mRNA_H-paniculata_contig930.17082.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig930.17082.1
Unique NamemRNA_H-paniculata_contig930.17082.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 1.640e-96
Identity = 153/179 (85.47%), Postives = 165/179 (92.18%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPAREP-PXXXSDTLSLEATGGASSSCC 534
            GVGKSSLV RFVTNNFKPYSESTIGASFMSKMIMV+G PMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITK+HSFRTLKEWINEL+AQGPQDI IA+AGNKRDLE+ REVESSMA+AYADEIGAMFVETSAK+ THVQD+FVELSKRLP REP P      L+L+++G ASSSCC
Sbjct:   23 GVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQREVESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSG-ASSSCC 200
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.170e-73
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 459
            GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMIMVE  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP++I IAIAGNK DLE  REV S+ A+AYADEIGA+F+ETSAKEDT+V D+F+ +SK+LP
Sbjct:   20 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKREVPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 238 bits (606), Expect = 3.280e-73
Identity = 116/178 (65.17%), Postives = 146/178 (82.02%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPAREPPXXXSDTLSLEATGGASSSCC 534
            GVGKSSLVLRF+TN FK Y ESTIGASFMSK+IMV+G P+KFQIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK  +F+TLK+W+ ELR+QGP++I IA+AGNK DLE++REV+++ A++YA  IGA F+ETSAK   +V +IF  +SK+LP +E      + L+L+A  G+S  CC
Sbjct:   21 GVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESEREVDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNKLNLKAGKGSSGGCC 198
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 233 bits (593), Expect = 3.120e-71
Identity = 120/180 (66.67%), Postives = 138/180 (76.67%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPAREPPXXXSDTLSLEATGGA--SSSCC 534
            GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI+V   P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE  REV +S ARAYA EIGA+F+ETSAKEDT+V D+F+++S+ LP           +     GG   SS CC
Sbjct:   21 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEIVDPYGGGKKKSSGCC 200
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 230 bits (587), Expect = 2.390e-70
Identity = 113/153 (73.86%), Postives = 131/153 (85.62%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 459
            GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI+V   P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE  REV +S ARAYA+EIGA+F+ETSAKED +V D+F+++S+ LP
Sbjct:   20 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 226 bits (575), Expect = 1.400e-68
Identity = 111/154 (72.08%), Postives = 132/154 (85.71%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPA 462
            GVGKSSLVLRFVTNNF+PYSESTIGASFMSKM++V  + +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S +TLK W+ EL+  GP +I IAIAGNK DL+  REV S  A+AYADEIGA+F+ETSAKEDT+V D+F  +S++LP+
Sbjct:   19 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKREVSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLPS 172
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.350e-66
Identity = 108/153 (70.59%), Postives = 129/153 (84.31%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 459
            GVGKSSLVLRFVTNNFKPYSESTIGASFM+KM++++  P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IAIAGNK DL   REVE   AR YA  IGA+++ETSAK D++V+ +FV+++ RLP
Sbjct:  101 GVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQREVEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 224 bits (571), Expect = 1.900e-65
Identity = 111/154 (72.08%), Postives = 132/154 (85.71%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLPA 462
            GVGKSSLVLRFVTNNF+PYSESTIGASFMSKM++V  + +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DL+  REV S+ A+AYADEIGA+F+ETSAKEDT+V D+F  +S++LP+
Sbjct:  211 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKREVSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLPS 364
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.620e-64
Identity = 103/112 (91.96%), Postives = 108/112 (96.43%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADR 336
            GVGKSSLV RFVTNNFKPYSESTIGASFMSKMIMV+G PMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITK+HSFRTLKEWINEL+AQGPQDI IA+AGNKRDLE+ R
Sbjct:   23 GVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134
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BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Match: A0A5D6XGD9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGD9_9STRA)

HSP 1 Score: 230 bits (587), Expect = 9.290e-63
Identity = 113/153 (73.86%), Postives = 131/153 (85.62%), Query Frame = 1 
Query:    1 GVGKSSLVLRFVTNNFKPYSESTIGASFMSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHSFRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGAMFVETSAKEDTHVQDIFVELSKRLP 459
            GVGKSSLVLRFVTNNF+PYSESTIGASFMSKMI+V   P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IAIAGNK DLE  REV +S ARAYA+EIGA+F+ETSAKED +V D+F+++S+ LP
Sbjct: 1230 GVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPDNIVIAIAGNKSDLEEKREVPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 1382
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig930.17082.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE80_9PHAE1.640e-9685.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0WNT1_9STRA1.170e-7376.47Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6... [more]
A0A7S2SUM8_9STRA3.280e-7365.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D0N0I0_PHYIT3.120e-7166.67Rab5 family GTPase, putative n=2 Tax=Phytophthora ... [more]
K3X978_GLOUD2.390e-7073.86Uncharacterized protein n=22 Tax=Oomycota TaxID=47... [more]
A0A067CI89_SAPPC1.400e-6872.08Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S1CIP5_9STRA2.350e-6670.59Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3R7AA57_9STRA1.900e-6572.08Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
D8LEW7_ECTSI1.620e-6491.96Rab22, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A5D6XGD9_9STRA9.290e-6373.86Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig930contigH-paniculata_contig930:24135..28451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score187.6
Seed ortholog evalue4.3e-45
Seed eggNOG ortholog653948.CCA22973
Preferred nameRAB31
KEGG koko:K07891
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000166,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0005829,GO:0005856,GO:0005886,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0006897,GO:0006898,GO:0006955,GO:0006996,GO:0007032,GO:0008104,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030139,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031623,GO:0031901,GO:0031982,GO:0031984,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032588,GO:0032868,GO:0032869,GO:0032870,GO:0032940,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042886,GO:0043001,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043299,GO:0043312,GO:0043434,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045335,GO:0046903,GO:0048193,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051716,GO:0061951,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090066,GO:0090150,GO:0090382,GO:0097159,GO:0097367,GO:0097494,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0098805,GO:0098876,GO:0099503,GO:1901265,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1990778
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0092@1,KOG0092@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131
Exons4
Model size1357
Cds size453
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig930.17082.1prot_H-paniculata_contig930.17082.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig930 24955..27296 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931157.3926032-UTR-H-paniculata_contig930:24134..249541622931157.3926032-UTR-H-paniculata_contig930:24134..24954Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig930 24135..24954 -
1691481616.286135-UTR-H-paniculata_contig930:24134..249541691481616.286135-UTR-H-paniculata_contig930:24134..24954Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig930 24135..24954 -
1622931157.4930856-UTR-H-paniculata_contig930:27296..273061622931157.4930856-UTR-H-paniculata_contig930:27296..27306Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig930 27297..27306 -
1691481616.3268092-UTR-H-paniculata_contig930:27296..273061691481616.3268092-UTR-H-paniculata_contig930:27296..27306Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig930 27297..27306 -
1622931157.5118098-UTR-H-paniculata_contig930:28377..284511622931157.5118098-UTR-H-paniculata_contig930:28377..28451Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig930 28378..28451 -
1691481616.3383458-UTR-H-paniculata_contig930:28377..284511691481616.3383458-UTR-H-paniculata_contig930:28377..28451Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig930 28378..28451 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931157.4177544-CDS-H-paniculata_contig930:24954..251551622931157.4177544-CDS-H-paniculata_contig930:24954..25155Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig930 24955..25155 -
1691481616.2984512-CDS-H-paniculata_contig930:24954..251551691481616.2984512-CDS-H-paniculata_contig930:24954..25155Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig930 24955..25155 -
1622931157.429691-CDS-H-paniculata_contig930:26463..266701622931157.429691-CDS-H-paniculata_contig930:26463..26670Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig930 26464..26670 -
1691481616.307505-CDS-H-paniculata_contig930:26463..266701691481616.307505-CDS-H-paniculata_contig930:26463..26670Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig930 26464..26670 -
1622931157.4607947-CDS-H-paniculata_contig930:27251..272961622931157.4607947-CDS-H-paniculata_contig930:27251..27296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig930 27252..27296 -
1691481616.3170564-CDS-H-paniculata_contig930:27251..272961691481616.3170564-CDS-H-paniculata_contig930:27251..27296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig930 27252..27296 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig930.17082.1

>prot_H-paniculata_contig930.17082.1 ID=prot_H-paniculata_contig930.17082.1|Name=mRNA_H-paniculata_contig930.17082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MSKMIMVEGKPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKIHS
FRTLKEWINELRAQGPQDITIAIAGNKRDLEADREVESSMARAYADEIGA
MFVETSAKEDTHVQDIFVELSKRLPAREPPPPPSDTLSLEATGGASSSCC
*
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mRNA from alignment at H-paniculata_contig930:24135..28451-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig930.17082.1 ID=mRNA_H-paniculata_contig930.17082.1|Name=mRNA_H-paniculata_contig930.17082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4317bp|location=Sequence derived from alignment at H-paniculata_contig930:24135..28451- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGTGGGAAAGTCAAGCCTTGTGCTGCGCTTCGTCACGAACAACTTTAA
GCCGTATTCGGAAAGCACCATCGGGTAAGCGTGAAGCTACAACTCTTAAT
CTTTGTTGATCATCGACGTACGAGCATGCTTGGCAGATGCAAGAGTGCTA
AGCAGTATATATATATATGAAAAAATCATGGCTGTTCTTCGGTTGCTACC
GATTTTTTTGGGGCTTATTTCCTGCTGTTTATTTTTCGTCTCTTGTATAC
TATGGTCACAGTAATTCAATGGTTGCGCTACCGTTCGGCCGGAATCCAGC
GATAAGGCCCGACAGCTTTGAAATACCAGGTCATCACATGGCCTCTATAC
GTGGCTCGTACGAAGAATACTCCGGCGGCCAAGTCCTATTTGGAGTGTCA
CGTCGTTGTCGTACTTGAGCGTCTTCCATATACCCCGCACTCTGATCTAA
ATAGTGATAGTCGTTGTTTCTTTGTCCACCAAAGCCGTCAGAAATCACGA
AACGTATGTCAAGATATCCTTTCTGTAAATCCTGTGAGCCTGTCCCAATC
CATCCTCCAGAGTTTTATACTCCCATGCCTTGGCGGCAGCCGAGCTCTGT
CACCAAGCCAATTCTTTGTGCCATACTCACTGAAAGTACCCCCCGCGCGC
GCTACCCTCCTGAGGCCATGGAAGAGTTCATGCGGTATATCCTGTGCGCT
TTTTGAAGAGTTCGCACCTAGGAAGTTGCTAAACTGGTAGTTGTAACGCT
ATAGAGCAAACATACTAATGACCATAATCCATCAGGAGTATATGAGCAGA
TTATTCTCCAAGTGTATCACATACGAAGCGACATTGCTGATACGTGCGCG
CGAAGATCAAGGTTCTCTACATTGCTGGGGTATAGTTACACCTGCCGAGT
GTGCAACATTTGGTCGCCCGGGATGGCCAAAAGCCATGGCTGAATCCTGT
TGGCGTAGCAAGGCAAGGGTGATCTTCAATGGCTAGTATTACTCCTGAAA
AACGCGACTCGCCCCCGAAAACCCAGCATGCTTCATCTGATCATTGTAGC
GGTTCAAGGTCAGCTGTGGAGAGACTAGATCATGCGTTTCCATGAGAACA
CCTCCCCCCCCGTCTCATCGCCCATGTTGCATGCTGTTGCCGCAGGGCCT
CCTTCATGTCTAAAATGATCATGGTTGAGGGCAAGCCGATGAAATTTCAG
GTGAGCGGAACTAGCGGATTCATGTTGATTCCCAGGTTTCCGGGAACTCG
TTTCCGACGTTGATATCGTGTGTGTTAGTCGTCTGCCTGCAGTACTGCTG
GCGCATATAGCGTCGTTGTACGTGCAGACCGACCAAGTACTCGATGGTTG
CAGGTACTGTGCAATGGCGCTTAAAACTAATGCTGTCTGTTTCCCGTGCT
TTTTGTTGCCTCCCATTCGCCCCTACTCAAGTAGGTCTGATGCCATGAGT
AGATTTGCACCTACTGGTTCGTTATTGTTACTGTTAAGCATGTAACTCCA
GACTGTGATGAGCAAAGCAGCCCAAGTTCCATTTCCGCTTACGGAAGACA
TTTCCATCGAAGCACTACTTCTGTGAGCCCAGTGTATATTCCAGGATTTG
CCCGTTTGTTCTCCATCGGTTCCACCAACCCTTGAGCGTAGTTCTTCTGA
TTACAGACGGGGAAACGAATTGATTAAACTTTCCAGACCTTCGTTTTAGT
ACGCATCCTCACCACCACGGCCACGATCAAGCTCTGCTAAGAAACCCTTC
TCGCTGCAACCGTTTCTTGCCCGTGTGACAGATTTGGGATACTGCCGGGC
AGGAGAAGTATCACAGCTTGGCGCCGATGTACTATCGAGGGGCGGGCGCT
GCAATCGTAGTTTACGACATCACCAAGATTCATTCCTTCCGCACGTTGAA
AGAGTGGATAAACGAGTTGCGGGCGCAGGGGCCGCAGGACATAACAATCG
CCATCGCTGGCAACAAGCGAGACTTGGAGGCCGATCGAGTGAGTGAAAGG
AGACCTCGTACAAGATTCATCGCTGATGTTCTATGCCAGCGCAAACACAT
GAAGACCCCATTTGTAATTGGTTCAGCCTCCGGACAAGAACGAATAGAGC
ACTCGCAACTATCTCGAACTATCATTATTTGTCTTGGGTAAACGCGTGTT
TATTCATTTACAAGCCTATGAATTGTCGCTCTTTAGATGCTCACTAGGTG
GTCGTATACCCGGCGAACAGTCACACATATATATCCTGTTTATTTTCGGG
GATGGTACTGTACAAATTGTATACTCTTTCTGCCCGAGCGTTTCGATGCT
CCATGGTATTTTGAGTACACTGCCTATTATTCGCGTCACATGGACATCTG
TCCCAACTCAAACTGATACAATATCCATTCCAGATTTCTCGTATTTATTT
GTGTCTTTTATTCGTTTTTGTGCGGGAGGTGAATTGTTTATACTGGGTAG
TACTTGGTATACAGGCCACGGCGATGCAGTGGCGTGCCACTTTAAAATAT
GTTATGGAAATCGTGTTGAAAGAAACGTCATCATTGGCGTATTAGTTCAT
AGAGGATTTGAAGAAATAACAGTAGCACCAGTTTTTGGTGTTGTTACAAA
GATCTCGTCCGCTCAGTTTTGCAGATTCAAGCCCTGTGATACTGTGTAGT
GCACTGTTTAGCGGGGGATATCGTGGCTGGATTACTTTGTCGCACCCTTA
TCCCGTGGATTATGACACCATCGTTGAAAGAGAAATATTCCCGGATGCTG
TTGCCCATTTTCTCATGGGCCATTGTGTCTCACTGTTGACCGGCCCCAGT
GTATTTCGTGTCTTTTTCGCGTCCAAAACTTGACACATGGATTGCCGCTT
CCTTCTCACGTAAAGGCGAGCTAATTTGCCAGTGTTAACTCTTGTCGGGC
CCAGGACTACTCCAGTCCTCCATGTCAAGCGTTTGTATAGAACAGGTACC
TGAACCATGACTCAACAGCTGCAGGTGCAACGGAAGCGACGTCGAGATCA
TAGTCGAGGTCGTTCTCCGTAGTTCCCCGTGTTGGTTCATAGGCAGCAAG
AACATTTTCACCTTTGCATATTTTCCTTCTGCAACAACGTCATATGCTAG
CAAGGGTTGGGTAGGCAGTGTCTTTTCTCGAACGATGTATTGAGAATGTA
CAAAAACCGGAGTAAACGTACGTCCTAATGTCAGACAGTAAGATCGAAGT
ATTTTTTACGCAAGTATGTTTCAATTTCACATGTTCTATGAAGATACCCG
GTGTTGGGCCCCGTGCTGTCCTCTTTCCTGCGACCCCTCCCCACAGGAGG
TAGAGAGTTCGATGGCTCGAGCATATGCAGATGAAATCGGGGCCATGTTT
GTAGAGACGAGCGCAAAGGAGGACACACATGTGCAAGATATCTTCGTCGA
GCTTAGTAAGCGGCTGCCAGCGAGGGAACCTCCGCCGCCTCCGTCGGACA
CCCTCAGCCTGGAAGCCACTGGCGGTGCATCGTCCAGTTGCTGTTGATGG
TCCTGTCTGCCTCTGTTGGGATGTTTTTATTCCGTCATTTTAATCTCGTT
GCTAGCTTTTTTGTAATTCTTTTCTGCTGGTTGTAGGGGGGAAGGGGTTC
GGATATATGTTTATGGTGGGTGACCAAGCTTTGGTCGCAATTTGTTGAAC
GAGAAATATTGGGGGGGATCTGCAGGGTGTTTTGGACAGTACCTCGACCG
AGGGGGCATTGTGATTGCTGCATTATGTGTACTGGGAGATGGTGCTAGCG
TGCGGGAGGAAGATCTGTACTGTGTATTTTATTATTGCGAACGCCTCTCT
GACGGTGTTTGGCACATCCTTGATCACGAGGGGCAGACGAGCGCAGTTTG
GTGGTTTTTGCTTGCATGCTCCAGGCCAACGTCGGTGCTGAGGATGGTGT
ACCTCTCCATATTCTTGGTTTGCCGGTCGTGGAGCATCTTTGTCCTTTTG
TGTATCCATGTATGTATTCAGGACAGGAAGGTTCTATCGTGCACATCCGC
TCGATGTTTGCGAATTCGATGGTAATACTCGCGTGCTCTTTCTGGATAAC
TTTCGATAGCACATGTATTTTATCAAGGCGCAGGAAGGGTTGATGGGACC
TTTTTCCTGCCGCCATAAAAGGATCATAGGCAGGAGATCGAGCATCTACC
AATGTACAAAGAAAAGGGGGTGGAATATTTCATGTCCACCGATTAACTTT
CTGCCACAACTCAAGGAATCGGATTTTCCGAAATTGGTTATCTCTGGTGT
GTGATTTTTTCGGTTTTTTGTCACTAGTATACTAATTTGAATTATGCGCC
GCTTCTTTAACCCTTCA
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Coding sequence (CDS) from alignment at H-paniculata_contig930:24135..28451-

>mRNA_H-paniculata_contig930.17082.1 ID=mRNA_H-paniculata_contig930.17082.1|Name=mRNA_H-paniculata_contig930.17082.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=906bp|location=Sequence derived from alignment at H-paniculata_contig930:24135..28451- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTAAAATGATCATGGTTGAGGGCAAGCCGATGAAATTTCAGATGTC
TAAAATGATCATGGTTGAGGGCAAGCCGATGAAATTTCAGATTTGGGATA
CTGCCGGGCAGGAGAAGTATCACAGCTTGGCGCCGATGTACTATCGAGGG
GCGGGCGCTGCAATCGTAGTTTACGACATCACCAAGATTCATTCCTTCCG
CACGTTGAAAGAGTGGATAAACGAGTTGCGGGCGCAGGGGCCGCAGGACA
TAACAATCGCCATCGCTGGCAACAAGCGAGACTTGGAGGCCGATCGAATT
TGGGATACTGCCGGGCAGGAGAAGTATCACAGCTTGGCGCCGATGTACTA
TCGAGGGGCGGGCGCTGCAATCGTAGTTTACGACATCACCAAGATTCATT
CCTTCCGCACGTTGAAAGAGTGGATAAACGAGTTGCGGGCGCAGGGGCCG
CAGGACATAACAATCGCCATCGCTGGCAACAAGCGAGACTTGGAGGCCGA
TCGAGAGGTAGAGAGTTCGATGGCTCGAGCATATGCAGATGAAATCGGGG
CCATGTTTGTAGAGACGAGCGCAAAGGAGGACACACATGTGCAAGATATC
TTCGTCGAGCTTAGTAAGCGGCTGCCAGCGAGGGAACCTCCGCCGCCTCC
GTCGGACACCCTCAGCCTGGAAGCCACTGGCGGTGCATCGTCCAGTTGCT
GTTGAGAGGTAGAGAGTTCGATGGCTCGAGCATATGCAGATGAAATCGGG
GCCATGTTTGTAGAGACGAGCGCAAAGGAGGACACACATGTGCAAGATAT
CTTCGTCGAGCTTAGTAAGCGGCTGCCAGCGAGGGAACCTCCGCCGCCTC
CGTCGGACACCCTCAGCCTGGAAGCCACTGGCGGTGCATCGTCCAGTTGC
TGTTGA
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