prot_H-paniculata_contig9308.17090.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9308.17090.1
Unique Nameprot_H-paniculata_contig9308.17090.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A6H5KYH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH2_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.610e-38
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAAYFSDGAIAMLAGGP 81
            LDPN+GDAWAA YAFELQQGTE EQ DVL RCVAAEPAHGELWTS+SKTTENRRL KA ILKKVVAAYFSDGA+ ++ GGP
Sbjct:  382 LDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGP 462          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: D7FHD2_ECTSI (PRP1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD2_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 2.680e-37
Identity = 68/81 (83.95%), Postives = 73/81 (90.12%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAAYFSDGAIAMLAGGP 81
            LDPN+GDAWAA YAFELQQGTE EQ DVL RCVAAEPAHGELWTS+SKTTENRRL KA ILKKVVAAYFSDGA+ ++ GGP
Sbjct:  743 LDPNMGDAWAAYYAFELQQGTEVEQKDVLDRCVAAEPAHGELWTSVSKTTENRRLDKASILKKVVAAYFSDGAVVVIPGGP 823          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: D8LE81_ECTSI (Pre-mRNA splicing factor, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE81_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.040e-28
Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKT--TENRRLSKAEILKKVVAAYFS-DGAIAMLAGGP 81
            LDP +GDAWA  YAFELQQGT+ E+ DVL RCVAA+P+HGELW SISKT  TE +R  KA IL+KVVAAYFS +G + ++  GP
Sbjct:   14 LDPYMGDAWAVHYAFELQQGTDVERTDVLGRCVAADPSHGELWKSISKTNTTEKQRFDKASILRKVVAAYFSGNGVVVVIPRGP 97          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A835YM25_9STRA (PRP1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM25_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.960e-22
Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAAYFS 70
            LD + GDAWAA +AFELQQGT  +QADV+ RCV AEP+HGELW S+SK T N+RL +  +L+KVVA YF+
Sbjct:  743 LDADNGDAWAAFFAFELQQGTAEQQADVIARCVKAEPSHGELWCSVSKKTGNQRLDRETVLRKVVAQYFA 812          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A7S2USD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USD3_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.980e-21
Identity = 46/72 (63.89%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAAYFSDG 72
            LDP++GDAWA  YAFELQ G + +Q ++LKRCVAAEP HGELW   SK TENRR +   ILKKVVAA    G
Sbjct:  254 LDPDLGDAWALFYAFELQHGKKEDQEELLKRCVAAEPTHGELWCGTSKKTENRRCNTETILKKVVAALAGIG 325          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A7S3XY73_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY73_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 1.140e-20
Identity = 45/66 (68.18%), Postives = 52/66 (78.79%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVA 66
            L P +GDAWA  YAFEL+QGT  EQ  VL RCVAAEPAHGELW +++K T NRRL  AE+L+KVVA
Sbjct:  647 LRPGLGDAWARFYAFELRQGTPEEQRAVLDRCVAAEPAHGELWQAVAKRTANRRLGPAEVLRKVVA 712          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A061ET01_THECC (Pre-mRNA splicing factor-related n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A061ET01_THECC)

HSP 1 Score: 82.8 bits (203), Expect = 1.190e-18
Identity = 40/67 (59.70%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAA 67
            L P++GD WA  Y FELQ+G+E  Q DV+KRCVAAEP HGE W +ISK  EN       ILKKVV A
Sbjct:   36 LAPDIGDFWALYYKFELQRGSEENQKDVMKRCVAAEPKHGEKWQAISKAVENSHQPTEAILKKVVVA 102          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: UPI00098E1367 (protein STABILIZED1 n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E1367)

HSP 1 Score: 88.2 bits (217), Expect = 1.670e-18
Identity = 45/67 (67.16%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAA 67
            L P+VGD WA  Y FELQ G E  Q DVLKRCVAAEP HGE WTSISK  EN  L    ILKKVV A
Sbjct:  862 LSPDVGDFWALYYKFELQHGNEDTQKDVLKRCVAAEPKHGERWTSISKAVENSHLLVEAILKKVVVA 928          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A5P1FRW4_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FRW4_ASPOF)

HSP 1 Score: 88.2 bits (217), Expect = 1.680e-18
Identity = 45/67 (67.16%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVAA 67
            L P+VGD WA  Y FELQ G E  Q DVLKRCVAAEP HGE WTSISK  EN  L    ILKKVV A
Sbjct:  934 LSPDVGDFWALYYKFELQHGNEDTQKDVLKRCVAAEPKHGERWTSISKAVENSHLLVEAILKKVVVA 1000          
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Match: A0A4D9D6Q2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Q2_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 4.260e-18
Identity = 37/66 (56.06%), Postives = 55/66 (83.33%), Query Frame = 0
Query:    1 LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTTENRRLSKAEILKKVVA 66
            L+P++GD+WA  YAFEL+ G+E ++++VLK+C+ A+P HG +WT++SK+ EN R+SK  ILKKVVA
Sbjct:  866 LNPDLGDSWAYYYAFELRHGSETDKSEVLKKCLEADPTHGGIWTAVSKSVENWRVSKESILKKVVA 931          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9308.17090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYH2_9PHAE2.610e-3883.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHD2_ECTSI2.680e-3783.95PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LE81_ECTSI1.040e-2865.48Pre-mRNA splicing factor, putative n=1 Tax=Ectocar... [more]
A0A835YM25_9STRA6.960e-2264.29PRP1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S2USD3_9STRA1.980e-2163.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XY73_HETAK1.140e-2068.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A061ET01_THECC1.190e-1859.70Pre-mRNA splicing factor-related n=2 Tax=Pentapeta... [more]
UPI00098E13671.670e-1867.16protein STABILIZED1 n=1 Tax=Asparagus officinalis ... [more]
A0A5P1FRW4_ASPOF1.680e-1867.16Uncharacterized protein n=1 Tax=Asparagus officina... [more]
A0A4D9D6Q2_9STRA4.260e-1856.06Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027108Pre-mRNA-processing factor 6/Prp1/STA1PANTHERPTHR11246:SF1PRE-MRNA-PROCESSING FACTOR 6coord: 1..67
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9308contigH-paniculata_contig9308:1408..1842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9308.17090.1mRNA_H-paniculata_contig9308.17090.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9308 1408..1842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9308.17090.1 ID=prot_H-paniculata_contig9308.17090.1|Name=mRNA_H-paniculata_contig9308.17090.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
LDPNVGDAWAASYAFELQQGTEAEQADVLKRCVAAEPAHGELWTSISKTT
ENRRLSKAEILKKVVAAYFSDGAIAMLAGGPGSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027108Prp6/Prp1/STA1