mRNA_H-paniculata_contig9424.17181.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A836CH70_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH70_9STRA) HSP 1 Score: 619 bits (1597), Expect = 5.370e-214 Identity = 321/359 (89.42%), Postives = 338/359 (94.15%), Query Frame = 1 Query: 10 RAVRAPGGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
R+ R+ GGSDSRFFTTTKKGETHELR EL +PNRDKKKDAVKKVIANMTVGKDV+MLFTDV+NCIQTENIELKKLVYLYLINYAKTQP+LTLLAVNTFVKDA DPNPLIRALAVRTMGCIRVEKITEYLCEPLR+ALRD+DPYVRKTAAVCVAKLYDINA LVEDQGFLQVLRDL+CDPNPTVVANAVAALSEI DT G+DVM+I T+ LQKLLAALNECTEWGQVFILDSLAKY PVDG EAEGIIERVTPRLQHANSAVVMSAVKV+LSYLD +TN DT R F+RKLAPPLVTLLNSEPE QYVALRNINLIVQKR ILE EIKVFFCKYNDPIYVKMEKLE IIRLV+DRNI+QV
Sbjct: 5 RSARS-GGSDSRFFTTTKKGETHELRLELQSPNRDKKKDAVKKVIANMTVGKDVSMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDAKDPNPLIRALAVRTMGCIRVEKITEYLCEPLRRALRDDDPYVRKTAAVCVAKLYDINAGLVEDQGFLQVLRDLVCDPNPTVVANAVAALSEITDTGGKDVMQITTATLQKLLAALNECTEWGQVFILDSLAKYDPVDGVEAEGIIERVTPRLQHANSAVVMSAVKVILSYLDLITNKDTERVFSRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPKILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVSDRNIEQV 362
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A6H5J742_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J742_9PHAE) HSP 1 Score: 583 bits (1503), Expect = 3.110e-200 Identity = 297/312 (95.19%), Postives = 307/312 (98.40%), Query Frame = 1 Query: 151 MTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
MTVGKDVAMLFTDV+NCIQTENIELKKLVYLYLINYAKTQP+LTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRD+DPYVRKTAAVCVAKLYDINA+LVEDQGFLQ+LRDLICDPNPTVVANAVAALSEIGDT GRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKY+P DGREAEGIIERVTPRLQHANSAVVMSAVKVVL+YLDSV + DT+RSF+RKLAPPLVTLLNSEPETQYVALRNINLIVQKR GILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV
Sbjct: 1 MTVGKDVAMLFTDVINCIQTENIELKKLVYLYLINYAKTQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDDDPYVRKTAAVCVAKLYDINADLVEDQGFLQILRDLICDPNPTVVANAVAALSEIGDTSGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVVLTYLDSVNSVDTSRSFSRKLAPPLVTLLNSEPETQYVALRNINLIVQKRPGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 312
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A7S2H873_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H873_9STRA) HSP 1 Score: 558 bits (1437), Expect = 1.060e-196 Identity = 289/357 (80.95%), Postives = 321/357 (89.92%), Query Frame = 1 Query: 28 GGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLD----SVTNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
GGSDSRFFTT KKGE HELR EL++ +R K DAVKKVIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QP+LTLLAVNTFVKDANDPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRDEDPYVRKTAAVCVAKLYDI LV+++GFL+VL DLI D NP+VVAN VAALSEI +T GRDVM+I +VLQKLLAALNECTEWGQVFILDSLAKY+P D REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ S NAD R+ TRKLAPPLVTLLNSEPE QYVALRNINLIVQKR ILE EI+VFFCKYNDPIYVKMEKLE II+LV+++NID+V
Sbjct: 12 GGSDSRFFTTQKKGEMHELRMELHSTDRTAKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGSSGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDKV 368
