prot_H-paniculata_contig9313.17096.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9313.17096.1
Unique Nameprot_H-paniculata_contig9313.17096.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length298
Homology
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 201 bits (511), Expect = 1.090e-54
Identity = 112/302 (37.09%), Postives = 166/302 (54.97%), Query Frame = 0
Query:    1 DTKLLHERLGHVRDLLTVARQQSIRLSRKL-------GVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPVDK-SFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            D+ L H+RLGH     T+ R  S  L + L        +C  C+ GK  + P       R TE L+LV++ + GP+   S  G ++ ++F+DD +RM  V+ L++KS+   +  +F+  V    GL++KRLRSD+G EYT   F++F    GI+ + +  YTPQQ    E   R+            + EMAR       +   +WAEAV ++V+ LN  PT+     TP+E WHG+TP ++HL+VFGC  Y +    +R KL+ K+  G+F GY   S  Y I NP TK I +SR+V+FDE
Sbjct:  392 DSFLWHKRLGHF-SYSTLKRMSSNDLVKNLPAIQDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRT------------VMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU)

HSP 1 Score: 199 bits (507), Expect = 1.660e-54
Identity = 120/298 (40.27%), Postives = 166/298 (55.70%), Query Frame = 0
Query:    4 LLHERLGHVRDL-LTVARQQSI-----RLSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPV-DKSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            L H R GH+    L +  Q+S+      +  +  +C  C  GK  R P  +    R   PLELV++ I GP    SF   R+ I+FVDD SRM  VY L QKSEA    KQF+      +G  +K LR+D GGE+T   F ++   NGIK+E +A YTPQQ    E   R+            I EMAR+     ++ + +WAEA+ +AV  LNR+PT+    +TP+E WH   PK+D  ++FGCTAY    SQ+R K ++K    +F GY D S +Y +I+P+TKS+ +SR V FDE
Sbjct:  124 LWHLRYGHLNQRSLQLLHQKSMVVGLPSIHSEKEICEGCIFGKFHRLPF-SQSSWRAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRT------------IVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 408          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU)

HSP 1 Score: 199 bits (507), Expect = 3.690e-54
Identity = 120/298 (40.27%), Postives = 166/298 (55.70%), Query Frame = 0
Query:    4 LLHERLGHVRDL-LTVARQQSI-----RLSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPV-DKSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            L H R GH+    L +  Q+S+      +  +  +C  C  GK  R P  +    R   PLELV++ I GP    SF   R+ I+FVDD SRM  VY L QKSEA    KQF+      +G  +K LR+D GGE+T   F ++   NGIK+E +A YTPQQ    E   R+            I EMAR+     ++ + +WAEA+ +AV  LNR+PT+    +TP+E WH   PK+D  ++FGCTAY    SQ+R K ++K    +F GY D S +Y +I+P+TKS+ +SR V FDE
Sbjct:  361 LWHLRYGHLNQRSLQLLHQKSMVVGLPSIHSEKEICEGCIFGKFHRLPF-SQSSWRAKAPLELVHADICGPTRTPSFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRT------------IVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSLVISRDVIFDE 645          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A251TN47_HELAN (Putative zinc finger, CCHC-type n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TN47_HELAN)

HSP 1 Score: 194 bits (492), Expect = 3.860e-52
Identity = 113/301 (37.54%), Postives = 164/301 (54.49%), Query Frame = 0
Query:    1 DTKLLHERLGHVR--DLLTVARQQSI----RLSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPVDK-SFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            ++ L H R GH+    L  + +  ++    ++++   VC  C  GK +R+P     + R +EPL+LV+S I GP++  S GGC++ I F+DD SR   VY L+ KS+AL   K F++ V      +IK +R+D GGEY    F+ F   NGI  + +  YTPQQ    E   R+            + E++R+      + + YWAEAV  A + LNRA T+   + TP E W G+ P +DHLRVFGC AYV    Q R KL+DK    +F GY ++S  Y + NP T  + +SR V F E
Sbjct:  436 NSTLWHRRYGHLNLETLHDMGKNGTVNGLPKINKSEHVCEGCVFGKHARKPFSKKAKWRASEPLQLVHSDICGPMNTPSIGGCKYFITFIDDFSRKTWVYFLKLKSDALHYFKIFKQLVENQIERKIKGIRTDRGGEYCGHEFQNFLKNNGIHHQLTTSYTPQQNGVAERKNRT------------LMELSRSMLKMKELPNTYWAEAVACATYLLNRATTKSVPKLTPQEAWSGKKPNVDHLRVFGCIAYVHIPKQHRSKLDDKTERAIFVGYSEHSKGYKLFNPITHKMIISRDVIFSE 724          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A251SKN6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251SKN6_HELAN)

