prot_H-paniculata_contig1272.1709.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1272.1709.1
Unique Nameprot_H-paniculata_contig1272.1709.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length247
Homology
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: D7FYW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYW2_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 1.600e-61
Identity = 117/226 (51.77%), Postives = 154/226 (68.14%), Query Frame = 0
Query:   24 FVPITGRWH--STSASCCPSRSYCSTGRGVARPSMMAGFGGNTSKKPKEKPALVGAGKGQKVYERQMRSFTGLAGAGADVVDVYVYEQNSDDDKFVFAGKVAWSSEVTMEQALQWHRDLIVNHVKLLEP--KIKP-PLRIFTAPGNSEVEVARNIHDLKWVLG-GKGS-VSVEGVKNAQVGYKPELYEPGDKYFYVRRLPDGKSPEPPAEIMVESLDKMVNAGVIP 242
            F P+T  W    TS++     S        +R  MM GFGG     P++K  +VG G+GQ  Y+RQ++S+ GL  AGA+  DVYV+ +   DDKF+F GK AWSS +T++QALQ+ R LI+ HV+LLEP  K KP P+RIFTAP NSE+EVARNIHDL  VLG GKG  V V+ +   +VG +PELYE G+ YFYVR+L DGK P PP+E+M+E++D +V  GV+P
Sbjct:   22 FAPLTAGWQLRQTSSAWHMIPSGRPRSATSSRVMMMGGFGG-----PEKKKKVVGVGRGQDAYQRQVKSYHGLTEAGAEGADVYVHREG--DDKFIFMGKAAWSSGITVQQALQFQRGLILGHVELLEPMWKDKPAPMRIFTAPINSEIEVARNIHDLVRVLGPGKGKDVKVDKLTPQEVGLRPELYELGEPYFYVRKLDDGKCPAPPSEVMIETMDNLVAKGVVP 240          
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: A0A7S2A9K5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9K5_TRICV)

HSP 1 Score: 66.6 bits (161), Expect = 2.950e-9
Identity = 49/141 (34.75%), Postives = 76/141 (53.90%), Query Frame = 0
Query:   86 RQMRSFTGLAGAGADVVDVYVYEQNSDDDKFVFAGKVAWSSEVTMEQALQWHRDLIVNHVKLLE-----PKIKPPLRIFTAPGNSEVEVARNIHDLKWVLGGKGSVSVEG---VKNAQVGYKPELYEPGDKYFYVRRLPDG 218
            RQ  +F  +  AG   +   VY ++   D F F GK A  S+V++  A+     LI  H   L      PK +  + ++TAPG+SE++VA N  +LK+V   +    VEG   VK+A+VG++ E+Y+ G++ F   R  DG
Sbjct:  119 RQNNNFVAIREAGGPELTNDVYARDPSTDVFFFVGKCARVSDVSVRAAVARQWPLIEEHACRLRRFELFPK-RGTVELWTAPGDSELDVAYNRPELKFVKMDRTD-DVEGARDVKSAEVGFQGEIYDQGEEGFRTWRTEDG 257          
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: A0A7S2EHA8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHA8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.490e-8
Identity = 47/162 (29.01%), Postives = 84/162 (51.85%), Query Frame = 0
Query:   86 RQMRSFTGLAGAGADVVDVYVYEQNSDDDKFVFAGKVAWSSEVTMEQALQWHRDLIVNHVKLLEP------KIKPPLRIFTAPGNSEVEVARNIHDLKWVLGGKGSV--SVEGVKNAQVGYKPELYEPGDKYFYVRRLPDGK--SPE--PPAEIMVESLDKM 235
            RQ + F  +  A    +   VY ++ +   F F GK+A  S+V++EQA+     LI  H + L P      K +  L+I+TAPG+SE++VA N  + ++    +       E ++  ++G++ E+Y+  ++ F   R  DG+  +PE  P +E    + D+M
Sbjct:   89 RQSQHFVAIREAAGSQLTNDVYVRDVETSTFWFVGKIARISDVSLEQAVARQWPLIEQHARRLRPIELYSKKGRDALQIWTAPGDSELDVAYNRPNTQFQKMKRADEIPGAEKIRAIEIGFQGEMYQQNEEGFRTVRTEDGRPANPEVQPTSETRAPTNDEM 250          
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: A0A7S4ENJ4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ENJ4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.230e-6
Identity = 36/110 (32.73%), Postives = 60/110 (54.55%), Query Frame = 0
Query:  118 FAGKVAWSSEVTMEQALQWHRDLIVNHVKLLEP----KIKPPLRIFTAPGNSEVEVARNIHDLKWVLGGKGSVSVEGVKNAQVGYKPELYEPGDKYFYVRRLPDGKSPEP 223
            + GKVA  SEV++E  +    ++I  H   L P      +  L ++TAPG++E+EVA N  +L  V   K +V  + ++N  +G++ E+Y+ G++ F   R  DG    P
Sbjct:  148 YVGKVAKVSEVSLEDCIARQWNVIETHAANLRPIELYGHRGNLELWTAPGDTELEVAYNRPELVMVKMEKYAVDSKDLRNNLIGFQGEVYQEGEEGFRSWRNEDGSPARP 257          
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: A0A7S2U4N4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U4N4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.860e-5
Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   99 ADVVDVYVYEQNSDDDKFVFAGKVAWSSEVTMEQ----ALQWHRDLIVNHVKLL----EPKIKPP---------LRIFTAPGNSEVEVARNIHDLKWVLGGKGSVSVEGVKNAQVGYKPELY---EPGDKYFYVRRLPDGKSPEPPAEI 227
            A   DVYV    +D  KF F GKV    ++  E+    ++    + +++  +L+    + K++P          L I+TAPG+SE++V +N+  L  ++G  G +S E    A VGY PE+Y   E  D    V R  +GK  +P  +I
Sbjct:  158 ASTSDVYVKAPLNDPKKFWFVGKVNRRLDIDDEELVGLSVPTEAEAVLSQKRLILEYSKTKLRPQNLGGPFAKDLEIWTAPGDSEMDVVKNLITLVKIVGSMGDIS-ETFAVADVGYNPEIYIGDEVRDGGLRVVRDEEGKPVKPVFDI 305          
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: A0A448ZK73_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK73_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.380e-5
Identity = 34/110 (30.91%), Postives = 60/110 (54.55%), Query Frame = 0
Query:  118 FAGKVAWSSEVTMEQALQWHRDLIVNHVKLLEP-KIKPP---LRIFTAPGNSEVEVARNIHDLKWVLGGKGSVSVEGVKNAQVGYKPELYEPGDKYFYVRRLPDGKSPEP 223
            + GKVA  ++V++E  +    ++I  H   L P ++ P    L I+TAPG++E++VA N  +L      K  V  + ++N  +G++ E+Y+ G++ F   R  DG    P
Sbjct:  129 YVGKVAKITDVSLEDCIARQWNIIETHAANLRPIELYPQRGNLEIWTAPGDTELDVAYNRPELVMARMEKYEVLAKDLRNNLIGFQGEVYQEGEEGFRTWRKEDGSPARP 238          
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Match: A0A7S4MZ33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MZ33_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 6.080e-5
Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 0
Query:   95 AGAGADVVDVYVYEQNSDDDKFVFAGKVAWSSEVTMEQALQWHRDLIVNHVKLLEP----KIKPPLRIFTAPGNSEVEVARN 172
            AG      DVYV + ++D D F FAGKVA  S+V  E A+    +LI  H   L P    + +  L ++TAPG+SE++VA N
Sbjct:  131 AGGPELTYDVYVRDPSNDADVFWFAGKVAAVSDVNAELAVARQWNLIEEHACRLRPLDLRRARGSLELWTAPGDSEMDVAYN 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1272.1709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FYW2_ECTSI1.600e-6151.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2A9K5_TRICV2.950e-934.75Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2EHA8_9STRA1.490e-829.01Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4ENJ4_9STRA8.230e-632.73Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S2U4N4_9STRA2.860e-530.87Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A448ZK73_9STRA3.380e-530.91Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4MZ33_9STRA6.080e-541.46Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1272contigH-paniculata_contig1272:1092..3928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1272.1709.1mRNA_H-paniculata_contig1272.1709.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1272 1057..3976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1272.1709.1 ID=prot_H-paniculata_contig1272.1709.1|Name=mRNA_H-paniculata_contig1272.1709.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=247bp
MELGLMLKAVLLLGVSFKLADSFFVPITGRWHSTSASCCPSRSYCSTGRG
VARPSMMAGFGGNTSKKPKEKPALVGAGKGQKVYERQMRSFTGLAGAGAD
VVDVYVYEQNSDDDKFVFAGKVAWSSEVTMEQALQWHRDLIVNHVKLLEP
KIKPPLRIFTAPGNSEVEVARNIHDLKWVLGGKGSVSVEGVKNAQVGYKP
ELYEPGDKYFYVRRLPDGKSPEPPAEIMVESLDKMVNAGVIPPPAA*
back to top