prot_H-paniculata_contig9304.17086.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9304.17086.1
Unique Nameprot_H-paniculata_contig9304.17086.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length242
Homology
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BLAST of mRNA_H-paniculata_contig9304.17086.1 vs. uniprot
Match: D7FXU4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU4_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 3.850e-14
Identity = 61/123 (49.59%), Postives = 71/123 (57.72%), Query Frame = 0 
Query:    1 SLREARERLNGPLARVVEENSQSLLESVEKFSKAFADSPHEHL----ERRGRANXXXXXXXXXXXXXSNGSSGANRDGRGVDVSGDHQGAEG----ARERRWEARKKEGTRALVMIRRQILAR 115
            SLR+ARERL+GPLAR VEE+S+ LLESVE FS  FA SPHEH+    +R G A              S G  GA         +G   GA G    A  RR EARK EG RAL +IRRQ++AR
Sbjct:  670 SLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRLGGAE-------------SKGDEGA-----ASGTAGPGPGARGETGEAASRRAEARKSEGVRALALIRRQVVAR 774
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BLAST of mRNA_H-paniculata_contig9304.17086.1 vs. uniprot
Match: A0A6H5KDI0_9PHAE (Kinesin-like protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-8
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0 
Query:    1 SLREARERLNGPLARVVEENSQSLLESVEKFSKAFADSPHEHL----ERRGRA 49
            SLR+ARERL+GPLAR VEE+S+ LLESVE FS  FA SPHEH+    +RRG A
Sbjct:  422 SLRDARERLHGPLARAVEESSKKLLESVESFSAKFAASPHEHIGGGVQRRGGA 474
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9304.17086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXU4_ECTSI3.850e-1449.59Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KDI0_9PHAE1.440e-867.92Kinesin-like protein (Fragment) n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9304contigH-paniculata_contig9304:285..2063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9304.17086.1mRNA_H-paniculata_contig9304.17086.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9304 285..2063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9304.17086.1 ID=prot_H-paniculata_contig9304.17086.1|Name=mRNA_H-paniculata_contig9304.17086.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp
SLREARERLNGPLARVVEENSQSLLESVEKFSKAFADSPHEHLERRGRAN
NNSGGGGGGGNGSSNGSSGANRDGRGVDVSGDHQGAEGARERRWEARKKE
GTRALVMIRRQILARNPTLNPSQKAAAAAATTTKTKAIGGASCKPERRGT
SLVDAADREALCPAAEQLACAAEVVLIRDVILMADGSNATRDRFSPAVTT
GVPKTATGLSENGGGDDNCREEKEGTVKVGAEGVAGTSSNNG
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