HSP 1 Score: 193 bits (491), Expect = 5.610e-52
Identity = 113/302 (37.42%), Postives = 167/302 (55.30%), Query Frame = 0
Query:    1 DTKLL-HERLGHVR-DLLTVARQQSI-----RLSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPV-DKSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            DT +L H+R GHV  D L     + +     ++ ++  +C  C  GK +++        + ++PL+LV+S I GP+  +S GGCR+ I F+DD +R   VY L+ KSEAL   K+F+    + +   IK LRSD GGEY    F+++  VNGI+ + +  Y+PQQ    E   R+            + E++R+      + + YWAEAV  A + LNR  T+     TPYE W+G  P ++HL+VFGC AYV    Q+R KL+ K    VF GY +NS  Y + NP++  I +SR V FDE
Sbjct: 1181 DTTILWHKRYGHVNVDTLISMENKGLVFGLPKIMKRESLCEGCISGKQTKKTFPRKAIWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALSYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNEFQEYLKVNGIRHQLTNSYSPQQNGVAERKNRT------------LMELSRSMMNAKELPTCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 1470          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: Q9LH44_ARATH (Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9LH44_ARATH)

HSP 1 Score: 191 bits (484), Expect = 4.600e-51
Identity = 108/303 (35.64%), Postives = 167/303 (55.12%), Query Frame = 0
Query:    2 TKLLHERLGHVRDLLTVARQQSIRLSRKL-------GVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPVD-KSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRE-TPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDEE 295
            T L H+R GHV +   +   Q++++  KL       G+C+ACE GK SR+      Q  T + LEL++S + GP+  +S  G R+ + F+DD SRM  VY L+ KSE +   K F+  V   +  RIKRLR+D GGE+  + F +    +GI  E +  Y+PQQ    E   R+            + EMAR+      + +++WAEA+ ++ +  NR P++   +  TP E W G+ P +DHL+VFGC  Y+    ++RRKL+ KA  G+F GY + S  Y +     + I++S+ V FDE+
Sbjct:  454 TDLWHKRFGHV-NYDKIETMQTLKIVEKLPKFEVIKGICAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEFLSREFIKLCQESGIHHEITTPYSPQQNGVAERRNRT------------LVEMARSMIEEKKLSNKFWAEAIATSTYLQNRLPSKSLEKGVTPMEIWSGKKPSVDHLKVFGCVCYIHIPDEKRRKLDTKAKQGIFVGYSNESKGYRVFLLNEEKIEVSKDVTFDEK 743          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A251UIF2_HELAN (Integrase catalytic domain-containing protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UIF2_HELAN)

