prot_H-paniculata_contig9400.17165.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9400.17165.1
Unique Nameprot_H-paniculata_contig9400.17165.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length175
Homology
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A6H5JWA0_9PHAE (SpoU_methylase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWA0_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 2.060e-67
Identity = 117/190 (61.58%), Postives = 142/190 (74.74%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSN------VFLVSKQLKLGSRCIADVDFF---PRPSPSSSTP------LSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEESAR-ICVPAVYLPMRDDLIRSYNLSNAVSGLV 174
            ML+VVLFRP IP+NTGNIGRTCLGFGARLHL++PLGF+L+EREVKRAGLDHWE VDL VH+SW  F E++LP + H+N      ++LVSK+LKLGS  IA+VDFF   P+P P ++ P      LS    T+  S    G V L+FGNE +GL+GLEE  R   +PAVYLPMRDD+IRSYNLSNAV+  V
Sbjct:    1 MLHVVLFRPLIPANTGNIGRTCLGFGARLHLVKPLGFDLSEREVKRAGLDHWEHVDLAVHNSWTCFTESMLPVLSHNNSGGGGNIYLVSKRLKLGSTPIAEVDFFAPTPKPPPIAAQPGGGAGELSSD--TVGSSACSQGDVTLVFGNEVDGLSGLEEGERGRALPAVYLPMRDDVIRSYNLSNAVAMAV 188          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: M2Y4W0_GALSU (tRNA/rRNA methyltransferase isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4W0_GALSU)

HSP 1 Score: 122 bits (307), Expect = 1.490e-31
Identity = 74/171 (43.27%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    2 LNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEESARICVPAVYLPMRDD-LIRSYNLSNAVS 171
            +NVVLF+P+IP NTGNIGRTCL FGA+LHLI PLGF + E  V+RAGLD+W+ VD K    W DF + V     +S+++ ++ Q   G+  +  V F                       K  G V LIFG+ETEG   L   A     +VY+PM++  ++RS+NLSNAV+
Sbjct:   85 INVVLFQPKIPGNTGNIGRTCLAFGAKLHLIGPLGFSIDEHAVRRAGLDYWKYVDWKYSSCWEDFEKGVPE---NSHIYFITTQ---GTVSLERVTF-----------------------KTTGPVFLIFGSETEGFQQLPIKALDKGTSVYIPMQNKHIVRSHNLSNAVA 226          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A6B2LL55_9EUKA (SpoU_methylase domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LL55_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 8.090e-31
Identity = 78/176 (44.32%), Postives = 99/176 (56.25%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGL-AGLEESARICVPAVYLPM----RDDLIRSYNLSNAVS 171
            ML+VVL RPQIP+NTG+IGRTCL F A+LHL+ PLGF L   +VKRAGLD+W+ VDL V+D W  F E     + H   F +SK    GS  + D  F     PSSS+  +P   T            L+FG+ET GL   + E A    P + LPM    R     S+NL++ VS
Sbjct:    1 MLHVVLVRPQIPTNTGSIGRTCLNFDAKLHLVGPLGFSLDSSKVKRAGLDYWQHVDLSVYDDWEHFEEKNRELLVHR--FYLSK---FGSTSLLDARF-----PSSSSGTTPRSTT------------LVFGSETSGLYETIGEKAMQGYPVISLPMLTAFRSKDTPSFNLASCVS 154          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A2V3IEW0_9FLOR (Putative tRNA (Cytidine(34)-2'-O)-methyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEW0_9FLOR)

HSP 1 Score: 119 bits (297), Expect = 5.230e-30
Identity = 68/173 (39.31%), Postives = 92/173 (53.18%), Query Frame = 0
Query:    2 LNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEE---SARICVPAVYLPMRDDLIRSYNLSNAVS 171
            L+VV   PQI  NTGNIGRTCLG GA LHLI PLGF L E++V+RAGLD+W+ VD++V++ W  FA   +  +G + +F      K G RC +++++  R                       G   L+FG+E  G  G+ +   S       V  PM DD  RS+NLS   S
Sbjct:   75 LHVVFVHPQIHWNTGNIGRTCLGLGAALHLIGPLGFSLDEKQVRRAGLDYWQHVDVRVYEDWAQFANGKMKQLGGTRLFFT----KFGDRCASEIEWNER-----------------------GKTVLVFGSEVHGFDGIRDWLHSEGKHEIRVAFPMVDDRFRSFNLSTTAS 220          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A1X6NP17_PORUM (SpoU_methylase domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NP17_PORUM)

HSP 1 Score: 114 bits (285), Expect = 4.560e-29
Identity = 67/177 (37.85%), Postives = 91/177 (51.41%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEG---LAGLEESARICVPAVYLPMRDDLIRSYNLSNAVSGLV 174
            ML+VV   PQIP NTGNIGRTCLG G RLHLI P+ F L+   V+RAGLD+W  VD+ +H+SW  F + VLPG+G                   D  F+ + +P +   +               GV L+FG+E +G   +AG  E      P  +  +  D  R++NLS + S  V
Sbjct:    1 MLHVVFVSPQIPWNTGNIGRTCLGLGVRLHLIPPISFSLSAAAVRRAGLDYWWGVDVTIHESWATFRDEVLPGLG-------------------DAYFYTKHAPVTQVDVE---------YDDARGVVLLFGSEVDGFDSIAGEWEGVPDATPVAFPMVEGDRFRAFNLSTSASMAV 149          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A6I6BJW5_9BACL (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=11 Tax=Gemella TaxID=1378 RepID=A0A6I6BJW5_9BACL)

HSP 1 Score: 114 bits (284), Expect = 5.160e-29
Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEESARICVPAVYLPMRDDLIRSYNLSNAVSGLV 174
            M N+VLF+P+IP+NTGNI RTC+G   RLHLIRPLGF + ++ VKRAGLD+WE +DL V DS+ +F E         N +L++K    G +  +D DF                     S K    +  IFG ET+GL   E   +    A+ +PM ++ +RS NLSN  + ++
Sbjct:    1 MNNIVLFQPEIPANTGNIARTCVGTNTRLHLIRPLGFSIDDKHVKRAGLDYWEHLDLIVWDSFDEFLE----ATSDKNYYLITK---FGQKIYSDFDF---------------------SNKNDEEIYFIFGRETKGLP-KEFREKYSEQALRIPMSEN-VRSLNLSNTAALII 144          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A7X6TWP8_CLOSP (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. TaxID=1506 RepID=A0A7X6TWP8_CLOSP)

HSP 1 Score: 113 bits (282), Expect = 9.490e-29
Identity = 49/98 (50.00%), Postives = 77/98 (78.57%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDF 98
            MLN++LF+P+IP NTGNIGRTC+  G+RLHLI+PLGFE+++++++R GLD+W+ VDL+VH+SW DF +N  P    + VF ++ +   G++C +D+ +
Sbjct:    1 MLNIILFQPEIPQNTGNIGRTCVLTGSRLHLIKPLGFEISDKQIRRTGLDYWKEVDLEVHESWEDF-KNKYP---EAAVFAITTK---GTQCYSDISY 91          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: A0A4Y9HHW6_9BACL (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=unclassified Gemella TaxID=2624949 RepID=A0A4Y9HHW6_9BACL)

HSP 1 Score: 112 bits (279), Expect = 2.920e-28
Identity = 70/174 (40.23%), Postives = 95/174 (54.60%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEESARICVPAVYLPMRDDLIRSYNLSNAVSGLV 174
            M N+VLF+P+IP+NTGNI RTC+G   RLHLI+PLGF + ++ VKRAGLD+W+ +DL V +S  DF EN        N FLV+K    G +   D DF                     S +    + LIFG ET+GL   E   +     + +PM D  +RS NLSN  + ++
Sbjct:    1 MNNIVLFQPEIPANTGNIARTCVGTNTRLHLIKPLGFSIDDKHVKRAGLDYWDNLDLVVWESMDDFLENTKD----KNYFLVTK---FGKQNYTDFDF---------------------SNQDNEDIYLIFGKETKGLPE-EFREKYKEQTLRIPMTDK-VRSLNLSNTAAMII 144          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: R7MA94_9CLOT (Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Clostridium sp. CAG:567 TaxID=1262820 RepID=R7MA94_9CLOT)

HSP 1 Score: 111 bits (278), Expect = 5.290e-28
Identity = 66/174 (37.93%), Postives = 100/174 (57.47%), Query Frame = 0
Query:    2 LNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEESARICVP-AVYLPMRDDLIRSYNLSNAVSGLV 174
            LN+V+  P+IP NTGNI RT    GA+LHL++PLGFE+T++ +KRAGLD+W+++D+++H+S   F E   P   H+  F  +K    G +C +DVD+                            V ++FG ET+GL   EE  +  +   + +PMR+ L RS NLSN+V+ +V
Sbjct:    3 LNIVMVEPEIPQNTGNIARTAAAIGAKLHLVKPLGFEITDKYLKRAGLDYWDKLDIEIHESLEMFLEKYKPE-EHAMYFATTK----GKQCYSDVDYTKSEE-----------------------VFILFGKETKGLP--EELLQKYIKNTIRIPMREHL-RSLNLSNSVAIVV 145          
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Match: UPI001C045692 (tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL n=1 Tax=unclassified Gemella TaxID=2624949 RepID=UPI001C045692)

HSP 1 Score: 110 bits (274), Expect = 1.650e-27
Identity = 69/172 (40.12%), Postives = 95/172 (55.23%), Query Frame = 0
Query:    1 MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLDHWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFPRPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGL-AGLEESARICVPAVYLPMRDDLIRSYNLSNAVS 171
            M N+VLF+P+IP+NTGN+ RTC+G GARLHLI PLGF + ++ +KRAGLD+WE +DL + DS  DF +N        N FL++K    GS   ++ DF                     S +    +  IFG ET+GL A   E        + +P+ D  +RS NLSN V+
Sbjct:    1 MNNIVLFQPEIPANTGNVARTCVGAGARLHLIMPLGFSIDDKHLKRAGLDYWEHLDLVIWDSLEDFLKNT----SDKNYFLITK---FGSETYSNFDF---------------------SNENNEELYFIFGRETKGLPASFREE--YYNKTLRIPITDK-VRSLNLSNTVA 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9400.17165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWA0_9PHAE2.060e-6761.58SpoU_methylase domain-containing protein n=2 Tax=E... [more]
M2Y4W0_GALSU1.490e-3143.27tRNA/rRNA methyltransferase isoform 1 n=1 Tax=Gald... [more]
A0A6B2LL55_9EUKA8.090e-3144.32SpoU_methylase domain-containing protein n=1 Tax=A... [more]
A0A2V3IEW0_9FLOR5.230e-3039.31Putative tRNA (Cytidine(34)-2'-O)-methyltransferas... [more]
A0A1X6NP17_PORUM4.560e-2937.85SpoU_methylase domain-containing protein n=1 Tax=P... [more]
A0A6I6BJW5_9BACL5.160e-2939.66Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A7X6TWP8_CLOSP9.490e-2950.00Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
A0A4Y9HHW6_9BACL2.920e-2840.23Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
R7MA94_9CLOT5.290e-2837.93Putative tRNA (cytidine(34)-2'-O)-methyltransferas... [more]
UPI001C0456921.650e-2740.12tRNA (uridine(34)/cytosine(34)/5- carboxymethylami... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001537tRNA/rRNA methyltransferase, SpoU typePFAMPF00588SpoU_methylasecoord: 2..171
e-value: 9.0E-23
score: 81.0
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferasePIRSFPIRSF029256SpoU_TrmHcoord: 1..99
e-value: 1.2E-29
score: 100.9
coord: 118..174
e-value: 2.0E-4
score: 19.0
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferasePANTHERPTHR42971FAMILY NOT NAMEDcoord: 1..171
IPR016914tRNA (cytidine/uridine-2'-O-)-methyltransferaseHAMAPMF_01885tRNA_methyltr_TrmLcoord: 2..174
score: 25.898
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 1..174
e-value: 3.3E-42
score: 145.8
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 1..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9400contigH-paniculata_contig9400:301..3787 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9400.17165.1mRNA_H-paniculata_contig9400.17165.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9400 301..3811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9400.17165.1 ID=prot_H-paniculata_contig9400.17165.1|Name=mRNA_H-paniculata_contig9400.17165.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MLNVVLFRPQIPSNTGNIGRTCLGFGARLHLIRPLGFELTEREVKRAGLD
HWERVDLKVHDSWHDFAENVLPGIGHSNVFLVSKQLKLGSRCIADVDFFP
RPSPSSSTPLSPPRWTIPPSLKGGGGVALIFGNETEGLAGLEESARICVP
AVYLPMRDDLIRSYNLSNAVSGLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001537SpoU_MeTrfase
IPR016914tRNA_cyt/urid_MeTfrase
IPR029026tRNA_m1G_MTases_N
IPR029028Alpha/beta_knot_MTases