNGARAGVTATNGD 1925
RT+ALL ++A+S+A SG D +G ++ + EW V++ +G+ L L HF SA CM++ T+ S LVYP+ C+ ++ + + + T +A +P+M VW WG+ASG CVGL C ALTLKS +FVQ + +A E +GV A+ + A A G ++ + + P + P+ N D CA A+ PA L+F+EF FF +LAPSLVC P +LK +RR PR AA +EFLHA LTY+A+H ALFAP R+L+ A SG G + WA LR + G+GW + D ++ + GG + G V P G VA+AA ++ F P+ H+L+FYAFFH + LG AEL+GYPDR+ YGPWWL +D V+DYFR WSAPV+RWLS +QRP+++ A DK TS+ GKA W + ASVV F VSG++HEA G++ MRRT++P +TFFL ++ASM P W+ +FP+ + S+ P +RP R A + A GD
Sbjct: 37 RTSALLVVVAMSIAASGA---------------DGSGGSSSSA-EWGVYLAKGMHLALLQKHFGGMVSALGCMVMGTVTSFLVYPIY---QRCSPAAIQNPRALPCRRVSSTTA-KTIAAAVPSMAVWXXXXXXXXXXXWGIASGLCVGLQCAALTLKSVSFVQKA---------------RPVAAEAAIAVAAAHEDLDAAGVAENADEGDRAAA------ASGKLAISPARRSVLQRDPRSNSPSSTANGD------DGCAHAA--------------------------NPA----LTFREFAFFLVLAPSLVCRPQYLKSGARRPPRVAAAASEFLHAGLTYVAVHVACSALFAPALRVLAEALH------SGGVAGWADEEDWA-------ELRRTDGSGWWLH----DSSRSIGSLFASGGGSCVGGGVGCVPGWTFADDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIEVGQREALRHRRRRVAREEDKPPATNGNSGGSNGVHDYRPKGTSSTTGGKARHGADAGIVTRWWL-ASVVCSFLVSGVVHEAVGFVAMRRTVWPFSTFFLAVTASMAPFWDTLFPVVADTST----PGTRPTGRR--AFTSIAAAGGD 615
BLAST of mRNA_H-paniculata_contig9449.17198.1 vs. uniprot
Match: A0A6H5KXI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI3_9PHAE) HSP 1 Score: 213 bits (542), Expect = 2.980e-55 Identity = 186/566 (32.86%), Postives = 253/566 (44.70%), Query Frame = 3
Query: 3 RTAALLALIALSVAGSGTIMPALPQPFRTLAPGDTAGSNAGTLREWAVFVHEGLMLESLADHFEDFGSAAACMLVVTLVSLLVYPLRAMMSSCTTSSYSSAGKIQKPSI-----LWTLCCGAVAVGLPAMVVWAVAIWAAGTSHWGLASGFCVGLHCCALTLKSWAFVQAIGFNDCTTDGSDGXXXXXXEVGSDVATVVYREGRYLSGVQVEANGNEEAMTNREDDTAHGNNNVTSLYKDTVTTAP--DDPTLRKNNDVDSKKGGACARASAHAGKTIAAVASASADSPPLPSTSPLRPATTNQLSFQEFLFFQLLAPSLVCEPGWLKRPSRRAPRPCAALTEFLHAVLTYLALHAYSVALFAPCFRILSTAWSTTTTDASGSGVGDGHQHMWALNVEGLEALRGSGGAGWLVAAVAGDWDGTVNTTTVVGGMAVQAGEVLMAP---LSE---GAWAAVVAVAAMCVMYSFGPLNHYLLFYAFFHCILLGSAELWGYPDRDFYG----------------------------PWWLALDHVKDYFRTWSAPVYRWLSVCIQRPLLK 1577
RT+ALL ++A+S+A SG GD GS EW V++ +G+ L L HFE SA CM + T+ S LVYP+ C+ ++ IQ P + + +A +P+M VWA WG+ASG CVGL C ALTLKS +FVQ V ++ A V L +V AN ++ A G ++ + + P + P+ N D GGA A PA L+F+EF FF LAPSLVC+P +L +RR PR AA +EFLHA LTY+A+H ALFAP R+L+ SG G + WA LR + G+GW + D G++ + GG G V P S+ G VA+AA ++ F P+ H+L+FYAFFH + LG AEL+GYPDR+ YG PWWL +D V+DYFR WSAPV+RWLS +QRP+++
Sbjct: 37 RTSALLVVVAMSIAASG---------------GD--GSGRSNSAEWGVYLAKGMHLTLLQKHFEGIVSALGCMAMGTVTSFLVYPIY---QRCSPAA------IQNPRAPPCRRVSSATAKTIAAAVPSMAVWAXXXXXXXXXXWGVASGLCVGLQCAALTLKSVSFVQKA-----------------RPVAAEAAIAVVAAHEDLDAARVAANADDGDRAAA----ASGQLAISPARRSVLQGDPRSNPPSPTANGD----DGGARAA----------------------------NPA----LTFREFAFFLALAPSLVCQPQYLASGARRPPRVAAAASEFLHAGLTYIAVHVACSALFAPALRVLAGVLH------SGGVAGWADEEDWA-------ELRRTDGSGWWLY----DSSGSLGSLFASGGGGCVHGGVGCGPGWTFSDDGTGHPGLTVAIAACLGVFVFSPMMHFLMFYAFFHSVCLGCAELYGYPDRNTYGELSFSLVGDRFTPSAGLEGQALRHDSAGPWWLVVDDVRDYFRLWSAPVHRWLSESVQRPMIE 502
BLAST of mRNA_H-paniculata_contig9449.17198.1 vs. uniprot
Match: D7FQW2_ECTSI (Sterol or diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW2_ECTSI) HSP 1 Score: 206 bits (523), Expect = 4.310e-51 Identity = 237/836 (28.35%), Postives = 331/836 (39.59%), Query Frame = 3
Query: 3 RTAALLALIALSVAGSGTIMPALPQPFRTLAPGDTAGSNAGTLREWAVFVHEGLMLESLADHFEDFGSAAACMLVVTLVSLLVYPLRAMMSSCTTS-SYSSAGKIQKPSILWTLCCGAVAVGLPAMVVWAVAIWAAGTSHWGLASGFCVGLHCCALTLKSWAFVQAIGFNDCTTDGSDGXXXXXXEVGSDVATVVYREGRYLSGVQVEANGNEEAMTNREDDTAHGNNNVTSLYKDTVTTAPDDPTLRKNNDV--DSKKGGACARASAHAGKTIAAVASASADSPPLPSTSPLRPATTNQLSFQEFLFFQLLAPSLVCEPGWLKRPSRRAPRPCAALTEFLHAVLTYLALHAYSVALFAPCFRILSTAWSTT--------------TTDASGSGVGDGHQHM-----------------WALNVEGLEALRGSGGAGWLVAAVAGDWDGTVNTTTVVGGMAVQAGEVLMAPLSEGA----WAAVVAVAAMCVMYSFGPLNHYLLFYAFFHCILLGSAELWGYPDRDFYGPWWLALDHVKDYFRTWSAPVYRWLSVCIQRPLLKAAAAAXXXXXXXXXNDKSSTSADRNGKAP------------------------------SWAVNASVVLVFFVSGLIHEAAGYLGMRRTIFPMNTFFLLLSASMFPTWEIIFPLKD---EASSL-------------TPPPSSRPIAPRNGA----RAGVTATNGDVRVLSPGSDGDGGSVGDESLTKSLAIEESSAGEKEERENVSGRSLRRREYKGDVGLD---------------RGLGVVIFCFFSSTAMEALYDFLAWQWWRKAFLTD 2201
RT ALLAL A S SG P+ F T A + + EW F+ +GL L+ LA HFE G A ACM V+ LV+ L YPL +++ ++ AGK Q S + G + ++ + L S V + TL W N D VG A + + + Q N T +E A G AP R DV D G PPL L+F EFLFF L APSLVCEP +L++ +RRAP P A +EF HAVL ++ALHA A FAP R+++ A +T +D G G GDG WA EG+ GSGG W + + DG T A+ E L + GA W + A +A+ M F P+ H++ FY F+HC+ LG AELWGYPDR+FYGPWWL + +R WS PV+RW+S CI RP++ AA + + K+ +W ++ F S L+HEA ++ MRRT +P++TF L+LS + W+ ++P++ E++++ T PP+ + + P + A + G TAT DV S + G++ D S KS + + + E+ S G G+D RG G V F +S M DFL WQWWR L +
Sbjct: 41 RTVALLALAACSAKFSGAAAPSAD--FETPAA-------STVVDEWTAFLTKGLALDLLARHFEGIGKALACMFVMALVATLAYPLHLLITRPPSAVPAGGAGKGQAESERRS-------PGSQRRQLSSLXXXXXXSPFLPLLSAMVVA----STTLPIWTLAVWGSVN------LDWGLASGLSVGLLSACLSLKSASFA---QSWCCFNAPVTTAKEAAEATG--------------APSGGETRSREDVCGDGDLAG-----------------------PPL-------------LTFGEFLFFILAAPSLVCEPEFLRKHARRAPCPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVVAAAVFSTPSPSLVGESAQAALASDFRGCGSGDGEHTCGGSPFNGATIGWVDCVGWA-GAEGIHTAGGSGG--WFFSLLL---DGGGPETA-----AISYFESLFCGGAGGAGLAGWWGIAAASAL-AMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPVVGHKNAAFSQPGRSGGGVRRGLAGTLCRKSEEXXXXXXXXXXXXXXXXXXXXXXXQTQRRWTWRRLLALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVRSIISESAAVSGASGEDSGDRHGTGPPAEQAVLPSSSAATRSQPGATATAADVSCGSTVVETSDGTLEDHS-EKSYVVVDQARDLGEQHAITSKNGSDSCGTGGGGGVDGAGRVSNTKKAGREWRGWGAVAFFEGASLVMGLAVDFLMWQWWRHTLLYE 784
BLAST of mRNA_H-paniculata_contig9449.17198.1 vs. uniprot
Match: A0A6H5J9L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9L7_9PHAE) HSP 1 Score: 206 bits (523), Expect = 4.750e-51 Identity = 196/700 (28.00%), Postives = 281/700 (40.14%), Query Frame = 3
Query: 3 RTAALLALIALSVAGSGTIMPALPQPFRTLAPGDTAGSNAGTLREWAVFVHEGLMLESLADHFEDFGSAAACMLVVTLVSLLVYPLRAMMSS-------------------CTTSSYSSAGKIQKPSILWTLCCGAVAVGLPAMVVWAVAIWAAGTSHWGLASGFCVGLHCCALTLKSWAFVQAIGFNDCTTDGSDGXXXXXXEVGSDVATVVYREGRYLSGVQVEANGNEEAMTNREDDTAHGNNNVTSLYKDTVTTAPDDPTLRKNNDVDSKKGGACARASAHAGKTIAAVASASADSPPLPSTSPLRPATTNQLSFQEFLFFQLLAPSLVCEPGWLKRPSRRAPRPCAALTEFLHAVLTYLALHAYSVALFAPCFRILSTAWSTTTTDA---------------SGSGVGDGHQHMWALNVEGLEALRG-------SGGAGWLVAAVAGDW------DGTVNTTTVVGGMAVQAGEVLMAPLSEGA----WAAVVAVAAMCVMYSFGPLNHYLLFYAFFHCILLGSAELWGYPDRDFYGPWWLALDHVKDYFRTWSAPVYRWLSVCIQRPLLKAAAAAXXXXXXXXXNDKSSTSADRNGKAP---------------------------------------SWAVNASVVLVFFVSGLIHEAAGYLGMRRTIFPMNTFFLLLSASMFPTWEIIFPLK 1832
RT ALLAL A S SG P+ F T A + + +W F+ +GL L+ LA HFE G A ACM V+ LV++L YPL +++ C+ S S + A+ V + +WA+A+W + WGLASG VGL L+LK+ +F Q+ + V T +E +G E + R+DD A PPL L+ EFLFF L APSLVCE +L+ +RRAPRP A +EF HAVL ++ALHA A FAP R+L++A + + + GS G G + + A+ G +G G A +G W DG + T V E L + GA W A+ A +A+ M F P+ H++ FY F+HC+ LG AELWGYPDR+FYGPWWL + +R WS PV+RW+S CI RP++ +AA + A + + P +W ++ F S L+HEA ++ MRRT +P++TF L+LS + W+ ++P++
Sbjct: 41 RTVALLALAACSAKFSGAAAPSAR--FETSAA-------STVVDDWTAFLTKGLALDLLARHFEGIGKALACMFVMALVAILAYPLHLLITRSPSAVPAGGAGTGQAESERCSPGSQRRQLSSLSSSSPFLPLLSALVVASTTLPIWALAVWGSVNLDWGLASGLSVGLLSACLSLKNASFAQS-----------------WCRFNAPVTTA--KEAAETAGAPGGGARPREEVC-RDDDRA---------------------------------------------------------GPPL-------------LTLGEFLFFILAAPSLVCEQEFLRERARRAPRPGRAFSEFSHAVLVFVALHAACSAFFAPVMRVLASAVFSPPSPSLAAESAHEALACDFRGGSSGGSGGGEYTCGGLPSIGAMIGWVDCVGWAGAEGIHTAGRSGGWFFSLLLDGGGSETAVASYF-----ESLFCGGAGGAGLAGWWAIAAASAL-AMLVFSPMVHFMAFYGFWHCVCLGCAELWGYPDRNFYGPWWLLAEEPDTMYRLWSTPVHRWVSSCIYRPIVGHKSAAIPQPGCSSGGVRRGL-AGTSCREPEEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRWTWRRLMALTSAFLFSSLVHEAVTFVAMRRTCWPVSTFSLVLSIFVISGWDAMYPVR 634
BLAST of mRNA_H-paniculata_contig9449.17198.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI) HSP 1 Score: 197 bits (500), Expect = 6.840e-50 Identity = 122/349 (34.96%), Postives = 177/349 (50.72%), Query Frame = 3
Query: 879 ATTNQLSFQEFLFFQLLAPSLVCEPGWLKRPSRRAPRPCAALTEFLHAVLTYLALHAYSVALFAPCFRILSTAWSTTTTDASGSGVGDGHQHMWALNVEGLEALRGSGGAGWLVAAVAGDWDGTVNTTTVVGGMAVQAGEVLMAPLSEGAWAAVVAVAAMCVMYSFGPLNHYLLFYAFFHCILLGSAELWGYPDRDFYGPWWLALDHVKDYFRTWSAPVYRWLSVCIQRPLLKAAAAAXXXXXXXXXN---DKSSTSADRNGKAPSWAVNASVVLVFFVSGLIHEAAGYLGMRRTIFPMNTFFLLLSASMFPTWEIIFPLKD----EASSLTPPPSSRPIAPRNGARAG 1904
A L+F E+LFF L+PSLVCE +K +RR RP A +EF HAVLT+L H ++ AP R+ +A S + + +G WA L +GGAGW W T + + GG +G L ++ G + + +++ H+++FYAF+HCI LG AELWG+PDR+ YG WWL D +D+ R WS PV+RWLS C+ P+L+ + + + S+ +A+ G W +V+ F VSG+ HEA Y+ MR T +P NTF L + + W+I+FPL D S PP + ++PRN AG
Sbjct: 174 AGPRSLTFGEYLFFLFLSPSLVCEVRLMKVSARRRSRPLRAASEFFHAVLTFLCAHCVVGSILAPSLRLFFSAVSPGWVEGAAAG--------WA-------ELEAAGGAGWP------SW--TAGSALLAGGDKEDSGTRLGQLVALGCF--------LWMLFVVSSALHFMVFYAFWHCICLGMAELWGFPDRNLYGCWWLLFDEPRDFLRMWSTPVHRWLSTCVHWPMLELCSTSDEGVDGTKSPPSAELSTATAEVAGDPSKWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFPLPDLKPSSESEGGSPPQTATLSPRNEGGAG 491 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9449.17198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9449.17198.1 >prot_H-paniculata_contig9449.17198.1 ID=prot_H-paniculata_contig9449.17198.1|Name=mRNA_H-paniculata_contig9449.17198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=716bp MPALPQPFRTLAPGDTAGSNAGTLREWAVFVHEGLMLESLADHFEDFGSAback to top mRNA from alignment at H-paniculata_contig9449:883..9225+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9449.17198.1 ID=mRNA_H-paniculata_contig9449.17198.1|Name=mRNA_H-paniculata_contig9449.17198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8343bp|location=Sequence derived from alignment at H-paniculata_contig9449:883..9225+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9449:883..9225+ >mRNA_H-paniculata_contig9449.17198.1 ID=mRNA_H-paniculata_contig9449.17198.1|Name=mRNA_H-paniculata_contig9449.17198.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4296bp|location=Sequence derived from alignment at H-paniculata_contig9449:883..9225+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |