mRNA_H-paniculata_contig9356.17131.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9356.17131.1
Unique NamemRNA_H-paniculata_contig9356.17131.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: D8LD21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD21_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 1.950e-89
Identity = 142/194 (73.20%), Postives = 163/194 (84.02%), Query Frame = 3 
Query:    3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFG 584
            DPD   K+REEE  R K +R+N+M CAHDRSAER+VMEM I EK+ ACR+FR +GN FH EGQYRR ALQYRQAL+YYDFCF D++  Q ELD+ RQACLLNSAACFL C EL Q LDCCYQ L+ EP+NVKALYRRAVV+R RD F+EA+ DL KALAQRPN+VMLRKESA+LKSK+A+YRER KAMGEQIFG
Sbjct:   32 DPDELAKKREEEEKRAKSYRENHMACAHDRSAERKVMEMPIEEKISACRDFRQRGNLFHAEGQYRRGALQYRQALIYYDFCFPDEDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEQIFG 225
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A6H5KB41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB41_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.820e-57
Identity = 129/264 (48.86%), Postives = 153/264 (57.95%), Query Frame = 3 
Query:  111 MEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQV--------------LQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFG-------------AGRVMAVSEEEISVSHPDLSPPDSLVDMS---------TGAMPSTGLGGDYRVADGIGVEFRDGSITGDQEEGRRRHDL 794
            ME+ I EK+ ACR+FR  GN FH EGQ   A       L+YYDFCF D +  Q ELD+ RQACLLNSAACFL C EL Q LDCCYQ               L+ EP+NVKALYRRAVV+R RD F+EA+ DL KALAQRPN+VMLRKESA+LKSK+A+YRER KAMGE IFG             +G      ++E      D S P ++               A+     GG Y V   +      GS +G +EEGRR HDL
Sbjct:    1 MEVPIEEKISACRDFRQGGNLFHAEGQGSAA-------LIYYDFCFPDDDSQQQELDDIRQACLLNSAACFLACGELDQTLDCCYQASCCPLAHFLGRARALRAEPNNVKALYRRAVVYRLRDRFKEASVDLGKALAQRPNEVMLRKESAVLKSKIASYRERRKAMGEHIFGKEQGRDQDNARGSSGNNGRALQQESETQEKDGSEPSAVEAAEDDPYQCFAPAAAVGGNESGGGYAVTAAV---VPAGSGSG-KEEGRRWHDL 253
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A836CM33_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM33_9STRA)

HSP 1 Score: 163 bits (413), Expect = 5.940e-44
Identity = 89/174 (51.15%), Postives = 117/174 (67.24%), Query Frame = 3 
Query:   78 CAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALA----QRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGA 587
            C+HD SAE+R+M++S  EK+ AC  FR KGN F EEGQY+RA LQYRQAL+Y D+ F D  E+Q  LD+ R ACLLNSAACF+R  ELG+ L+ C Q LQE P   KALYRRA V+R +D F  A ADL+ A      +  +   LR E  +L+++   Y   ++A+G Q+FG+
Sbjct:   61 CSHDHSAEKRIMDLSEPEKVAACEAFRAKGNAFFEEGQYQRATLQYRQALIYCDYAFPDAGELQTRLDDVRLACLLNSAACFVRAGELGEALEACEQALQERPRCAKALYRRAQVYRLKDEFALAKADLAAAXXXXXPRAADAAALRHERMMLRARETCYGANARALGRQMFGS 234
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A7S2HHR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHR7_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.100e-35
Identity = 80/182 (43.96%), Postives = 117/182 (64.29%), Query Frame = 3 
Query:   75 TCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLEL-DETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAGRVMAVSEEE 617
            +C+HD S ER+V E+ + +K++A   F  +GN   +EGQY  A+ QY+ A+VYY++ F D+   + ++ +  R  C LNSAAC ++     + L+ CYQVL+EEP NVKALYRRA ++R RD F EA ADL  A  + PNDV LR+E   L +K+ +YR + +AM + IF A +     +EE
Sbjct:   44 SCSHDHSRERQVYELPLDKKIEAMDRFHLRGNILFDEGQYEMASEQYKSAMVYYEYTFPDEGSDEWDVVNRIRLVCNLNSAACNMKAGLYDEALNNCYQVLREEPLNVKALYRRAQMYRIRDQFSEAKADLLLAWRELPNDVQLRQEYLTLSNKIKSYRRKREAMAKHIFDAQKTRTRMQEE 225
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A662XSD5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSD5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.820e-33
Identity = 84/201 (41.79%), Postives = 120/201 (59.70%), Query Frame = 3 
Query:    3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQR-------PNDVMLRKESAILKSKMAAYRERSKAMGEQIFG 584
            DP+   ++ +    R +R  +  M C HD SAE+++M+MS  EKL AC EFR  GN F   GQY+RAA  Y +ALVY+++ F D EE  ++ D  +   LLN AAC L+   L   +    Q LQ +PDNVKALYRRA  +R +D F  A+ D+S+AL           +D +L +E A+L++KM AY+ R+K +   +FG
Sbjct:  110 DPEELARQEQAARERSERAAKAQMGCNHDHSAEQKLMDMSTQEKLTACDEFRVLGNLFFRHGQYQRAAYNYHKALVYFEYVFPDTEEEDIQADALKLKLLLNFAACRLKTLHLDDAIHHANQALQLDPDNVKALYRRAQAYRLKDEFELASQDISRALELSGTSENAPTSDPLLVQEKALLQAKMLAYKLRTKQVSTAMFG 310
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A7S2RXA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXA3_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.340e-31
Identity = 75/189 (39.68%), Postives = 112/189 (59.26%), Query Frame = 3 
Query:   84 HDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAG----RVMAVSEEEISVSHPD 638
            HD S+ER + E+ +  K+    ++   GN F++EG Y RA ++YR AL YY++ F + +     +D+ R  C LNSAAC L+   L + LD C QVL  EP+N+KALYRRA V+R  D + EA  D+++AL+  P+D   R+E   LK+KM AYR+ S  + + +   G       A  E+E+ V  P+
Sbjct:  164 HDHSSEREIFELPLETKISRMEDYHSMGNLFYDEGLYDRAVIEYRSALAYYEYTFPEDDATWQLIDKLRLVCHLNSAACHLKLRMLQEALDDCNQVLYAEPENLKALYRRAQVYRHMDKYTEARRDITRALSLAPHDFQAREEFVRLKTKMHAYRQNSAILAKAMLHGGGGPPSPEAEDEDELEVKSPE 352
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A6A3FIC8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FIC8_9STRA)

HSP 1 Score: 130 bits (328), Expect = 3.590e-31
Identity = 80/203 (39.41%), Postives = 117/203 (57.64%), Query Frame = 3 
Query:    3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALA-------QRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAG 590
            DP+   ++ +E   R +R  +  M C HD SAE+++M+M+ HEKL+AC EFR  GN F + GQY+RAA  Y +ALVY+++ FTD               LLN AAC L+   L   +    Q L+ + DNVKALYRRA  +R +D F  A  D+++A+         +  D ML +E  +L++KM AY+ R+K +   +FG G
Sbjct:   72 DPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTAHEKLRACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTLHLDDAVHHANQALEIDADNVKALYRRAQAYRLKDEFDLAQQDITRAIELSKAAGDSQSTDAMLVQEKTLLQAKMLAYKLRTKQVSAAMFGPG 274
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: H3GDM9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GDM9_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 3.500e-30
Identity = 82/203 (40.39%), Postives = 118/203 (58.13%), Query Frame = 3 
Query:    3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFREAAADLSKAL----AQRPN---DVMLRKESAILKSKMAAYRERSKAMGEQIFGAG 590
            DP+   ++ +E   R +R  +  M C+HD SAE+++M+M+  EKL AC EFR  GN F + GQY+RAA  Y +ALVY+++ FTD               LLN AAC L+   L   +    Q L+ +PDNVKALYRRA  FR +D F  A  D+++A+    A   N   D +L +E  +L++KM AY+ R+K +   +FG G
Sbjct:   71 DPEDLARQEQEARERSERAAKAQMGCSHDHSAEQKLMDMTTLEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVHHANQALEIDPDNVKALYRRAQAFRLKDEFDLAQKDVARAMEISKAAEENQAADPLLVQEKKLLQAKMLAYKLRTKQVSAAMFGNG 273
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A329SRI4_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329SRI4_9STRA)

HSP 1 Score: 127 bits (320), Expect = 5.060e-30
Identity = 88/227 (38.77%), Postives = 125/227 (55.07%), Query Frame = 3 
Query:    3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFR------EAAADLSKAL-AQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAGRVMAVSEEEISVSHPDLSPPDSLV 662
            DP+   ++ +E   R +R  +  M C HD SAE+++M+M+  EKL AC EFR  GN F + GQY+RAA  Y +ALVY+++ FTD               LLN AAC L+   L   +    Q L+ +P+NVKALYRRA  +R +D F       E A +LSKA  A +  D +L +E  +L++K+ AY+ R+K +   +FG G      E      HP L  PD+ V
Sbjct:   75 DPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVHHANQALEIDPNNVKALYRRAQAYRLKDEFDLAQKDIERAVELSKAAEATQSVDSLLIQEKKLLQAKVLAYKLRTKQVSAAMFGTGDKSKAPERY----HPGLRAPDANV 297
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BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Match: A0A8J5IGV9_9STRA (SCP domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IGV9_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.560e-28
Identity = 87/225 (38.67%), Postives = 124/225 (55.11%), Query Frame = 3 
Query:    3 DPDLATKRREEEAARLKRFRQNNMTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQVLQEEPDNVKALYRRAVVFRRRDCFR------EAAADLSKAL-AQRPNDVMLRKESAILKSKMAAYRERSKAMGEQIFGAGRVMAVSEEEISVSHPDLSPPDS 656
            DP+   ++ +E   R +R  +  M C HD SAE+++M+M+  EKL AC EFR  GN F + GQY+RAA  Y +ALVY+++ FTD               LLN AAC L+   L   +    Q L+ +P+NVKALYRRA  +R +D F       E A +LSKA  A +  D +L +E  +L++K+ AY+ R+K +   +FG G      E      HP L  PD+
Sbjct:  492 DPEELARQEQEARERSERAAKAQMGCNHDHSAEQKLMDMTTQEKLAACDEFRVLGNLFFKHGQYQRAAFHYHKALVYFEYVFTDXXXXXXXXXXXXXXLLLNFAACRLKTMHLDDAVHHANQALEIDPNNVKALYRRAQAYRLKDEFDLAQKDIERAVELSKAAEATQSVDSLLIQEKKLLQAKVLAYKLRTKQVSAAMFGTGDKSKAPERY----HPGLRAPDA 712
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9356.17131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD21_ECTSI1.950e-8973.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB41_9PHAE1.820e-5748.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM33_9STRA5.940e-4451.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2HHR7_9STRA4.100e-3543.96Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A662XSD5_9STRA2.820e-3341.79Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A7S2RXA3_9STRA3.340e-3139.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6A3FIC8_9STRA3.590e-3139.41Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
H3GDM9_PHYRM3.500e-3040.39Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A329SRI4_9STRA5.060e-3038.77Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A8J5IGV9_9STRA2.560e-2838.67SCP domain-containing protein n=1 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9356contigH-paniculata_contig9356:4765..9145 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.5
Seed ortholog evalue1.1e-67
Seed eggNOG ortholog2880.D8LD21
KEGG koko:K09571,ko:K20412
KEGG Pathwayko04915,map04915
Hectar predicted targeting categoryother localisation
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0071704,GO:0071944,GO:0099402,GO:0140096,GO:1901564
EggNOG free text desc.FK506 binding
EggNOG OGsCOG0545@1,KOG0543@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03110,ko04090
Exons7
Model size1163
Cds size795
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931163.8842096-UTR-H-paniculata_contig9356:4764..50611622931163.8842096-UTR-H-paniculata_contig9356:4764..5061Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9356 4765..5061 -
1691481619.1364093-UTR-H-paniculata_contig9356:4764..50611691481619.1364093-UTR-H-paniculata_contig9356:4764..5061Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9356 4765..5061 -
1622931164.0660853-UTR-H-paniculata_contig9356:9074..91451622931164.0660853-UTR-H-paniculata_contig9356:9074..9145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9356 9075..9145 -
1691481619.206293-UTR-H-paniculata_contig9356:9074..91451691481619.206293-UTR-H-paniculata_contig9356:9074..9145Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9356 9075..9145 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931163.9022858-CDS-H-paniculata_contig9356:5061..51271622931163.9022858-CDS-H-paniculata_contig9356:5061..5127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 5062..5127 -
1691481619.1469584-CDS-H-paniculata_contig9356:5061..51271691481619.1469584-CDS-H-paniculata_contig9356:5061..5127Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 5062..5127 -
1622931163.925846-CDS-H-paniculata_contig9356:6043..63161622931163.925846-CDS-H-paniculata_contig9356:6043..6316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 6044..6316 -
1691481619.1548836-CDS-H-paniculata_contig9356:6043..63161691481619.1548836-CDS-H-paniculata_contig9356:6043..6316Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 6044..6316 -
1622931163.950103-CDS-H-paniculata_contig9356:6723..68051622931163.950103-CDS-H-paniculata_contig9356:6723..6805Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 6724..6805 -
1691481619.1628966-CDS-H-paniculata_contig9356:6723..68051691481619.1628966-CDS-H-paniculata_contig9356:6723..6805Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 6724..6805 -
1622931163.9704885-CDS-H-paniculata_contig9356:7278..73551622931163.9704885-CDS-H-paniculata_contig9356:7278..7355Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 7279..7355 -
1691481619.1739285-CDS-H-paniculata_contig9356:7278..73551691481619.1739285-CDS-H-paniculata_contig9356:7278..7355Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 7279..7355 -
1622931163.9922025-CDS-H-paniculata_contig9356:7626..77731622931163.9922025-CDS-H-paniculata_contig9356:7626..7773Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 7627..7773 -
1691481619.1822937-CDS-H-paniculata_contig9356:7626..77731691481619.1822937-CDS-H-paniculata_contig9356:7626..7773Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 7627..7773 -
1622931164.0117354-CDS-H-paniculata_contig9356:8301..84241622931164.0117354-CDS-H-paniculata_contig9356:8301..8424Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 8302..8424 -
1691481619.1902905-CDS-H-paniculata_contig9356:8301..84241691481619.1902905-CDS-H-paniculata_contig9356:8301..8424Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 8302..8424 -
1622931164.0346146-CDS-H-paniculata_contig9356:9047..90741622931164.0346146-CDS-H-paniculata_contig9356:9047..9074Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 9048..9074 -
1691481619.1982312-CDS-H-paniculata_contig9356:9047..90741691481619.1982312-CDS-H-paniculata_contig9356:9047..9074Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9356 9048..9074 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9356.17131.1prot_H-paniculata_contig9356.17131.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9356 5062..9074 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9356.17131.1

>prot_H-paniculata_contig9356.17131.1 ID=prot_H-paniculata_contig9356.17131.1|Name=mRNA_H-paniculata_contig9356.17131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MTCAHDRSAERRVMEMSIHEKLQACREFRHKGNRFHEEGQYRRAALQYRQ
ALVYYDFCFTDKEEIQLELDETRQACLLNSAACFLRCDELGQVLDCCYQV
LQEEPDNVKALYRRAVVFRRRDCFREAAADLSKALAQRPNDVMLRKESAI
LKSKMAAYRERSKAMGEQIFGAGRVMAVSEEEISVSHPDLSPPDSLVDMS
TGAMPSTGLGGDYRVADGIGVEFRDGSITGDQEEGRRRHDLALPVYLDLS
GLEKMAGCAWPVEA*
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mRNA from alignment at H-paniculata_contig9356:4765..9145-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9356.17131.1 ID=mRNA_H-paniculata_contig9356.17131.1|Name=mRNA_H-paniculata_contig9356.17131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4381bp|location=Sequence derived from alignment at H-paniculata_contig9356:4765..9145- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGACCCTGATTTGGCTACGAAGCGACGAGAGGAGGAGGCTGCACGCTTG
AAAAGGTTCAGACAGAACAACATGACTTGCGCGCATGACCGTTCTGCGGT
AAGAGATCTCGGAACCGCTCTATCATATCTATCGAAGCGTATTCTAGGCT
TGTTTCGACCATATACTTATTCATCGTGATCTGATGTGACAGATGCACCG
CCCGTCGCAGCCTCTAACTCTTGATTTGTTTAGCTCATTGCATTATGTTT
GGTCCACCTTAGCTGCGCAAGACCACTGTCTAGAGCAGGATCCAAGTGCT
CTTGAATCTTGGACAATGGCATCTCTAAACGTAACACGGAGTGCTAATTT
CCAAGGCCGACTTCTGGTTGGTGCTGAACGTATTTTCGGCTCTCCACGGG
CCAGCCTCAGTTTGTTGTGGCTAGTACGTCGTAGCGCCGCGGAGCATGAC
CTTCAAACCCGAACTCGCTATGTAGCTCTTGTTTCTTCACGTTCCTCTGA
GTTAATTGCTTGACCTTGTCGCTGGTTCTATTGCTCTTGGTGTTATTCCT