HSP 1 Score: 190 bits (483), Expect = 6.200e-51
Identity = 112/302 (37.09%), Postives = 166/302 (54.97%), Query Frame = 0
Query:    1 DTKLL-HERLGHVR-DLLTVARQQSI-----RLSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPV-DKSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            DT +L H+R GHV  D L     + +     ++ ++  +C  C  GK +++        + ++PL+LV+S I GP+  +S GGCR+ I F+DD +R   VY L+ KSEAL   K+F+    + +   IK LRSD GGEY    F+++  VN I+ + +  Y+PQQ    E   R+            + E++R+      + + YWAEAV  A + LNR  T+     TPYE W+G  P ++HL+VFGC AYV    Q+R KL+ K    VF GY +NS  Y + NP++  I +SR V FDE
Sbjct:  429 DTSILWHKRYGHVNVDTLINMENKGLVFGLPKIMKQESLCEGCISGKQTKKTFPRKAMWQASKPLQLVHSDICGPMRTESIGGCRYFITFIDDYTRKSWVYFLKYKSEALNYFKRFKALNEKQSDHLIKTLRSDRGGEYCSNAFQEYLKVNCIRHQLTNSYSPQQNGVAERKNRT------------LMELSRSMMNAKELPNCYWAEAVACATYILNRTVTKTRPNITPYEAWNGNKPNVEHLKVFGCLAYVHIPKQRRDKLDKKTEKTVFVGYSENSKGYKLYNPQSNKIIISRDVVFDE 718          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A251T2S6_HELAN (Putative zinc finger, CCHC-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T2S6_HELAN)

HSP 1 Score: 188 bits (478), Expect = 2.620e-50
Identity = 110/298 (36.91%), Postives = 157/298 (52.68%), Query Frame = 0
Query:    4 LLHERLGHVR--DLLTVARQQSI----RLSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPVD-KSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDE 294
            L H R GHV    L  +   +++    ++ +   +C  C  GK +R+P       R +EPL+L++S I GP+  +S GGCR+ I F+DD SR   VY L+ KS+AL   + F+R      G +IK +R+D GGEY    F+ F   NGI  + +  YTPQQ    E   R+            + E++R+      + + YWAEAV  A + LNR  T+     TP E W G+ P +DHLR+FGC AYV    Q R KL+ K    +F GY ++S +Y + NP T    +SR V F E
Sbjct:  356 LWHRRYGHVNFETLHDMGMNETVSGLPKIDKSSHICEGCIFGKHARKPFSKKAVWRASEPLQLIHSDICGPMKTQSIGGCRYFITFIDDFSRKTWVYFLKFKSQALSYFRNFKRLAENQIGYKIKSMRTDRGGEYCGHEFQNFLKENGIHHQLTTSYTPQQNGVAERKNRT------------LMELSRSMMKMKELPNMYWAEAVSCATYLLNRTITKSVPELTPQEVWSGRKPNVDHLRIFGCIAYVHIPKQNRTKLDVKTERVIFVGYSEHSKAYKLYNPVTNRTIISRDVIFSE 641          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: A0A5H2YBV8_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2YBV8_PRUDU)

HSP 1 Score: 187 bits (475), Expect = 4.510e-50
Identity = 114/299 (38.13%), Postives = 158/299 (52.84%), Query Frame = 0
Query:    4 LLHERLGHV--RDLLTVARQQSIR----LSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPVDK-SFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDEE 295
            L H R GH+    L  + +Q  +R    +  +  VC AC  GK  R         R + PLELV+S + GP++  S GG R+ + F+DD SR   VY L+ KSE     K F+    + +G  +K LRSD GGE++   F  F   NGIK +F+A YTPQQ    E   R+            I E+AR+      M +R+WAEAV  AV+ LNRA +     +TP E W G  P + HLR+FG  AY     + RRKL+DK+   +  GY + + +Y + NP T  I +SR V+F+EE
Sbjct:  496 LWHLRYGHLSFNTLSLMGKQHMVRGLPTIQHQTQVCEACVLGKHQRNSFLTGYSWRASHPLELVHSDVCGPMNTTSTGGNRYFLTFIDDYSRKTWVYFLKYKSEVFDYFKVFKALAEKQSGFALKTLRSDQGGEFSSNVFENFLKENGIKHQFTARYTPQQNGVAERKNRT------------IMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKSEKCILVGYSEKAKAYKLFNPLTNKIIVSRDVKFNEE 782          
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Match: UPI0016531AD1 (uncharacterized protein LOC110900599 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI0016531AD1)

HSP 1 Score: 187 bits (476), Expect = 5.330e-50
Identity = 111/299 (37.12%), Postives = 164/299 (54.85%), Query Frame = 0
Query:    4 LLHERLGHV--RDLLTVARQQSIR----LSRKLGVCSACEKGKASRQPVKNYRQDRTTEPLELVNSGIAGPVD-KSFGGCRFAIIFVDDCSRMRKVYTLRQKSEALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFSADYTPQQERCGEVSWRSXXXXXXXXXXXSIFEMARASTITANMGSRYWAEAVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQQRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDEE 295
            L H RLGH+  R +  +AR+  +R    +     +C  C   K +RQ   N  Q R  EPLELV + + GP+  ++ GG R+ ++ VDD  R   VY ++ K +A    K+F+  V + +  +IK LR+D GGE+T + F  F   +GI ++ +A YTPQQ   G V  R+           ++ E  R+   T  +   +W EAVR AV+ LNR  T+  N  TPYE+W G+ P L HLRVFGC AYV  +  +  KL+D++ T V+ G +  S +Y + NPK   I + R V F+E+
Sbjct:  481 LWHSRLGHINFRKMEEMARKGMVRGIPSIKHPTQLCEGCLVSKQTRQSFPNEAQWRAKEPLELVYADLCGPITPQTAGGNRYFLLIVDDFCRFMWVYMIKTKDQAFMEFKKFKTLVEKQSSYKIKTLRTDRGGEFTSRAFNLFCEEHGINRQLTAPYTPQQN--GVVERRNR----------TVLEATRSLLKTMKVPDTFWGEAVRHAVYVLNRVSTKALNNMTPYERWKGRKPTLQHLRVFGCVAYVK-KFNEITKLSDRSETMVYLGVEKGSKAYRLYNPKENKIVVGRDVEFEEK 766          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9313.17096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151T355_CAJCA1.090e-5437.09Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Y1QWW3_PRUDU1.660e-5440.27Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A4Y1R9H3_PRUDU3.690e-5440.27Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A251TN47_HELAN3.860e-5237.54Putative zinc finger, CCHC-type n=2 Tax=Helianthus... [more]
A0A251SKN6_HELAN5.610e-5237.42Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
Q9LH44_ARATH4.600e-5135.64Copia-like retrotransposable element n=1 Tax=Arabi... [more]
A0A251UIF2_HELAN6.200e-5137.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A251T2S6_HELAN2.620e-5036.91Putative zinc finger, CCHC-type n=1 Tax=Helianthus... [more]
A0A5H2YBV8_PRUDU4.510e-5038.13Transposable element protein n=1 Tax=Prunus dulcis... [more]
UPI0016531AD15.330e-5037.12uncharacterized protein LOC110900599 n=1 Tax=Helia... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 76..158
e-value: 3.7E-11
score: 43.2
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 41..230
score: 12.885
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 47..257
e-value: 1.8E-21
score: 78.2
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 5..295
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..295
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 52..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9313contigH-paniculata_contig9313:8289..9182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9313.17096.1mRNA_H-paniculata_contig9313.17096.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9313 8289..9182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9313.17096.1 ID=prot_H-paniculata_contig9313.17096.1|Name=mRNA_H-paniculata_contig9313.17096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
DTKLLHERLGHVRDLLTVARQQSIRLSRKLGVCSACEKGKASRQPVKNYR
QDRTTEPLELVNSGIAGPVDKSFGGCRFAIIFVDDCSRMRKVYTLRQKSE
ALWSLKQFERDVARANGLRIKRLRSDHGGEYTWKPFRQFGAVNGIKQEFS
ADYTPQQERCGEVSWRSWRSWRSWRSWRSIFEMARASTITANMGSRYWAE
AVRSAVHCLNRAPTRPHNRETPYEKWHGQTPKLDHLRVFGCTAYVMFQSQ
QRRKLNDKAWTGVFPGYDDNSPSYCIINPKTKSIQLSRHVRFDEENFV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf