mRNA_H-paniculata_contig9329.17109.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9329.17109.1
Unique NamemRNA_H-paniculata_contig9329.17109.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: D8LM29_ECTSI (N-acyl-aliphatic-L-amino acid amidohydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM29_ECTSI)

HSP 1 Score: 715 bits (1845), Expect = 3.720e-253
Identity = 345/433 (79.68%), Postives = 381/433 (87.99%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAV-KDEATG-RIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNGGCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTESLSTE 1294
            VEAF++FLRIRSV+ EGP GAYA AA+W+ DYARD+ GLTS KTVEY  GKPVVL+EWPGS+P+LP VLLNSHYDVVP M EHW TDPFAAV KDEA G RI+GRGTQDMKCVCVQYL AI  L+ +GFQPTR+V LSFVPDEEIGG DGIS LL+SEEWKA+ PVGI LDEGLANPRNAFTVFYGERTPWWLLVKAEG TGHGSRFI+ TAV KLMAVCDKALAFRKEQED LGH GGC HA+AKKLGDVTTLNLTML+AGVA AGG +G GG   AT+H+RYALNV+PTEA AGFDVRIDPNTPTEDF+AR++ WC EEGVTWE ADWT+PL +HYLTS+DRD NPWWGVFLD M+  GVE+EPEIFPASTDSR++R+LGIPALGFSPMRNTPI+LHDHNE+I Q VF+DGI VYERLI ALAS E L TE
Sbjct:   12 VEAFREFLRIRSVSAEGPQGAYAEAAKWVSDYARDQAGLTSIKTVEYSAGKPVVLMEWPGSEPDLPCVLLNSHYDVVPAMPEHWHTDPFAAVMKDEAGGGRIYGRGTQDMKCVCVQYLVAIARLRRSGFQPTRTVHLSFVPDEEIGGADGISLLLASEEWKALGPVGIALDEGLANPRNAFTVFYGERTPWWLLVKAEGPTGHGSRFIKDTAVQKLMAVCDKALAFRKEQEDALGHTGGCSHARAKKLGDVTTLNLTMLKAGVAMAGGGDG-GGAEAATKHERYALNVIPTEARAGFDVRIDPNTPTEDFKARLAGWCKEEGVTWELADWTTPLHEHYLTSVDRDVNPWWGVFLDTMKDVGVEIEPEIFPASTDSRYLRELGIPALGFSPMRNTPILLHDHNEYIAQDVFMDGIEVYERLITALASAERLPTE 443          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A835Z8B4_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B4_9STRA)

HSP 1 Score: 559 bits (1441), Expect = 8.490e-192
Identity = 266/436 (61.01%), Postives = 323/436 (74.08%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNGGCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTESLSTEKRISG 1309
            V  F++FLRIRS++ EGP G Y  A  W+  Y  D + L S +TV   +GKP+++++WPGS+P LP V+LNSHYDVVP M+EHW  D FAA K E  GRI+GRG QDMKCVC+QYL AIR L    +QP R+V L+FVPDEE+GG +G+   L + ++ A+QP+GI LDEGLANP NA+TVFYGERTPWWLLVKAEG TGHGSRFIEGTA+ KL+ VC+KAL FR+ Q   LGH+GGC HA AK LGDVTTLNLTML+ GV   GG               Y+LNV+PTEA AGFDVRI   TP  +FRA +  WC  EGV+W FA WT+PL  HYLTSIDRD NPWWG+FLD M  GGV VEPEIFPA+TDSRF+R++G+ ALGFSPMR TP++LH+H+E++ + VFL+GI VYERL+ ALA    L TE    G
Sbjct:   10 VSRFREFLRIRSISGEGPKGVYQTAVDWLTRYVDDLLHL-SWETVSPCKGKPILIVKWPGSEPSLPSVVLNSHYDVVPAMQEHWTVDAFAAEKTEE-GRIYGRGAQDMKCVCIQYLEAIRRLIERRWQPRRTVYLTFVPDEELGGTEGMGVFLETPQFAALQPIGIALDEGLANPSNAYTVFYGERTPWWLLVKAEGPTGHGSRFIEGTAMAKLVDVCNKALEFRRAQRAELGHSGGCSHAAAKTLGDVTTLNLTMLRGGVTLDGGAT-------------YSLNVIPTEAQAGFDVRICARTPPSEFRALIDDWCRAEGVSWSFAPWTTPLHDHYLTSIDRDVNPWWGMFLDAMAHGGVPVEPEIFPAATDSRFLRRIGVAALGFSPMRRTPVLLHEHDEWLHEDVFLEGIDVYERLVEALAGAPRLRTEAAEGG 430          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A7S4LCU3_9EUGL (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LCU3_9EUGL)

HSP 1 Score: 512 bits (1318), Expect = 6.970e-173
Identity = 251/429 (58.51%), Postives = 317/429 (73.89%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPE--LPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNG-GCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTE 1279
            +  FQ+F+RI++++ EGP GAY  AA W+  + +  +GL   + V  V GKPV+L  W G  PE  LP VLLNSHYDVVP M+EHW  DPF AV D+ TGRI+GRGTQDMKCVC+QYL AI+ L+  G+ P R+V L+FVPDEEIGG +G+   L S+ +K++  VG+ +DEGLANP NAFTVFYGERTPWW++VKA+G TGHGSRFI+ TA  KLM V +KALAFRKEQE  LG++G GC HA+AKKLGDVTT+NLTML+AGV + GG               +ALNV+PTEA AGFD+R+ P+    D +AR+++W   EGV+W++A WT+PL +H+LTS DR +N WWGV  D +   G  +E EIFPA TDSRFIR LG+PA GFSPM NTPI+LH+HNE+ID+ VFL+G+ VY  LI AL S E
Sbjct:   49 IAMFQEFIRIKTISFEGPKGAYREAADWLTGHCK-AMGL-GVREVSPVPGKPVLLATWEGQVPEKDLPSVLLNSHYDVVPCMREHWDCDPFEAVWDKTTGRIYGRGTQDMKCVCIQYLLAIKRLQHKGYTPRRTVHLTFVPDEEIGGAEGMLEFLKSDLYKSLN-VGVGMDEGLANPDNAFTVFYGERTPWWVIVKAQGPTGHGSRFIKDTAPMKLMNVANKALAFRKEQEHELGYSGEGCTHAQAKKLGDVTTVNLTMLEAGVTSDGGHT-------------FALNVIPTEARAGFDIRVSPSMDPADMQARLTEWTEAEGVSWDYAHWTTPLLKHHLTSTDRTKNAWWGVLEDAVTAAGFTLELEIFPAGTDSRFIRALGVPAFGFSPMANTPILLHEHNEYIDEGVFLEGVDVYVTLIEALGSFE 461          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A813KZF2_POLGL (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KZF2_POLGL)

HSP 1 Score: 508 bits (1309), Expect = 4.080e-172
Identity = 258/436 (59.17%), Postives = 322/436 (73.85%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPN-GAYAAAAQWIVDYARD-EVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAA-VKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNG-GCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEE-GVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTESLSTE 1294
            VE F++FL+IRSV+ EGP+ G+YA A  W+  YA+    GLT+ +T+E V+GKPV+L  W G +  LP +LLNSHYDVVP M + W  DP+AA VKD   GRI+GRGTQDMKCVCVQYL AI+ L+  GF P R++ +SFVPDEEIGG DG+ +LL S E+K + P+ +VLDEGLA+P NAFTVFYGERTPWW+LV+A G TGHGSRFI+ TA  KL+ + ++AL+FRK QE+ LGH+  GC H  AKKLGDVTT+NLTML+ GV T  GE              +ALNV+P EA AGFDVRI P+   +DF A + KWC EE G+TW+FA WT PL +H+ T++D D NPWW  F D++   GV+VEPE+FPA+TDSRFIRQLGIPALGFSPMRN PI+LH+H+E+I   VF+ GI VY  LIA LA    L +E
Sbjct:    9 VECFREFLKIRSVSGEGPSSGSYAQAVAWL-QYAQCLRAGLTT-RTLEPVKGKPVLLATWLGKEEHLPALLLNSHYDVVPAMADCWTVDPWAAEVKD---GRIYGRGTQDMKCVCVQYLVAIQRLRAKGFVPQRTLHMSFVPDEEIGGADGMGKLLDSAEFKELGPIALVLDEGLASPSNAFTVFYGERTPWWILVRATGPTGHGSRFIKDTAPQKLLRMAERALSFRKAQEEDLGHDAHGCKHGSAKKLGDVTTVNLTMLRCGVTTDNGET-------------FALNVIPNEAEAGFDVRITPHLKPKDFSALLDKWCQEEEGITWQFAPWTRPLHEHFTTAVD-DSNPWWVAFRDIVVGMGVQVEPEVFPAATDSRFIRQLGIPALGFSPMRNCPILLHEHDEYIPIDVFMSGIDVYVTLIAGLADHPQLPSE 425          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A812MHX2_SYMMI (N-acyl-aliphatic-L-amino acid amidohydrolase n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812MHX2_SYMMI)

HSP 1 Score: 488 bits (1257), Expect = 3.400e-164
Identity = 245/432 (56.71%), Postives = 308/432 (71.30%), Query Frame = 2
Query:    5 EAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGH-NGGCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHE-EGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTESLSTE 1294
            E F+DFLRIRSV+ EGP G+YA A  W+    R  +GLT+ K VE V+GKP++L  W GS   LP +LLNSHYDVVP M E W+ DP+AA  +   GRI+GRGTQDMK VCVQYL AI  L+  GF P R++ LSFVPDEEIGG++G+  LL + E+ A+  +G+ LDEGL+NP +AFTVFYGERTPWWLLV+A G TGHGSRFI+ TA  KL+   ++ALAFRK QED LGH + GC H  AKKLGDVTT+NLTML+ GV+    +NG          K + LNV+PTEA AGFDVRI P+   +DF+  + +WC E EG+TW+ A WT    +H+ T+ D + NPWW  F D M     ++EPE+FPA+TDSRF+R+LGIPALGFSPMR  PI+LH+H+E++   VF+ GI VY  LI ALAS + L  E
Sbjct:   10 ELFRDFLRIRSVSGEGPQGSYAEAVAWLTAQCR-RLGLTT-KQVEPVKGKPILLATWAGSDDSLPCLLLNSHYDVVPAMTECWSVDPWAA--EVVDGRIYGRGTQDMKSVCVQYLFAIERLRKRGFVPLRTIHLSFVPDEEIGGVEGMGELLKTPEFNALGEIGLALDEGLSNPGDAFTVFYGERTPWWLLVRATGPTGHGSRFIKNTAPQKLLRFAERALAFRKAQEDSLGHGSNGCKHGTAKKLGDVTTVNLTMLRCGVSN---DNG----------KTFCLNVIPTEAEAGFDVRITPDLKPKDFKNLLDQWCKEDEGITWQIAPWTRAFQEHHTTATD-ESNPWWVAFRDAMSSMSFDIEPEVFPAATDSRFLRELGIPALGFSPMRRCPILLHEHDEYLPVDVFMSGIDVYVGLIDALASKQKLQGE 423          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A1Q9CTU4_SYMMI (N-acyl-aliphatic-L-amino acid amidohydrolase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9CTU4_SYMMI)

HSP 1 Score: 488 bits (1257), Expect = 1.160e-162
Identity = 245/432 (56.71%), Postives = 308/432 (71.30%), Query Frame = 2
Query:    5 EAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGH-NGGCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHE-EGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTESLSTE 1294
            E F+DFLRIRSV+ EGP G+YA A  W+    R  +GLT+ K VE V+GKP++L  W GS   LP +LLNSHYDVVP M E W+ DP+AA  +   GRI+GRGTQDMK VCVQYL AI  L+  GF P R++ LSFVPDEEIGG++G+  LL + E+ A+  +G+ LDEGL+NP +AFTVFYGERTPWWLLV+A G TGHGSRFI+ TA  KL+   ++ALAFRK QED LGH + GC H  AKKLGDVTT+NLTML+ GV+    +NG          K + LNV+PTEA AGFDVRI P+   +DF+  + +WC E EG+TW+ A WT    +H+ T+ D + NPWW  F D M     ++EPE+FPA+TDSRF+R+LGIPALGFSPMR  PI+LH+H+E++   VF+ GI VY  LI ALAS + L  E
Sbjct:   10 ELFRDFLRIRSVSGEGPQGSYAEAVAWLTAQCR-RLGLTT-KQVEPVKGKPILLATWAGSDDSLPCLLLNSHYDVVPAMTECWSVDPWAA--EVVDGRIYGRGTQDMKSVCVQYLFAIERLRKRGFVPLRTIHLSFVPDEEIGGVEGMGELLKTPEFNALGEIGLALDEGLSNPGDAFTVFYGERTPWWLLVRATGPTGHGSRFIKNTAPQKLLRFAERALAFRKAQEDSLGHGSNGCKHGTAKKLGDVTTVNLTMLRCGVSN---DNG----------KTFCLNVIPTEAEAGFDVRITPDLKPKDFKNLLDQWCKEDEGITWQIAPWTRAFQEHHTTATD-ESNPWWVAFRDAMSSMSFDIEPEVFPAATDSRFLRELGIPALGFSPMRRCPILLHEHDEYLPVDVFMSGIDVYVGLIDALASKQKLQGE 423          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: K3X9N2_GLOUD (M20_dimer domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9N2_GLOUD)

HSP 1 Score: 478 bits (1230), Expect = 1.730e-160
Identity = 232/424 (54.72%), Postives = 294/424 (69.34%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNGGCGHA--KAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAAL 1267
            V  F +FLR R+++ EGP+G+Y   A W+ DY  +E+GLT  K    ++ KPVVL  W G  P LP ++LNSHYDVVPVM+EHW  DPF A K    GRI+GRGTQDMK VC+QY  A+  LK +GF P R++ L +VPDEEIGG  G+   L  EE++A+QP+    DEGLANP NAFTVFYGER PWW  V AEG TGHGSRFI+ TA  K++ +C+KALAFR+EQE+ L  + GC H   K +KLGDVTT+N+T LQ+GV+T GG             K +ALNV+PT A AGFDVRI PN    +F+A +  WC  EGV+WEF  WT+PL +HY T +D D+N WW +F    EK GV +E E+FPA+TDSRF+R++GIPALGFSPM NT I+LH+HNE + +  FL G+ VY  +   L
Sbjct:    8 VTRFLEFLRFRTISGEGPHGSYQECANWLRDYM-EEIGLT-VKVFSPIENKPVVLATWAGEDPSLPGIILNSHYDVVPVMREHWQYDPFDA-KVLEDGRIYGRGTQDMKSVCIQYAEAVYRLKSSGFTPKRNIYLLYVPDEEIGGAQGMEEFLLHEEFQAIQPIAFAFDEGLANPSNAFTVFYGERVPWWFYVTAEGPTGHGSRFIKNTATSKIIDICNKALAFREEQENKLSADPGCKHGDMKKRKLGDVTTVNITALQSGVSTDGG-------------KTHALNVIPTTAIAGFDVRISPNLDMAEFKAMLDTWCAAEGVSWEFTSWTNPLHEHYTTKLD-DDNVWWVLFKKSCEKLGVPLETEVFPAATDSRFLRKVGIPALGFSPMSNTEILLHEHNESLQKDTFLKGVDVYATIFQDL 414          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A6G0XVE6_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVE6_9STRA)

HSP 1 Score: 471 bits (1212), Expect = 9.270e-158
Identity = 226/424 (53.30%), Postives = 298/424 (70.28%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNGGCGHAKAKK--LGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAAL 1267
            V+ FQ+ +RI +V+  GP GAY   A+W++ Y  +   L   +     +GKP+++  W G  P LP +LLNSHYDVVPVM+E W  DPF     E  G I GRG QDMKCVCVQYL A+R+L   GFQP R++ LSFVPDEEIGG+DG+   L S +++A+QP+ + LDEGLA+P   FTVFYGERTPWWL VKAEG TGHGSRFIE TA GKL+ +C+K L FR+EQE +LG + GC H + KK  LGD+TT+NLTML+AGV+T GG               YALNV+PTEA AGFD+R+ P+   ++F+A++ +WC  EGVTWEFA  T  L +H++TS D++ NP    FL+     G+EVE E+FPA+TDSRF+R+LG+PALGFSPM NT ++LH+HNE + +  FL GI++++ +   L
Sbjct:    9 VQRFQELIRIPTVSGYGPQGAYQECAKWLLAYYEELGFLEDIEEFSVAEGKPILVATWRGKDPTLPSILLNSHYDVVPVMRESWNYDPFGGELLE-NGMIVGRGAQDMKCVCVQYLEALRLLHATGFQPARNIHLSFVPDEEIGGVDGMDAFLKSRQFQAMQPIALALDEGLASPTEKFTVFYGERTPWWLYVKAEGPTGHGSRFIENTATGKLIEICNKFLKFREEQEKLLGASCGCKHGEMKKRNLGDITTINLTMLRAGVSTDGGAT-------------YALNVIPTEATAGFDIRVSPSQDLDEFKAKLDEWCAIEGVTWEFASKTV-LREHHVTSTDKETNPHCAKFLEAAAALGMEVELEVFPAATDSRFLRKLGVPALGFSPMNNTEVLLHEHNEMLHKDTFLKGIQLFKGIFQEL 417          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A1V9ZTU8_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTU8_9STRA)

HSP 1 Score: 468 bits (1204), Expect = 1.390e-156
Identity = 230/425 (54.12%), Postives = 295/425 (69.41%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAA-VKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNGGCGHA--KAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAAL 1267
            +  FQ+ LRI +++  GP GAY   A W+VDY    VGLT+      V GKP+VL  W G  P LP VLLNSHYDVVPVM E W  DPF A + D   G I  RGTQDMK VC+QY+ A+R+LK +GF P R++ + FVPDEEIGG+DG+   L S E+KA+QP+ I LDEGLANP N FTVFYGERTPWW+ VKA G TGHGSRFIE TA  KL+A+C+KALAFR EQE  LG + GC H   K KKLGDVTT+NLTML++GV+  GG +             YALNV+PTEA AGFD+RI PNT   +F+  +++WC  +GV+W +     PL +H++T++D   NP    FL+  ++ G+E++ ++FPA+TDSRF+RQLG+PALGFSPM NT ++LH+HNE + +  F+ GI VY  +   L
Sbjct:   10 IRHFQELLRIPTISGSGPKGAYDKCASWLVDYLAG-VGLTA-HVFSPVAGKPIVLATWAGKDPTLPGVLLNSHYDVVPVMAESWKYDPFGAEILDN--GMIVARGTQDMKSVCIQYVEAVRLLKESGFVPARNIHICFVPDEEIGGVDGMGEFLKSAEYKAIQPLAIALDEGLANPTNKFTVFYGERTPWWIYVKATGPTGHGSRFIENTATSKLIAICNKALAFRAEQEKALGASCGCKHGDMKKKKLGDVTTINLTMLKSGVSMDGGAS-------------YALNVIPTEATAGFDIRISPNTDLTEFQNMLNEWCEADGVSWSYM--VKPLHEHHVTAVDEATNPLCHKFLETCKELGMEIDLDVFPAATDSRFLRQLGVPALGFSPMNNTEVLLHEHNEMLHKDTFVKGIYVYRDIFTRL 415          
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Match: A0A024UJ27_9STRA (N-acyl-aliphatic-L-amino acid amidohydrolase n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJ27_9STRA)

HSP 1 Score: 467 bits (1202), Expect = 3.660e-156
Identity = 224/424 (52.83%), Postives = 294/424 (69.34%), Query Frame = 2
Query:    2 VEAFQDFLRIRSVTEEGPNGAYAAAAQWIVDYARDEVGLTSCKTVEYVQGKPVVLIEWPGSQPELPRVLLNSHYDVVPVMKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQPTRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAFTVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQEDILGHNGGCGHAKAKK--LGDVTTLNLTMLQAGVATAGGENGAGGGGTATRHKRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWTSPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQLGIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAAL 1267
            +  FQDFLRI +V+ +GP GAY   A W+  Y  +   L   +    ++GKP+V+  W G  P LP +LLNSHYDVVPVM++ W  +PF     E  G I GRG QDMK VC+QYL A+R+L   GF P R++ LS+VPDEEIGG DG+   L S++++++ P+ + LDEGLANP N FTVFYGERTPWWL V+AEG TGHGSRFI+ TA  KL+ +C+KAL FR+EQE +LG   GC H + KK  LGDVTT+NLT+L++GV T GG             K YALNV+PTEA AGFD+R+ PN    +F+A + +WC  EGV+WEF    +PL QH++TS++ + NP    FL V EK G+EVE E+FPA+TDSRF+RQLG+PALGFSPM NT ++LH+HNE + +  F+ GI +Y+ +   L
Sbjct:   14 IRRFQDFLRIPTVSGQGPKGAYQDCAVWLTAYMTELGFLEDIQVFSPIEGKPIVVATWKGKDPTLPSILLNSHYDVVPVMEQFWNYEPFGGELLE-NGMIVGRGAQDMKSVCIQYLEALRLLHATGFVPARNIHLSYVPDEEIGGSDGMGEFLKSKQYQSMLPIALALDEGLANPTNKFTVFYGERTPWWLYVRAEGLTGHGSRFIQDTATIKLIDICNKALKFREEQEKLLGTTCGCKHGEMKKRNLGDVTTVNLTVLRSGVTTDGG-------------KTYALNVIPTEAMAGFDIRVSPNQDLVEFKAMLDEWCSAEGVSWEFVT-KNPLHQHHVTSVEEETNPLCAKFLSVAEKLGMEVELEVFPAATDSRFLRQLGVPALGFSPMNNTEVLLHEHNEMLHKDTFVKGIHLYKGIFEHL 422          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9329.17109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM29_ECTSI3.720e-25379.68N-acyl-aliphatic-L-amino acid amidohydrolase n=2 T... [more]
A0A835Z8B4_9STRA8.490e-19261.01N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A7S4LCU3_9EUGL6.970e-17358.51N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A813KZF2_POLGL4.080e-17259.17N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A812MHX2_SYMMI3.400e-16456.71N-acyl-aliphatic-L-amino acid amidohydrolase n=4 T... [more]
A0A1Q9CTU4_SYMMI1.160e-16256.71N-acyl-aliphatic-L-amino acid amidohydrolase n=2 T... [more]
K3X9N2_GLOUD1.730e-16054.72M20_dimer domain-containing protein n=1 Tax=Globis... [more]
A0A6G0XVE6_9STRA9.270e-15853.30N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A1V9ZTU8_9STRA1.390e-15654.12N-acyl-aliphatic-L-amino acid amidohydrolase n=1 T... [more]
A0A024UJ27_9STRA3.660e-15652.83N-acyl-aliphatic-L-amino acid amidohydrolase n=3 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9329contigH-paniculata_contig9329:4324..8323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score589.7
Seed ortholog evalue9e-166
Seed eggNOG ortholog2880.D8LM29
Preferred nameACY1
KEGG rclassRC00064,RC00300
KEGG koko:K01436,ko:K14677
KEGG ReactionR00669,R10553
KEGG Pathwayko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00028
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004046,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006805,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009410,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019538,GO:0030163,GO:0031982,GO:0042221,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043230,GO:0044237,GO:0044238,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0070062,GO:0070887,GO:0071466,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1903561
EggNOG free text desc.aminoacylase activity
EggNOG OGsCOG0624@1,KOG2275@2759
Ec32 ortholog descriptionPeptidase M20, dimerisation domain
Ec32 orthologEc-14_002670.1
EC3.5.1.14
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko04147
Exons2
Model size2115
Cds size1077
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9329.17109.1prot_H-paniculata_contig9329.17109.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9329 4562..7523 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931161.344005-UTR-H-paniculata_contig9329:4323..45611622931161.344005-UTR-H-paniculata_contig9329:4323..4561Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9329 4324..4561 +
1691481618.1014645-UTR-H-paniculata_contig9329:4323..45611691481618.1014645-UTR-H-paniculata_contig9329:4323..4561Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9329 4324..4561 +
1622931161.4094274-UTR-H-paniculata_contig9329:7523..83231622931161.4094274-UTR-H-paniculata_contig9329:7523..8323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9329 7524..8323 +
1691481618.1380687-UTR-H-paniculata_contig9329:7523..83231691481618.1380687-UTR-H-paniculata_contig9329:7523..8323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9329 7524..8323 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931161.3657615-CDS-H-paniculata_contig9329:4561..53801622931161.3657615-CDS-H-paniculata_contig9329:4561..5380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9329 4562..5380 +
1691481618.1166017-CDS-H-paniculata_contig9329:4561..53801691481618.1166017-CDS-H-paniculata_contig9329:4561..5380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9329 4562..5380 +
1622931161.3867838-CDS-H-paniculata_contig9329:7265..75231622931161.3867838-CDS-H-paniculata_contig9329:7265..7523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9329 7266..7523 +
1691481618.1281352-CDS-H-paniculata_contig9329:7265..75231691481618.1281352-CDS-H-paniculata_contig9329:7265..7523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9329 7266..7523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9329.17109.1

>prot_H-paniculata_contig9329.17109.1 ID=prot_H-paniculata_contig9329.17109.1|Name=mRNA_H-paniculata_contig9329.17109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=359bp
MKEHWATDPFAAVKDEATGRIFGRGTQDMKCVCVQYLAAIRMLKLAGFQP
TRSVILSFVPDEEIGGMDGISRLLSSEEWKAVQPVGIVLDEGLANPRNAF
TVFYGERTPWWLLVKAEGATGHGSRFIEGTAVGKLMAVCDKALAFRKEQE
DILGHNGGCGHAKAKKLGDVTTLNLTMLQAGVATAGGENGAGGGGTATRH
KRYALNVVPTEAHAGFDVRIDPNTPTEDFRARVSKWCHEEGVTWEFADWT
SPLDQHYLTSIDRDENPWWGVFLDVMEKGGVEVEPEIFPASTDSRFIRQL
GIPALGFSPMRNTPIMLHDHNEFIDQRVFLDGIRVYERLIAALASTESLS
TEKRISGL*
back to top

mRNA from alignment at H-paniculata_contig9329:4324..8323+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9329.17109.1 ID=mRNA_H-paniculata_contig9329.17109.1|Name=mRNA_H-paniculata_contig9329.17109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4000bp|location=Sequence derived from alignment at H-paniculata_contig9329:4324..8323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGGAAGCCTTCCAGGATTTCTTGCGCATACGCTCTGTAACCGAGGAGG GTCCCAACGGCGCGTACGCGGCAGCAGCGCAGTGGATCGTAGACTACGCT CGGGACGAGGTAGGACTAACATCATGCAAAACTGTGGAGTACGTGCAGGG GAAACCCGTCGTCCTCATAGAGTGGCCGGGCTCGCAGCCCGAGCTGCCAC GCGTGCTACTCAACTCCCACTACGACGTGGTGCCGGTGATGAAGGAACAC TGGGCAACGGACCCCTTCGCAGCAGTGAAGGACGAAGCAACCGGGCGCAT CTTCGGCCGTGGCACGCAGGACATGAAGTGCGTCTGCGTGCAGTACCTCG CCGCGATCCGAATGCTGAAGCTAGCGGGTTTCCAGCCCACTCGCTCCGTG ATCCTGAGTTTCGTGCCGGACGAGGAGATCGGCGGGATGGACGGCATAAG CCGCCTGCTGTCGTCGGAGGAGTGGAAGGCGGTGCAGCCGGTGGGCATAG TCCTGGACGAGGGGCTGGCTAACCCGAGGAACGCCTTCACCGTGTTCTAC GGCGAGAGGACGCCATGGTGGCTGCTGGTCAAAGCAGAGGGCGCCACCGG GCACGGTAGCCGGTTCATCGAGGGCACCGCGGTGGGGAAGCTCATGGCGG TATGCGATAAGGCGCTGGCGTTTCGAAAAGAACAGGAGGATATCTTGGGG CACAACGGCGGCTGCGGGCATGCGAAGGCCAAGAAACTCGGTGACGTCAC GACGCTTAACCTCACGATGCTACAGGCTGGCGTCGCCACGGCCGGTGGTG AGAATGGTGCGGGCGGGGGGGGCACTGCTACCAGGCATAAGCGGTACGCG CTGAACGTTGTACCGACGGAGGCTCACGCTGGGTTCGACGTGAGGATAGA TCCGAACACGCCCACCGAGGATTTCCGAGCCCGCGTGTCGAAGTGGTGTC ATGAGGAGGGCGTTACGTGGGAGTTTGCCGACTGGACCTCGCCCCTGGAT CAGCATTACCTCACCTCGATAGATCGGGATGAAAATCCGTGGTGGGGTGT ATTCCTGGTGAGGATGTGGTCAGTCAGTGTGCACATGTAGTTCTTCGTTG TTATAATTAAATACCGCTTCTTCTTATGATGACAACAACGAACAACTGGA CAGTTTGACCCGGTAGTGTGCTTTCGTGTGTATAATGAATTATATATGAA ATTTTGTTTGAAGAAAAGTTGAGGGCGAAAGTAACCGCACTTTTCATCTG TTGTAAGGCTACTTGCAGATTGTCGCGAATTTCATGGACGATGACGATAG CTACGATGCTGGTGCTGCTCACACCTCGAAGCACGCTTCGCGGAAGCACC GATGACAGCATGTTTGACACTATGAATGCCCTGCCTCCGCCAAAGCCCCC CCCTTGGAGCGAAAAAATAGTCCTCGTACCTTTGCCACCTTGTATCAAAA TCATTTCTGACTTGTTGGATTTCCGGGCTCTACTCGTGGTCGATGCATCG AATTTTTGCGAGATTGTGTTTGACCTTGAACAAGAGGTGACCATTCTCTC TTTTTTTTCTACGAGAAAATCGGTATAATCACGACAACTGTCAAGCTGGT CTGATTAAAAAAAAAAAAAGCAACAAATATACCTACGAGCGAGCCGCGCC TTAGGCCATAACGCGGCACACCTTTTGAGATATTTGAAGTATGTACTGTG GGAGGAATTGTAGATAATAGTCGAGTAGAGAAGTGTTTTACCATATGAAT TGACCGTTTGGTAAAATAGTTAAGTATGGAAGCATCGGTAAAAGTTTTTG CCTCAGCCTTCCGGGGGTTAAAAAAAAAAAATGAACTGACCGTGTGTGAA CCAAGCTGCGCGCAAGGGGTGAAAATAGTGGCATTCAGGAAAAGTATGGT TTCCTCGATGACCAAAGAGTGAGAGTTAGCATTGAAGAAGAGAGAGAAAG AGAGATAAGTGTGCTTCCTTTCCTCGCCGAAATAGAAGCGCCGTCTGAGC TTGACTTTCGTTTTTTTACGAGCAGATCGATATCATATACTGACATGAAA ACACGGAGCATGCTGAGCTGGAGATGCACGCCAGAAACAAATTCGACTTT GCAACACCGCCAGCGGTGTAGATAGATGGGTTGTGTGTATGATACTCTGC CCATCCTTATGCAAAATATGTGCCACACGCAGTCACCCGCCGACCTAACC TTAGGATGATAGCATGTTTTCCGTTATCGCAGCATGCGAAATCTTCCGAA GTTGGCGGGATGAAAAACAGCAGCTACCCGCCAGAAAAGCCCAGTTTTGG GATTTTCCAACAAAAAAAATGGGAATTACAGTGCTTTTCACTTTTTTGTT GCTGTGAAACATGATCGACGTACTGGTTGGCTCACTGACTCGTGGGTCAA AACAGCAGCCAAAGCCTTTCTTTTTTTAACTCCCGGAAGGCTGAGGCAAA AACCTTTACCGATGCTTCCATACTCCAGTATTTTACCAATGTCTACATTT TCTTTAACAGAATAGAGTTATTTATTCCTCTGCGGGGTAGGCGCCACCCC GGTTCGGCCGACCGCAGCCAAAGCCTTGGCCCAAATTTACCCCTCATCGA ATTACACACATACATCGTACTCCACACACAACATGGCTTGCGTGGTGTGA CTGCTCAGGTGAAAACGTAATTCCCTAATATGAAAAAGGTTGCCCTGGCG AAGATAGCAACAAGCAAATACTGTTCTCCCTACTCGAGAATCCCTCGAGA TCTCGCCGCACACGCCGTCTTTTCCCCTTTTTTTTAACCCCCGGAAGGCT AAGGCAAAAACATTTATCCGATGCTTCCATACACAAGCCGTGTTTGCGCA GGCCACATCCTGTATTGTACACCAACGACTGTTGACTTTTTTTCGGCTAC AACTTGTACTCCTCTTCCCAAATGTTGACGATGCTGATGCAGGACGTCAT GGAGAAAGGTGGCGTAGAGGTGGAGCCCGAGATATTTCCAGCGAGCACTG ATAGCCGGTTTATCCGACAGCTGGGCATCCCCGCCCTGGGCTTCTCGCCC ATGCGGAACACACCCATCATGCTGCACGACCATAACGAGTTTATCGATCA GAGAGTGTTTCTGGACGGAATCCGAGTGTACGAGCGTCTCATCGCAGCTT TGGCGTCAACGGAAAGCCTTAGTACGGAGAAGCGAATCTCGGGATTATAG AGCGTGGGAAGACGCTCGTAGGAAACGGCGCAGCGCAGCTAAAATGTCTT GTGCTTCGCGTAGACGCCCCCCGTAAAGATATTTAAGTTCTCAAGTAATG ACACTTGGCGGACAGCTTGGGGTAAAAAGCGTTGACTCATCACGAAAGGG CCTGCTGTGTGAGGATTAGAGATTGTGTGTGTTCGTAAACACCCATTTCG ATGTGTTCACAGCACAGCGACTGTTTCGGGATATCAAGATCATGAGCACC GTTCAGGCACACTATCTCAATTACGGCCGGCCAACTGAGAGGCACTGTTG TTTCAGCAAGCTACAGCATATTATCTTTCTTCCAGGGAAGGTCTCGATGA ACACTGGTTCTTAGGGTAATAGGTTGTGCATGAGGACAATTAACACTCTG TAGGAGATTTTTTGTCTCTTCCTACACAAAGATGTCAACGGCTCCAGGAT TTGGGAACCCAATATAGGATGACGGATCAAGGACAGGGATATAGATGTCG CTGTGTAACCAGTGTAAAACTTGCTCTCCACATAGACGTGTCCTACGTTG AACAGCTGGCGAGCGTGCGGACCCTGGAATTAAACAGATTGTATTGATTA ATTGGCCACGCACATCTTACCATGTATACATTTAGGAAGCAGAACCTTGT TGGGGTATCACCTTTTTTATAATCAACACAAAACTGATCAAACATCTGAC TAAAATCGAAGGTTTTTTAGTTAAGGGGGACATGAGATATACCTCCACGT CATTCTCCACAACTTCGGGTCAAACACGTATAACGTCACTTGTGTAGTTT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig9329:4324..8323+

>mRNA_H-paniculata_contig9329.17109.1 ID=mRNA_H-paniculata_contig9329.17109.1|Name=mRNA_H-paniculata_contig9329.17109.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at H-paniculata_contig9329:4324..8323+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGGAACACTGGGCAACGGACCCCTTCGCAGCAGTGAAGGACGAAGC
AACCGGGCGCATCTTCGGCCGTGGCACGCAGGACATGAAGTGCGTCTGCG
TGCAGTACCTCGCCGCGATCCGAATGCTGAAGCTAGCGGGTTTCCAGCCC
ACTCGCTCCGTGATCCTGAGTTTCGTGCCGGACGAGGAGATCGGCGGGAT
GGACGGCATAAGCCGCCTGCTGTCGTCGGAGGAGTGGAAGGCGGTGCAGC
CGGTGGGCATAGTCCTGGACGAGGGGCTGGCTAACCCGAGGAACGCCTTC
ACCGTGTTCTACGGCGAGAGGACGCCATGGTGGCTGCTGGTCAAAGCAGA
GGGCGCCACCGGGCACGGTAGCCGGTTCATCGAGGGCACCGCGGTGGGGA
AGCTCATGGCGGTATGCGATAAGGCGCTGGCGTTTCGAAAAGAACAGGAG
GATATCTTGGGGCACAACGGCGGCTGCGGGCATGCGAAGGCCAAGAAACT
CGGTGACGTCACGACGCTTAACCTCACGATGCTACAGGCTGGCGTCGCCA
CGGCCGGTGGTGAGAATGGTGCGGGCGGGGGGGGCACTGCTACCAGGCAT
AAGCGGTACGCGCTGAACGTTGTACCGACGGAGGCTCACGCTGGGTTCGA
CGTGAGGATAGATCCGAACACGCCCACCGAGGATTTCCGAGCCCGCGTGT
CGAAGTGGTGTCATGAGGAGGGCGTTACGTGGGAGTTTGCCGACTGGACC
TCGCCCCTGGATCAGCATTACCTCACCTCGATAGATCGGGATGAAAATCC
GTGGTGGGGTGTATTCCTGATGAAGGAACACTGGGCAACGGACCCCTTCG
CAGCAGTGAAGGACGAAGCAACCGGGCGCATCTTCGGCCGTGGCACGCAG
GACATGAAGTGCGTCTGCGTGCAGTACCTCGCCGCGATCCGAATGCTGAA
GCTAGCGGGTTTCCAGCCCACTCGCTCCGTGATCCTGAGTTTCGTGCCGG
ACGAGGAGATCGGCGGGATGGACGGCATAAGCCGCCTGCTGTCGTCGGAG
GAGTGGAAGGCGGTGCAGCCGGTGGGCATAGTCCTGGACGAGGGGCTGGC
TAACCCGAGGAACGCCTTCACCGTGTTCTACGGCGAGAGGACGCCATGGT
GGCTGCTGGTCAAAGCAGAGGGCGCCACCGGGCACGGTAGCCGGTTCATC
GAGGGCACCGCGGTGGGGAAGCTCATGGCGGTATGCGATAAGGCGCTGGC
GTTTCGAAAAGAACAGGAGGATATCTTGGGGCACAACGGCGGCTGCGGGC
ATGCGAAGGCCAAGAAACTCGGTGACGTCACGACGCTTAACCTCACGATG
CTACAGGCTGGCGTCGCCACGGCCGGTGGTGAGAATGGTGCGGGCGGGGG
GGGCACTGCTACCAGGCATAAGCGGTACGCGCTGAACGTTGTACCGACGG
AGGCTCACGCTGGGTTCGACGTGAGGATAGATCCGAACACGCCCACCGAG
GATTTCCGAGCCCGCGTGTCGAAGTGGTGTCATGAGGAGGGCGTTACGTG
GGAGTTTGCCGACTGGACCTCGCCCCTGGATCAGCATTACCTCACCTCGA
TAGATCGGGATGAAAATCCGTGGTGGGGTGTATTCCTGGACGTCATGGAG
AAAGGTGGCGTAGAGGTGGAGCCCGAGATATTTCCAGCGAGCACTGATAG
CCGGTTTATCCGACAGCTGGGCATCCCCGCCCTGGGCTTCTCGCCCATGC
GGAACACACCCATCATGCTGCACGACCATAACGAGTTTATCGATCAGAGA
GTGTTTCTGGACGGAATCCGAGTGTACGAGCGTCTCATCGCAGCTTTGGC
GTCAACGGAAAGCCTTAGTACGGAGAAGCGAATCTCGGGATTATAGGACG
TCATGGAGAAAGGTGGCGTAGAGGTGGAGCCCGAGATATTTCCAGCGAGC
ACTGATAGCCGGTTTATCCGACAGCTGGGCATCCCCGCCCTGGGCTTCTC
GCCCATGCGGAACACACCCATCATGCTGCACGACCATAACGAGTTTATCG
ATCAGAGAGTGTTTCTGGACGGAATCCGAGTGTACGAGCGTCTCATCGCA
GCTTTGGCGTCAACGGAAAGCCTTAGTACGGAGAAGCGAATCTCGGGATT
ATAG
back to top