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A6U3VDL9_9STRA (AP complex subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3VDL9_9STRA) HSP 1 Score: 559 bits (1440), Expect = 2.350e-193 Identity = 289/355 (81.41%), Postives = 321/355 (90.42%), Query Frame = 1 Query: 28 GGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
GGSDSRFFTT KKGE HELR EL++ +R K DAVKKVIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QP+LTLLAVNTFVKDANDPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRDEDPYVRKTAAVCVAKLYDI LV+++GFL+VL DLI D NP+VVAN VAALSEI +T GRDVM+I +VLQKLLAALNECTEWGQVFILDSLAKY+P D REAEGIIERVTPRLQHANSAVVMSAVKV+L+Y++ + NAD R+ TRKLAPPLVTLLNSEPE QYVALRNINLIVQKR ILE EI+VFFCKYNDPIYVKMEKLE II+LV++RNID+V
Sbjct: 11 GGSDSRFFTTQKKGEMHELRMELHSTDRTAKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPGLVQERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGRDVMKISAAVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILAYMEVMGGANADAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILEDEIRVFFCKYNDPIYVKMEKLEIIIKLVSERNIDKV 365
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A7S2WFD7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFD7_9STRA) HSP 1 Score: 565 bits (1457), Expect = 5.950e-193 Identity = 287/362 (79.28%), Postives = 323/362 (89.23%), Query Frame = 1 Query: 1 MAGRAVRAPGGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
+ G + GG D RFFTTTKKGE HELR E+N+PNR+KK DAVKKVIANMTVGKDV+ LFTDVVNCIQT NIELKKLVYLYLINYAKTQP+ LLAVNTFVKDANDPNPLIRALAVRTMGCIRVE+ITEYLCEPL++ L D+DPYVRKTAA+CVAKL+DI ++VE++GFL++LRD + D NPTVVANA+AAL+EI + GRDVM + TSVLQKLLAALNECTEWGQVFILD+LAKY+P +G+EAEGIIERVTPRLQHANSAVVMSAVK+VLSY+D +T+ DT R +RKLAPPLVTLLNSE E Q+VALRNINLIVQKR ILE EIKVFFCKYNDPIYVKMEKLE IIRLVN+RNI+QV
Sbjct: 3 LPGSRKKDAGGGDGRFFTTTKKGEVHELRMEINSPNREKKMDAVKKVIANMTVGKDVSSLFTDVVNCIQTNNIELKKLVYLYLINYAKTQPETALLAVNTFVKDANDPNPLIRALAVRTMGCIRVERITEYLCEPLQRCLSDDDPYVRKTAAICVAKLHDIAPDMVEERGFLEMLRDRVGDSNPTVVANAIAALNEIQEASGRDVMMMTTSVLQKLLAALNECTEWGQVFILDALAKYTPANGQEAEGIIERVTPRLQHANSAVVMSAVKIVLSYMDLITSEDTVRQLSRKLAPPLVTLLNSEAEIQFVALRNINLIVQKRPQILEHEIKVFFCKYNDPIYVKMEKLEIIIRLVNERNIEQV 364
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A7S1VQ66_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VQ66_9STRA) HSP 1 Score: 561 bits (1445), Expect = 1.360e-191 Identity = 287/353 (81.30%), Postives = 320/353 (90.65%), Query Frame = 1 Query: 28 GGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
GGSDSRFFTT KGE HELR EL++ +R K DAVKKVIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QP+LTLLAVNTFVKDA+DPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRDEDPYVRKTAAVCVAKLYDI +LV+++GFL VL DLI D NP+VVAN VAALSEI +T GRDVM+I VLQKLLAALNECTEWGQVFILDSLAKY+P DGREAEGIIERVTPRLQHAN+AVVMSAVKV+L+Y+D++ N+D R+ TRKLAPPLVTLLNSEPE QYVALRNINLIVQKR ILE+EIKVFFCKYNDPIYVKMEKLE II+L ++NIDQV
Sbjct: 11 GGSDSRFFTTQTKGEMHELRLELHSTDRTTKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDASDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDIAPDLVQERGFLDVLHDLISDSNPSVVANGVAALSEISETSGRDVMKISAGVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANAAVVMSAVKVILNYMDALQNSDAIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPNILENEIKVFFCKYNDPIYVKMEKLEIIIKLCAEKNIDQV 363
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A7S1FVF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FVF1_9STRA) HSP 1 Score: 559 bits (1440), Expect = 5.420e-191 Identity = 286/350 (81.71%), Postives = 319/350 (91.14%), Query Frame = 1 Query: 37 DSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSVTNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
DSR+FTTTKKGE HEL+ EL + +R K DAVKKVIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QP+LTLLAVNTFVKDANDPNPLIRALAVRTMGCIRV++ITEYLCEPL +ALRDEDPYVRKTAAVCVAKLYD+ LVE++GFL+ L DLI D NP+VVAN+VAALSE+ +T GRDVM + +SVLQKLLAALNECTEWGQVFILDSLAKY+P DG+EAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ V N DT R+ TRKLAPPLVTLLNSE E QYVALRNINLIVQKR ILE+EIKVFFCKYNDPIYVKMEKLE II+LV++RNIDQV
Sbjct: 1 DSRYFTTTKKGEMHELQLELQSNDRTTKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDEDPYVRKTAAVCVAKLYDVAPNLVEERGFLETLHDLISDSNPSVVANSVAALSEVAETSGRDVMRVSSSVLQKLLAALNECTEWGQVFILDSLAKYAPRDGQEAEGIIERVTPRLQHANSAVVMSAVKVILSYMELVANQDTIRNLTRKLAPPLVTLLNSEAEIQYVALRNINLIVQKRPHILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSERNIDQV 350
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A7S3PZD9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZD9_9STRA) HSP 1 Score: 558 bits (1438), Expect = 3.420e-190 Identity = 287/354 (81.07%), Postives = 324/354 (91.53%), Query Frame = 1 Query: 31 GSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
G DSRFFTT KKGE HELR EL++ +R+ K DAVKKVIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAK+QP+LTLLAVNTFVKDA+DPNPLIRALAVRTMGCIRV++ITEYLC+PL +ALRDEDPYVRKTAAVCVAKLYDI LV+++GFL++L DLI D NP+VVAN VAALSEI +T G+DVM+I TSVLQKLLAALNECTEWGQVFILDSLAKY+P D REAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ + +N+DT R+ TRKLAPPLVTLLNSEPE QYVALRNINLIVQKR ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQV
Sbjct: 14 GHDSRFFTTQKKGEMHELRMELHSTDRNTKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKSQPELTLLAVNTFVKDASDPNPLIRALAVRTMGCIRVDRITEYLCDPLSRALRDEDPYVRKTAAVCVAKLYDIAPALVQERGFLEILHDLISDSNPSVVANGVAALSEIAETSGKDVMKISTSVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGNSNSDTIRNLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPTILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQV 367
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: A0A7S3LFQ5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFQ5_9STRA) HSP 1 Score: 555 bits (1430), Expect = 2.560e-189 Identity = 288/352 (81.82%), Postives = 319/352 (90.62%), Query Frame = 1 Query: 37 DSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV--TNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
DSRFFTT KKGE HELR EL++ +R K DAVKKVIA+MTVGKDV+MLFTDV+NC+QT NIELKKLVYLYLINYAKTQP+LTLLAVNTFVKDA+D NPLIRALAVRTMGCIRV++ITEYLCEPL +ALRD+DPYVRKTAAVCVAKLYDIN ELV ++GFL+VL DLI D NP+VVAN VAALSEI +T G+DVM+I SVLQKLLAALNECTEWGQVFILDSLAKY+P DGREAEGIIERVTPRLQHANSAVVMSAVKV+LSY++ + N+D+ R TRKLAPPLVTLLNSEPE QYVALRNINLIVQKR ILE+EIKVFFCKYNDPIYVKMEKLE II+LV ++NIDQV
Sbjct: 6 DSRFFTTQKKGEMHELRMELHSTDRAVKVDAVKKVIASMTVGKDVSMLFTDVLNCVQTGNIELKKLVYLYLINYAKTQPELTLLAVNTFVKDASDANPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDDDPYVRKTAAVCVAKLYDINPELVVERGFLEVLHDLISDSNPSVVANGVAALSEIAETSGKDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADGREAEGIIERVTPRLQHANSAVVMSAVKVILSYMELMGSANSDSIRHLTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRPHILENEIKVFFCKYNDPIYVKMEKLEIIIKLVTEKNIDQV 357
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Match: B8C7W7_THAPS (Beta subunit of tetrameric clathrin adaptor complex AP1 n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8C7W7_THAPS) HSP 1 Score: 555 bits (1431), Expect = 5.030e-189 Identity = 290/367 (79.02%), Postives = 322/367 (87.74%), Query Frame = 1 Query: 1 MAGRAVRAPGGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANMTVGKDVAMLFTDVVNCIQTENIELKKLVYLYLINYAKTQPDLTLLAVNTFVKDANDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKALRDEDPYVRKTAAVCVAKLYDINAELVEDQGFLQVLRDLICDPNPTVVANAVAALSEIGDTCGRDVMEIDTSVLQKLLAALNECTEWGQVFILDSLAKYSPVDGREAEGIIERVTPRLQHANSAVVMSAVKVVLSYLDSV-----TNADTARSFTRKLAPPLVTLLNSEPETQYVALRNINLIVQKRSGILESEIKVFFCKYNDPIYVKMEKLETIIRLVNDRNIDQV 1086
MA + + GGSDSRFF T KKGE HELR EL + +R K DAVKKVIA+MTVGKDV+ LFTDV+NC QT NIELKKLVYLYLINYAK+QP+LTLLAVNTFVKDAND NPLIRALAVRTMGCIRV++ITEYLCEPL +ALRD DPYVRKTAAVCVAKLYDI ELV+++GF++ L DLI D NP+VVAN VAALSEI +T GRDVM+I SVLQKLLAALNECTEWGQVFILDSLAKY+P D REAEGIIERVTPRLQHANSAVVMSAVKV+LSY+D + +AD+ R+ TRKLAPPLVTLLNSEPE QYVALRNINLIVQKRS ILE+EIKVFFCKYNDPIYVKMEKLE II+LV+++NIDQV
Sbjct: 1 MAPKDTASSGGSDSRFFNTPKKGEMHELRMELQSTDRTIKVDAVKKVIASMTVGKDVSTLFTDVLNCAQTANIELKKLVYLYLINYAKSQPELTLLAVNTFVKDANDTNPLIRALAVRTMGCIRVDRITEYLCEPLSRALRDNDPYVRKTAAVCVAKLYDIAPELVQERGFIETLHDLISDSNPSVVANGVAALSEISETSGRDVMKISASVLQKLLAALNECTEWGQVFILDSLAKYTPADAREAEGIIERVTPRLQHANSAVVMSAVKVILSYMDVMGGSGGAHADSIRALTRKLAPPLVTLLNSEPEIQYVALRNINLIVQKRSNILENEIKVFFCKYNDPIYVKMEKLEIIIKLVSEKNIDQV 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9424.17181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9424.17181.1 >prot_H-paniculata_contig9424.17181.1 ID=prot_H-paniculata_contig9424.17181.1|Name=mRNA_H-paniculata_contig9424.17181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp MAGRAVRAPGGSDSRFFTTTKKGETHELREELNAPNRDKKKDAVKKVIANback to top mRNA from alignment at H-paniculata_contig9424:677..8419- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9424.17181.1 ID=mRNA_H-paniculata_contig9424.17181.1|Name=mRNA_H-paniculata_contig9424.17181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7743bp|location=Sequence derived from alignment at H-paniculata_contig9424:677..8419- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9424:677..8419- >mRNA_H-paniculata_contig9424.17181.1 ID=mRNA_H-paniculata_contig9424.17181.1|Name=mRNA_H-paniculata_contig9424.17181.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2214bp|location=Sequence derived from alignment at H-paniculata_contig9424:677..8419- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |