prot_H-paniculata_contig9413.17174.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9413.17174.1
Unique Nameprot_H-paniculata_contig9413.17174.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length310
Homology
BLAST of mRNA_H-paniculata_contig9413.17174.1 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.630e-26
Identity = 97/235 (41.28%), Postives = 119/235 (50.64%), Query Frame = 0
Query:    1 MYQDQKISEARSSTDTDANCNPNWTRQPKHVFTFFVPATVLLTDLKLVLEVHNDNLLADALIGTTGLISVDKVDDGEPRWWNVSGGGTLQAAVKLISDQGASSAPSASXXXXXGSRVXXXXXXXXXXXXXXXXXXXXXXXVQ----APAAPVPAPVPVVPGQPAPTSYG--THVQASMHDPPPYTAYATPAVAPGASSGSSAGQYRPPPVAPGAAAA--TPYAPANYSNTKDAYG 227
            ++   KI E RSST TD   NP W    + VFTF+VPATV L  L +VL+V NDNL+AD++IGTTG I +     GE +WWNVS GGTLQA ++LI+ +        +      SR XXXXXX                 V     +P   V    PV  G P   +YG  T V  +M DPPP    +  AVA           YRPPPVAPGAA A   P+  A Y  +   YG
Sbjct:  198 LFNGHKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLKTAATGESKWWNVSSGGTLQAIIELITPESGGXXXXXTHPNIAYSRSXXXXXXPAVASSRPSGGSYNGGRVATVNPSPHVAVAHATPVAAGAPG-NAYGGATPVATAMSDPPPSYEQSHVAVA---------SSYRPPPVAPGAAPAPAVPHGGAAYEKSNQ-YG 421          
BLAST of mRNA_H-paniculata_contig9413.17174.1 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 5.810e-24
Identity = 92/245 (37.55%), Postives = 121/245 (49.39%), Query Frame = 0
Query:    1 MYQDQKISEARSSTDTDANCNPNWTRQPKHVFTFFVPATVLLTDLKLVLEVHNDNLLADALIGTTGLISVDKVDDGEPRWWNVSGGGTLQAAVKLISDQGASSAPSASXXXXXGSRVXXXXXXXXXXXXXXXXXXXXXXXVQAPAAPVPAPVPVVPGQPAPTSYGTHVQASMHDPPPYTA--YATPAVA-----------PGASSGSS-----------AGQYRPPPVAPGA--AAATPYAPANY 219
            ++   KI E RSST TD   NP W    K VFTF+VPATV L  L +VL+V NDNL+AD++IGTTG I +     GE +WWN+S GGT+QA ++LI+ +      + +      SR                          + AA  PA   V   +P+  SYG    A+++ PPP+ A  +ATP  A           PGA + S+           A  YRPPPVAPGA  A A P+  A Y
Sbjct:  216 LFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQTAATGESKWWNISSGGTIQAIIELITPESGGGGGTGTHPNTAYSR-------------------------NSAAAADPA---VASSRPSGGSYGGGRVATVN-PPPHVAVAHATPVAAGAPGNAYGGAAPGAMAMSNPPPSYESHVAVASSYRPPPVAPGATPAPAGPHGGAAY 431          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9413.17174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMN7_ECTSI1.630e-2641.28C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JZ55_9PHAE5.810e-2437.55C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9413contigH-paniculata_contig9413:1626..7743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9413.17174.1mRNA_H-paniculata_contig9413.17174.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9413 1547..9400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9413.17174.1 ID=prot_H-paniculata_contig9413.17174.1|Name=mRNA_H-paniculata_contig9413.17174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
MYQDQKISEARSSTDTDANCNPNWTRQPKHVFTFFVPATVLLTDLKLVLE
VHNDNLLADALIGTTGLISVDKVDDGEPRWWNVSGGGTLQAAVKLISDQG
ASSAPSASSSNPAGSRVYGGAQQNHYYTNNYYGGGGGGGGVQAPAAPVPA
PVPVVPGQPAPTSYGTHVQASMHDPPPYTAYATPAVAPGASSGSSAGQYR
PPPVAPGAAAATPYAPANYSNTKDAYGGSGGGRGEATALPQAQPVVNGTA
YGNGWGTGATAAAPAGNGTYPVVPYPPSSAGSAGAGAGAASSGGGSYAVQ
QSRQYYGQM*
back to top