CACTTCCTCTGTCCGTTGTGGTACGTCGTTCTACATGAGCGGGGCTTACG
AACTGCACCCAAGGTCGTTTTGTTGATCGACGTTTTAGAATAGGGATGTT
TCGATTTGGAGAAACGGCGAATATTCAGTCTTTTCGTTTCGTTGCAATGC
TGTTGGTATCTTCTCTTCCAGGAGAGGAGAGTGATGGAGATGTCGATTCA
CGAGAAATTGCAGGCTTGTCGTGAGTTCAGGCACAAAGGAAACCGGTTTC
ACGAAGAGGGACAGTACCGGAGAGCAGCACTACAGTACAGACAGGTACAG
TAGGTATAATCACAACAGCCACAACGAAGGTGTGATGTGTAGACAGGTAC
GTAGCAATGACAACTGCCACGGTGAATCATGGCGAAGTGATCATACAAGG
AGGAAATATCATTATATCTGTTACTTATCGGTCAAATGTTTCCGCTGATG
ATGGGGGAATGGCCAGCGTGAGTGCTTGGCTTGACAACGAGGATGTCAGG
CAGGGTCTCCAGGAAGTAAGACCCACAGCAGTCCATATATTTCCACCTGT
TCCCCCAACGACTCATATATCACATTTGCGCCTGCCTGCGACGGCGTTAT
GTGATCTCATGAACGGTACCTTCGCTGCAGGGATCTTTCAGCTATAGGCA
CGGTCACCTGTTAATCAAGCCTGTAGTGTGTCTCGAAACACCCTGCTGCC
CTACAGTGACCATACCAGCATGCTCGGTCAGAATCACATTTTGACACGCC
CGCGAATATGTTGACTGTTGCGCGCTTTTCTCTCTTGTTGGCTCCGCGGT
ATGTCGGACGACGTAAAACAAGGCGTTGGTGTACTATGACTTTTGCTTTA
CCGACAAGGAAGAAATACAGCTAGAGTTGGATGAGACAAGGCAGGCATGT
CTACTTAATTCAGCGGCTTGTTTCCTACGGTGTGATGAGCTCGGTCAGGT
CTTGGACTGCTGTTATCAGGTTTGCGACCCAAGTGATACATATGAACTTG
AATATTGCCGTTGTGTGTGCATGCCAGGCAGGCTGAGAATGACGAGGTTC
AAATGACAAATGGATTTTTTTTATGTTTTGTTCGATGTCGTAGTTTTAGA
AGATTGGTTGCTTTTGAAAAAAATTCGGAAAAGAATGGAAGGTCGGTTAA
GATTTGGATAGTGCTGGTCGTCTTATTAGCAAGCTAGTGATTTTCCGCTT
TATGTACGCTTCCTTGTTGCTGGGGTTTTGGAATACACAGGTACTCCAGG
AAGAGCCCGACAACGTGAAGGCCTTGTACCGGCGGGCTGTGGTCTTCCGA
CGGCGAGATTGCTTTCGGTTCGTGGGTCCGATGTCGTTTATTTTTACACC
TTGAAGCTGGATTAAGAGTACACGGGTTGAGAGTCGATCTTGTATGTATC
GTATCAAAACAGTAGACAAATTGAGCGTTCTGTATCGTGGGCGGAAACTT
GGATGTGCTCATAGAGTCAAGTTGGCCCTGCAATACATAATTTTGACGTG
CTGCAAGCTGCAGTCTGACATCGTTGATTTATTCCGATCAAGGCCTAAAT
CATTACTAAAATTCATATGTCGTTTTGAATGACTAGTTTTTACTCCTCGG
GTAGCGACGCATTTGGAATATTTACTGTGAAACCATTTGAAACAGTAATC
ACAATACAGCTGTCACACAGTAATGGATAATGACGCTACTGAGTTGTGCA
GTCACAAAGGTTCAAGCGGTTGTGCGTTGTCGATCCTTCCTCCGTTTATT
GTGGCCCTGTTCTTCCTTTTCTACGGTACATCGAACTCAGTGAGGCTGCT
GCTGACCTCAGCAAAGCTCTGGCGCAGAGACCGAACGACGTAATGCTGCG
GAAGGAGAGCGCCATACTGAAGGTAAGCATGGGAATGCTACTATGTGTTT
ATGCCGAGGCTTGGTCTCTCGACCAGACCCTTGCTGACTTTCCTATCGCT
TTGTTGTTTGGCTGTGGACTCTGTGTGATGCCACGACCTGAGCGAACCTT
GGGTTCCCCCTTGATTCACAGACCAGTACGTGTTTGCTCGTGTAAATGCC
ATTGTCAAGTTGTCCGTGTCATTGTCCGCAGAATGGAAAATCCGCCCCTA
CAAAGCGCAGCGTCCAAAGAAGCAGCACGTCGCACGCATGCGAGACAATC
AGATCATTTGTTAATTCAAGTTCGTAGGTTTTCCAATTCAATCAGCATTG
CGCTGATATATACACATCATGCCTCCTTCCGTCCCTTCCTCACGAATACA
CCGTTTGGGTTTGTATTTGTTGTGTTTAGAGTAAGATGGCCGCATACCGC
GAACGCAGCAAGGCCATGGGCGAACAGATTTTCGGCGCGGGGCGGGTGAT
GGCTGTTAGCGAGGAAGAGATCTCAGTCTCACACCCGGATTTATCGCCAC
CTGATTCTTTGGTCGACATGAGCACAGGGGCGATGCCATCGACGGGACTG
GGAGGAGATTACAGAGTGGCGGACGGCATCGGGGTGGAGTTTCGCGACGG
AAGCATAACGGGAGATCAGGAGGAAGGGCGGCGACGGCACGACTTAGCAT
TGGTGAGTTACATTTCCCTAAGTTTTTCTCCATATTTGACAAGGTGTTTT
TTTCATTGATCAACTTGTGTTGGCACTCTGCGTCTCTACAGTGGTTCGGT
ATCTATAGACGCATGTGCGTGCTTATTTGTCCTACAGGAAGTATGGCCTT
ATCACACCGCAGGATGGCCATACCGTGTGCATGTGTTTTTAGGGCACCCA
GATGCATTCGCGTGCCCTGATTACCGGGATTATCGTCCTCGTGCATAACT
AGGTCATTTAGGTGGTGGGCGCTTCCATTTCTCAATAAAGCGTTTGATTG
TTCCATAGATTTTGCTTGGTTTGGTAATAGTTTTGAACCATCTCACAAGT
TTTGGGGTCCTTCTCTGATACGTAAGTCTTCCAGATTCCACTCCTTGCGT
GTAGACACTGTCCATGCGGGTGGGATAGAATTCATTTCGGGGATGCTGTG
CGTTGGTCTCTTGGTCATTCATTGTGGAGTCAACTACAGTGTGAAACGTG
AGAGGCCGGACGAAGTTGGTTTCGTTTTGTTGTCAAACTTGACGGAGAGA
TGGATGCCACACAGATATCGGCACTAACCTGGGAGATGTCGGTGTGTATG
TGGATGAGACGTGGTGTCATCGACAGGGGAAGCAGCATTTTGTTCACGAA
CAGCACTTCCGACCAAGCGGAATTAAATCCCTCACAACTAGTCCTACTAC
TGGCAAGCTAGTGCCACTTGTGTGCCGCTTTGGCCCCCTAAATACTTTTA
CCTAAACGGTATCTCCCGTACCTACGAACTGATTCCACGCTCACCTGTGG
ACATTCAGGAAAGTACCACCAAATACTAGACTGAGTGACATTCACTTTTT
GTTAGCATATTTTTTAACCACTGCTTCCCCCCCCCCCGCCCCCAACCCCC
CTGTGCTATTCACACTAGCCTGTGTATCTCGATTTGTCAGGCTTGGAAAA
AATGGCGGGTTGCGCATGGCCGGTCGAGGCCTAGATGACACTCCAGGAAC
CAAAAGCTGGGGAGGAACATGTTTATTTTTTAGTTGGACGCAGGGTCCGC
TATCGCGCTGGGATGAAACTAGTAGCCACCATGCGCGTGCGCTGTAGTTT
TACGACCGCTAAAAGAAGGCGCTACTATGGCATCGTGTAATATGAGATGG
GGCAAATCTATATTTCAGTCGTCTACGTGAGCATGCCGCAAATTCCATGT
GTTTCATTTCTTTATTTTACGTCTCCTAAGAACACCGTGCATTCACGAGA
TCCTGACTATCGAGAGGAGCTCCTGCGACAC
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Coding sequence (CDS) from alignment at H-paniculata_contig9356:4765..9145-

>mRNA_H-paniculata_contig9356.17131.1 ID=mRNA_H-paniculata_contig9356.17131.1|Name=mRNA_H-paniculata_contig9356.17131.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1590bp|location=Sequence derived from alignment at H-paniculata_contig9356:4765..9145- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTTGCGCGCATGACCGTTCTGCGATGACTTGCGCGCATGACCGTTC
TGCGGAGAGGAGAGTGATGGAGATGTCGATTCACGAGAAATTGCAGGCTT
GTCGTGAGTTCAGGCACAAAGGAAACCGGTTTCACGAAGAGGGACAGTAC
CGGAGAGCAGCACTACAGTACAGACAGGAGAGGAGAGTGATGGAGATGTC
GATTCACGAGAAATTGCAGGCTTGTCGTGAGTTCAGGCACAAAGGAAACC
GGTTTCACGAAGAGGGACAGTACCGGAGAGCAGCACTACAGTACAGACAG
GCGTTGGTGTACTATGACTTTTGCTTTACCGACAAGGAAGAAATACAGCT
AGAGTTGGATGAGACAAGGCAGGCATGTCTACTTAATTCAGCGGCTTGTT
TCCTACGGTGTGATGAGCTCGGTCAGGTCTTGGACTGCTGTTATCAGGCG
TTGGTGTACTATGACTTTTGCTTTACCGACAAGGAAGAAATACAGCTAGA
GTTGGATGAGACAAGGCAGGCATGTCTACTTAATTCAGCGGCTTGTTTCC
TACGGTGTGATGAGCTCGGTCAGGTCTTGGACTGCTGTTATCAGGTACTC
CAGGAAGAGCCCGACAACGTGAAGGCCTTGTACCGGCGGGCTGTGGTCTT
CCGACGGCGAGATTGCTTTCGGTACTCCAGGAAGAGCCCGACAACGTGAA
GGCCTTGTACCGGCGGGCTGTGGTCTTCCGACGGCGAGATTGCTTTCGTG
AGGCTGCTGCTGACCTCAGCAAAGCTCTGGCGCAGAGACCGAACGACGTA
ATGCTGCGGAAGGAGAGCGCCATACTGAAGTGAGGCTGCTGCTGACCTCA
GCAAAGCTCTGGCGCAGAGACCGAACGACGTAATGCTGCGGAAGGAGAGC
GCCATACTGAAGAGTAAGATGGCCGCATACCGCGAACGCAGCAAGGCCAT
GGGCGAACAGATTTTCGGCGCGGGGCGGGTGATGGCTGTTAGCGAGGAAG
AGATCTCAGTCTCACACCCGGATTTATCGCCACCTGATTCTTTGGTCGAC
ATGAGCACAGGGGCGATGCCATCGACGGGACTGGGAGGAGATTACAGAGT
GGCGGACGGCATCGGGGTGGAGTTTCGCGACGGAAGCATAACGGGAGATC
AGGAGGAAGGGCGGCGACGGCACGACTTAGCATTGAGTAAGATGGCCGCA
TACCGCGAACGCAGCAAGGCCATGGGCGAACAGATTTTCGGCGCGGGGCG
GGTGATGGCTGTTAGCGAGGAAGAGATCTCAGTCTCACACCCGGATTTAT
CGCCACCTGATTCTTTGGTCGACATGAGCACAGGGGCGATGCCATCGACG
GGACTGGGAGGAGATTACAGAGTGGCGGACGGCATCGGGGTGGAGTTTCG
CGACGGAAGCATAACGGGAGATCAGGAGGAAGGGCGGCGACGGCACGACT
TAGCATTGCCTGTGTATCTCGATTTGTCAGGCTTGGAAAAAATGGCGGGT
TGCGCATGGCCGGTCGAGGCCTAGCCTGTGTATCTCGATTTGTCAGGCTT
GGAAAAAATGGCGGGTTGCGCATGGCCGGTCGAGGCCTAG
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