prot_H-paniculata_contig930.17082.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig930.17082.1
Unique Name	prot_H-paniculata_contig930.17082.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	151

Homology

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 2.150e-80
Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPAREP-PXXXSDTLSLEATGGASSSCC 150
            MSKMIMV+G PMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITK+HSFRTLKEWINEL+AQGPQDI IA+AGNKRDLE+ REVESSMA+AYADEIGAMFVETSAK+ THVQD+FVELSKRLP REP P      L+L+++G ASSSCC
Sbjct:   51 MSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSG-ASSSCC 200

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A812YTF7_SYMMI (Rab31 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YTF7_SYMMI)

HSP 1 Score: 189 bits (481), Expect = 9.150e-60
Identity = 90/120 (75.00%), Postives = 108/120 (90.00%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVEL 120
            MSKMIMV+GKP+KFQIWDTAGQEKYHSLAPMYYRGA AAI+VYDIT+ ++F+TLK W++EL+AQGPQ+I IA+AGNK DLE  RE+ESS A AYA EIGAM++ETSAK+D +V DIFV+L
Sbjct:    1 MSKMIMVDGKPIKFQIWDTAGQEKYHSLAPMYYRGAAAAIIVYDITRANTFKTLKNWVDELKAQGPQEIAIAVAGNKADLEDQREIESSAAAAYAQEIGAMYLETSAKDDLNVHDIFVQL 120

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.120e-58
Identity = 92/150 (61.33%), Postives = 121/150 (80.67%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPAREPPXXXSDTLSLEATGGASSSCC 150
            MSK+IMV+G P+KFQIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK  +F+TLK+W+ ELR+QGP++I IA+AGNK DLE++REV+++ A++YA  IGA F+ETSAK   +V +IF  +SK+LP +E      + L+L+A  G+S  CC
Sbjct:   49 MSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESEREVDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNKLNLKAGKGSSGGCC 198

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.690e-57
Identity = 90/125 (72.00%), Postives = 106/125 (84.80%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 125
            MSKMIMVE  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP++I IAIAGNK DLE  REV S+ A+AYADEIGA+F+ETSAKEDT+V D+F+ +SK+LP
Sbjct:   48 MSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 178 bits (452), Expect = 3.000e-54
Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 125
            MSKMI+V   P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE  REV +S ARAYA EIGA+F+ETSAKEDT+V D+F+++S+ LP
Sbjct:   49 MSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALP 173

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 177 bits (449), Expect = 8.300e-54
Identity = 86/125 (68.80%), Postives = 103/125 (82.40%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 125
            MSKMI+V   P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE  REV +S ARAYA+EIGA+F+ETSAKED +V D+F+++S+ LP
Sbjct:   48 MSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 172 bits (437), Expect = 5.160e-52
Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPA 126
            MSKM++V  + +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S +TLK W+ EL+  GP +I IAIAGNK DL+  REV S  A+AYADEIGA+F+ETSAKEDT+V D+F  +S++LP+
Sbjct:   47 MSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKREVSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLPS 172

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A7S1CIJ3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIJ3_9STRA)

HSP 1 Score: 169 bits (427), Expect = 8.600e-51
Identity = 80/125 (64.00%), Postives = 101/125 (80.80%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 125
            M+KM++++  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IAIAGNK DL   REVE   AR YA  IGA+++ETSAK D++V+ +FV+++ RLP
Sbjct:   22 MAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 146

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.000e-49
Identity = 80/125 (64.00%), Postives = 101/125 (80.80%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 125
            M+KM++++  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IAIAGNK DL   REVE   AR YA  IGA+++ETSAK D++V+ +FV+++ RLP
Sbjct:  129 MAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253

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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.720e-49
Identity = 84/126 (66.67%), Postives = 104/126 (82.54%), Query Frame = 0

Query:    1 MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPA 126
            MSKM++V  + +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DL+  REV S+ A+AYADEIGA+F+ETSAKEDT+V D+F  +S++LP+
Sbjct:  239 MSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKREVSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLPS 364

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KE80_9PHAE	2.150e-80	83.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A812YTF7_SYMMI	9.150e-60	75.00	Rab31 protein (Fragment) n=1 Tax=Symbiodinium micr...	[more]
A0A7S2SUM8_9STRA	1.120e-58	61.33	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
F0WNT1_9STRA	3.690e-57	72.00	Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6...	[more]
D0N0I0_PHYIT	3.000e-54	69.60	Rab5 family GTPase, putative n=2 Tax=Phytophthora ...	[more]
K3X978_GLOUD	8.300e-54	68.80	Uncharacterized protein n=22 Tax=Oomycota TaxID=47...	[more]
A0A067CI89_SAPPC	5.160e-52	66.67	Uncharacterized protein n=7 Tax=Saprolegniaceae Ta...	[more]
A0A7S1CIJ3_9STRA	8.600e-51	64.00	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A7S1CIP5_9STRA	2.000e-49	64.00	Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20...	[more]
A0A3R7AA57_9STRA	3.720e-49	66.67	Uncharacterized protein n=4 Tax=Aphanomyces astaci...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 67..80 score: 39.45 coord: 5..27 score: 47.5 coord: 102..124 score: 35.37
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 1..122 e-value: 1.2E-6 score: -32.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..127 e-value: 9.2E-10 score: 23.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 2..127 e-value: 4.1E-35 score: 132.7
None	No IPR available	GENE3D	3.40.50.300		coord: 1..150 e-value: 6.4E-44 score: 151.6
None	No IPR available	PANTHER	PTHR24073:SF366	RAS-RELATED PROTEIN RAB-5C	coord: 9..127
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 9..127
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..150 score: 24.101
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 3..117 e-value: 5.7E-17 score: 59.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 2..124 e-value: 4.4E-39 score: 133.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..131

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig930	contig	H-paniculata_contig930:24955..27296 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig930.17082.1	mRNA_H-paniculata_contig930.17082.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig930 24135..28451 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig930.17082.1 ID=prot_H-paniculata_contig930.17082.1|Name=mRNA_H-paniculata_contig930.17082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHS
FRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGA
MFVETSAKEDTHVQDIFVELSKRLPAREPPPPPSDTLSLEATGGASSSCC
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase