prot_H-paniculata_contig12721.1713.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12721.1713.1
Unique Nameprot_H-paniculata_contig12721.1713.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length827
Homology
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: A0A6H5JGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP4_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 1.590e-46
Identity = 125/319 (39.18%), Postives = 170/319 (53.29%), Query Frame = 0
Query:    1 MVLLGSPMVDATLEDVQGLQTVIEVLKDEMGMI--AEGGEGAXXXXXXXXDGSRVVVTMPEDAPQNTHRTPWVQCDRCFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNEDVSQMSVIFSGTVKVDK-FAVGDWLDVWCRRTKIWYPAKVVRVDERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQPVLATAKSIGLKKGGDAEPETA-----------SDGGEMSDNSRNSHGAAXXXXXXXXXXSKSKGAAQPPARSVTPTIASTESDYVYYGDGGLPGKRSMTREERTAARLSRRPPEDH 305
            +VLLGSPMVDATLED QGL+ VIE+LK E G+   A G EGA              + M ED PQN+  TPW QCDRC KWR++PW ++ E L + + CE+N W+ E  SC+V   EI +E+  + SVI    +  +K   V  W+DV+C +T  WYPAKV++ D    R+ V F  W +R+++WV+ +  DRI ++H HTQ V    K +    G  +                  GG  SD  R + G+           S  K  A   A++ TP     +SD+VYY   G P K S++REER  AR +R P   H
Sbjct: 2807 LVLLGSPMVDATLEDTQGLKEVIEILKRETGLSDGANGDEGAS------------TLRMEEDGPQNSTPTPWAQCDRCLKWRRIPWHIDPETLPELWTCENNTWDPETASCDV--AEIVDEEDMEASVIAGSAIVEEKALVVSSWIDVFCNQTHKWYPAKVIKEDREGDRVLVQFFGWSERYNQWVSKKSKDRIRRVHTHTQEVAPARKWLNKMYGRGSXXXXXXXXXXXXXXLPKKGG--SDGDRGASGSGCG--------SNGKRKAAVLAKTATP-----KSDFVYYD--GAP-KSSLSREERIVARRNRTPAGPH 3093          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: D8LRP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP6_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 6.480e-45
Identity = 97/224 (43.30%), Postives = 136/224 (60.71%), Query Frame = 0
Query:    1 MVLLGSPMVDATLEDVQGLQTVIEVLKDEMGMIAEGGEGAXXXXXXXXDGSRVVVTMPEDAPQNTHRTPWVQCDRCFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNEDVSQMSVIFSGTVKVDK-FAVGDWLDVWCRRTKIWYPAKVVRVDERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQPVLATAKSI----GLKKGGDAEPE 219
            +VLLGSPMVDATLED QGL+ VIE+LK E G+ +EG  G         D   + + M ED PQN+  TPW QCDRC KWR++PW ++ E L + + CE+N W+ E  SC+V   E+ +E+  + SVI    +  +K   V  W+DV+C +T  WYPAKV++ D    R+ V F  W +R+++WV+ +  DRI ++H HTQ V    K +    G   GG +E E
Sbjct: 2632 LVLLGSPMVDATLEDTQGLKEVIEILKRETGL-SEGANG---------DEGAITLRMEEDGPQNSTPTPWAQCDRCLKWRRIPWHIDPETLPELWTCENNTWDPETASCDV--AEVVDEEDMEASVIAGSAIVEEKALVVSSWIDVFCNQTHKWYPAKVIKEDREGDRVLVQFFGWSERYNQWVSKKSKDRIRRVHTHTQEVAPARKWLNKMYGPGSGGGSEAE 2843          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: A0A7S2ASC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ASC1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.980e-18
Identity = 65/184 (35.33%), Postives = 88/184 (47.83%), Query Frame = 0
Query:   18 GLQTVIEVLKDEMGMIAEGGEGAXXXXXXXXDGSRVVVTMPEDAPQNTHRTPWVQCDRCFKWRKMPWFVNTELLGDKFY--CED-NRWNLEEN-------SCEVDPEEITNEDVSQMSVIFSGTVKVDKFAVGDWLDVWCRRTKIWYPAKVVRVDERLKRIKVHFHKWQKRFDEWVNMEDSDRI 191
            GLQTV E L +E+G+      G          GS  V+    D   N     WVQC++C KWR++PWFV+ E LG+ F   C D N+WN  ++       SC+  PE+  +     +       V       G  +D WC +   WY AKVVR   R   I +HF  W K  DEW+ + DSDR+
Sbjct:    1 GLQTVTETLHEELGLDKVKSNGVNELKPMDT-GSDDVIDKALDEKTNN----WVQCEKCEKWRRLPWFVDLEELGENFSFTCSDGNKWNRGDSNKSSLTLSCDT-PEDGYDPSSEIVRAATGDRVPAGLLQAGLEVDAWCTKNMRWYEAKVVR--RRDDDILIHFKGWNKSADEWIAV-DSDRL 175          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: A0A836CJD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.130e-17
Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 0
Query:   59 EDAPQNTHRTPWVQCDRCFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNEDVSQMSVIFSGTVKVDKFAVGD-------------------WLDVWCRRTKIWYPAKVVRVDERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQPVLATAK 206
            ED P++  ++ WVQCDRC +WR+MPW  +   + D F C DN W  +  SC+V+ EE       +  V    TV   +   GD                   W+D +C +T+ WYPAK++ V+    R+KVHF+ W  ++DEW+       +  +HA T+    TAK
Sbjct: 1774 EDQPES--KSLWVQCDRCKRWRRMPWHCSEADVPDAFVCADNAWAPQFGSCDVEEEE-----EGEGEVWSDATVPAAEGDGGDMGGXXXXXXXXXXGLLEGLWIDAYCSKTEQWYPAKLLSVEPG--RVKVHFNMWNPKYDEWLQ-RGKGYLQDLHARTRTTRHTAK 1930          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: K0RQ88_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RQ88_THAOC)

HSP 1 Score: 99.0 bits (245), Expect = 2.380e-17
Identity = 61/160 (38.12%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   57 MPEDAPQNTHRTPWVQCD--RCFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNEDVSQMSVIFSGTVKVDKFAVGDWLDVWCRRTKIWYPAKVVRVD--ERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQPVLATAKSIGLKK 212
            MP  A  N     WVQC+  +C KWRK+PW V+ +LL +KF+C+DN+WN  + SCE  PE+  + D+    V F      D F +G W DV   +   ++ A+VV VD   ++KR+K HF+K     DEW+++  S RIA   +  Q     A   G  K
Sbjct:  791 MPAQAVAN-----WVQCENPKCLKWRKLPWHVDVDLLPEKFFCKDNKWNPGKRSCES-PED--DWDMDDAPVKFD--TNNDNFEIGAWFDVQREKKISYHEAQVVAVDLKSKVKRVKFHFYKLSSERDEWIDI-GSPRIAPHPSFVQHSYTPAPRAGYGK 939          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: A0A7S2KB67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB67_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.970e-15
Identity = 67/210 (31.90%), Postives = 103/210 (49.05%), Query Frame = 0
Query:    4 LGSPMVDATLEDVQGLQTVIEVLKDEMGMIAEGGEGAXXXXXXXXDGSRVVVTMPEDAPQNTHRTPWVQCD--RCFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNEDVSQMSVIFSGTVKVDKFAVGDWLDVWCRRTKIWYP-AKVVRVD--ERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHT-QPVLATAKS 207
            +GSP++D     + G+   I+ +   +    E  +             R+  T+ E  P       WVQC+  +C KWRK+PW V+ +LL DKFYC+DN WN    +C+   ++    D+    + F        F VG W DV  R  KI Y  A+VV +D    +KR+K  F++ +   DEWV +  S RIA  H++T +P +  A +
Sbjct: 1330 MGSPIIDYL---ITGMDENIKKISAALKGKEEESDETKSKRSKLSTSDRLQSTVDEGMPAQAVAN-WVQCEDPKCLKWRKLPWHVDVDLLPDKFYCKDNVWNPNRQTCDSTEDDW---DMDDAPIKFDSN---QNFEVGAWFDVQ-REGKIGYSEAQVVELDFNSNVKRVKFTFYRLKNDRDEWVEV-GSPRIAPHHSYTPRPFIGGAST 1527          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: A0A7S2YL82_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YL82_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.380e-15
Identity = 69/222 (31.08%), Postives = 106/222 (47.75%), Query Frame = 0
Query:    5 GSPMVDATLE-DVQGLQTVIEVLKDEMGMIAEGGEGAXXXXXXXXDGSRVVVTMPEDAPQNTHRTPWVQCDR--CFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNED--VSQMSVIFSGTVKVDKFA---------VGDWLDVW--CRRTKIWYPAKVVRVD--ERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQPVLATAKSI 208
            GSP++D  +  D  G+  V+E L D    ++ GG+ A            ++ ++    P       WVQC+   C KWRKMPW V+ +LL +KF+C+DN+W+   N+CE   ++   +D  V     +    +K D+F          VG   DV    R  K +    V  VD   ++KR+K H++K     DEW+    S RIA +H+ T P+    K I
Sbjct:  160 GSPVLDFLVSGDESGIFAVLEEL-DADNKVSTGGDDAD-----------LLTSVDRGRPAQAV-CRWVQCENPDCLKWRKMPWHVDIDLLPEKFFCKDNKWDKLRNNCEAPEDDWDKDDKIVGSDGKVEGSPIKKDQFTSPSHEWSFRVGAKFDVLRQTRGAKKFCVGTVTHVDFSGKVKRVKFHYNKTPSESDEWIPF-GSKRIAPLHSKTTPISKKRKLI 367          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: B7FW59_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FW59_PHATC)

HSP 1 Score: 84.7 bits (208), Expect = 6.160e-13
Identity = 53/153 (34.64%), Postives = 78/153 (50.98%), Query Frame = 0
Query:   70 WVQCDR--CFKWRKMPWFVNTELLGDKFYCEDNRWNLEENSCEVDPEEITNED--VSQMSVIFSGTVKVDK-----------FAVGDWLDVWCRRTKIWYPAKVVRVD--ERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQPVLATA 205
            WVQC+   C KWRK+PW V+ +LL +KFYC+DN WN   NSC    ++  N D  V +   +    ++  K           F  G   D+   R + +   +VV+VD   ++KRI  HF K   ++DEW+    S RI+ +H+   P  A A
Sbjct: 1780 WVQCENPVCLKWRKVPWHVDVDLLPEKFYCKDNAWNPNANSCTKAEDDWDNADAMVGRDGKVEGSPIRKKKHSELSPIEESSFTAGARFDIL--RKEKYVVGRVVKVDFSGKVKRILFHFLKKHSKYDEWIEF-GSPRISSLHSKIAPRAAKA 1929          
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Match: X6NEB3_RETFI (Mastermind n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NEB3_RETFI)

HSP 1 Score: 57.8 bits (138), Expect = 4.280e-5
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:   70 WVQCDRCFKWRKMPWFVNTELLGDK-FYCEDNRWNLEENSCE 110
            W+QCDRCFKWR++P  V+ E LG+K +YCE N W+   N+CE
Sbjct:  157 WIQCDRCFKWRRIPNTVSDEELGEKAWYCELNLWDPLHNACE 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12721.1713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5JGP4_9PHAE1.590e-4639.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRP6_ECTSI6.480e-4543.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2ASC1_9STRA5.980e-1835.33Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A836CJD9_9STRA1.130e-1733.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0RQ88_THAOC2.380e-1738.13Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2KB67_9STRA5.970e-1531.90Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2YL82_9STRA6.380e-1531.08Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FW59_PHATC6.160e-1334.64Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
X6NEB3_RETFI4.280e-557.14Mastermind n=1 Tax=Reticulomyxa filosa TaxID=46433... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011124Zinc finger, CW-typePFAMPF07496zf-CWcoord: 70..114
e-value: 7.5E-12
score: 45.1
IPR011124Zinc finger, CW-typePROSITEPS51050ZF_CWcoord: 64..117
score: 12.247
IPR025995RNA binding activity-knot of a chromodomainPFAMPF11717Tudor-knotcoord: 144..186
e-value: 8.3E-5
score: 22.4
NoneNo IPR availableGENE3D2.30.30.140coord: 134..197
e-value: 2.2E-13
score: 51.8
NoneNo IPR availableGENE3D3.30.40.100coord: 45..133
e-value: 3.3E-13
score: 51.3
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 135..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12721contigH-paniculata_contig12721:641..6778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12721.1713.1mRNA_H-paniculata_contig12721.1713.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12721 624..7451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12721.1713.1 ID=prot_H-paniculata_contig12721.1713.1|Name=mRNA_H-paniculata_contig12721.1713.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=827bp
MVLLGSPMVDATLEDVQGLQTVIEVLKDEMGMIAEGGEGAGAGAGAGGDG
SRVVVTMPEDAPQNTHRTPWVQCDRCFKWRKMPWFVNTELLGDKFYCEDN
RWNLEENSCEVDPEEITNEDVSQMSVIFSGTVKVDKFAVGDWLDVWCRRT
KIWYPAKVVRVDERLKRIKVHFHKWQKRFDEWVNMEDSDRIAKIHAHTQP
VLATAKSIGLKKGGDAEPETASDGGEMSDNSRNSHGAASASSGGGGGRSK
SKGAAQPPARSVTPTIASTESDYVYYGDGGLPGKRSMTREERTAARLSRR
PPEDHTKGLKRRKEQEVTAGGSGGWAGASAAAAAAAAAATADADPVGRRR
RSVNELARMVTMAERELVFGANTGASREQRVKKHARVMWAKIQYDRMSNG
DSDGSPLSDLAERSSSCSTGSPRDGLGMKKDEARGALVGLATFRKNRTSA
DAGEAGGLTATDGIRQGTTNNDAGGDTGALDAEGGAPEERTCDEVMRDGR
APEGSGRDGEVGAGGMAASAAATDGTNNPPHEHRAQSSHLPSPRERSSVG
ARHPPSRMGMKRKTGPPSSSSSRGRMMTPLMAMAHHTGERQVPLPREFAN
GGHYHDRRQYHHHPHGGTRSPRRHHRGALGGRSGQQSARSTGFSTPSPSP
PPPLLTNSVPRHSGISNILTVAGGILQQDDWPSSTAMLGGDVNNAQRLPS
RSAATATATAEDGARGFTRGATDVRAAVVADGRASSSSSLSPADEVDGRA
FPVNPRPRLPWNPALSGGGGQGQQGSGSGDSASEPQPSLRKSNRVSASAT
AGGNSNSSSGNHNHHNHHNHHHHHRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011124Znf_CW
IPR025995Tudor-knot
IPR016197Chromo-like_dom_sf