prot_H-paniculata_contig9431.17186.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9431.17186.1
Unique Nameprot_H-paniculata_contig9431.17186.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
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BLAST of mRNA_H-paniculata_contig9431.17186.1 vs. uniprot
Match: D7G5P0_ECTSI (SHSP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P0_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 1.720e-33
Identity = 87/202 (43.07%), Postives = 122/202 (60.40%), Query Frame = 0 
Query:   53 VDLRPYRPFHSPRRHPTGGRRPY-TTASPIVDMFQEVVGDIKRVAQELAESPHNSPRVPPHELVESSTSVTLYVDLPGCKKQDVDAQISEDAGSNTLKITAIRKKSYYGSESSAAAKQSEXQPGE------------------QTATEENPSSSREKEAALSPTHKEEAFELSFRIGEGIDVSGIRGSMEDGVLKLVIPKVA 235
            VD   +RPF    RH     RP+ ++A P++D+FQ+V+G+IK+VA EL++ P    R PP+E++E+  + TL VDLPGCKK+DVDAQ+SED+G+ TL ITA+RKK       + +        G                     A ++ P      E +LS +  EE+F+LSFR+GE IDVS IRG +EDGVL LV+PK+A
Sbjct:   52 VDTGAFRPF----RHVQPRGRPHVSSAGPLMDVFQDVMGEIKKVACELSD-PTTEARSPPYEVLETPDAATLIVDLPGCKKEDVDAQVSEDSGTKTLTITAVRKKPRQADGDARSPSSPPDTSGSXXXXXXXXXXXXXXXXAPHEAAKDTP------EPSLS-SFSEESFKLSFRVGEDIDVSVIRGGLEDGVLTLVLPKLA 241
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9431.17186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5P0_ECTSI1.720e-3343.07SHSP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 73..247
e-value: 1.2E-19
score: 72.5
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 104..239
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 182..247
e-value: 2.6E-8
score: 34.0
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 103..248
score: 16.481
NoneNo IPR availablePANTHERPTHR43670FAMILY NOT NAMEDcoord: 92..248
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..281
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9431contigH-paniculata_contig9431:4903..8001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9431.17186.1mRNA_H-paniculata_contig9431.17186.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9431 4694..8812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9431.17186.1 ID=prot_H-paniculata_contig9431.17186.1|Name=mRNA_H-paniculata_contig9431.17186.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
MVYPSMYLAAMTMLLSASYWPEAESHIVYHVPRGDGGLYNQMWPTAFLHP
RDVDLRPYRPFHSPRRHPTGGRRPYTTASPIVDMFQEVVGDIKRVAQELA
ESPHNSPRVPPHELVESSTSVTLYVDLPGCKKQDVDAQISEDAGSNTLKI
TAIRKKSYYGSESSAAAKQSEEQPGEQTATEENPSSSREKEAALSPTHKE
EAFELSFRIGEGIDVSGIRGSMEDGVLKLVIPKVAPQPPAEPIDIPIDPP
SGNQSFDEGEEDGTGGGMSSGASDNTHISLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom