prot_H-paniculata_contig9290.17074.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9290.17074.1
Unique Nameprot_H-paniculata_contig9290.17074.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length163
Homology
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: D7FY49_ECTSI (Similar to collagen, partial n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY49_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 2.990e-48
Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVREARDLINAQDGTAAFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELD 162
            VN+A+++D SGS+ + DW L KEFA+N V +FA +NLF NGG+AS+ QF+S     GTF + + F  F D DV+  GGTDI  G+ + R+L++A     +FMIV TDG   DP  EADAARAEGTI++AVGVG+  S   LLAIGGDE+NVF++ +F+ELD
Sbjct:   74 VNVAVIIDASGSVGTADWELSKEFAKNTVASFAEQNLFTNGGSASFAQFASDASEGGTFYSLEDFNAFVDADVKHSGGTDIIDGIAKGRELLSASPAATSFMIVTTDGAAPDPQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELD 234          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: A0A6H5JRK3_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK3_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 3.670e-46
Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVREARDLINAQDGTAAFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELD 162
            VN+A+++D SGS+ + DW L KEFA+N V +FA +NLF NGG+AS+ QFSSS    GTF + + F  F D D +  GGTDI  G+ + R+L++A     +FMIV TDG   DP  EADAARAEGTI++AVGVG+  S   LLAIGGDE+NVF++ +F+ELD
Sbjct:   91 VNVAVIIDASGSVSTADWELSKEFAKNTVASFAEQNLFTNGGSASFAQFSSSASEGGTFYSLEDFNAFVDADAKYSGGTDIIDGIAKGRELLSASPAATSFMIVTTDGAAPDPQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELD 251          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: A0A6H5JR61_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR61_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.480e-44
Identity = 85/165 (51.52%), Postives = 116/165 (70.30%), Query Frame = 0
Query:    1 QVNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQG---GGGTDIEVGVREARDLINAQDGTAAFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELD 162
            QVN+A+++D SGS+ + DW L  EFA+N V +FA +NLF NGG+AS+ QFSSS    GTF + + F  F D + +    GG T+I  G+ + R+L+ A   T ++MIV TDG    P  EADAARAEGTI++AVGVG+  +  TLLAIGGDE+NVF++ +F+ELD
Sbjct:  107 QVNVAVIIDSSGSVSTADWELSMEFAKNTVASFAEQNLFTNGGSASFAQFSSSASEGGTFYSLEDFDAFVDAETKYATFGGSTNIISGIAKGRELLGASPTTTSYMIVTTDGEADSPQDEADAARAEGTIMYAVGVGSVPTAETLLAIGGDEANVFDVDNFEELD 271          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: D7FHN6_ECTSI (Glycin-rich protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHN6_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 2.810e-44
Identity = 87/161 (54.04%), Postives = 116/161 (72.05%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVREARDLINAQDGTAAFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELD 162
            VN+A+++D S S+ + DW L KEFA+N V +FA++NLF NGG+AS+ QFSS     GTF + + F  F D D +  GGTDI  G+ + R+L++A   T +FMIV TDG   DP  EADAARAEGTI++AVGVG+  S   LLAIGGDE+NVF++ +F+ELD
Sbjct:   81 VNVAVIIDASVSVGTADWELSKEFAKNTVASFAQQNLFTNGGSASFAQFSSDASEGGTFYSLEDFNAFVDADAKYSGGTDIIDGIAKGRELLSASPTTTSFMIVTTDGVAPDPQDEADAARAEGTILYAVGVGSGPSQENLLAIGGDEANVFDVDNFEELD 241          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: D8LLU2_ECTSI (Similar to integrin alpha Hr1-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU2_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 5.080e-42
Identity = 83/162 (51.23%), Postives = 110/162 (67.90%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQ-GGGGTDIEVGVREARDLINAQDGTAAFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELD 162
            VN+A+++D SGS+   +W +   FA++AV +FA +NLF NGG+AS  QFSSS    GTF + + F  F DG+ +   GGTDI  G+ + R+L+ A   T +FMIV TDG    P  EADAAR EGTIV+AVGVGT  +   LL IGG+E+NVF++  FDELD
Sbjct:   60 VNVAVIIDSSGSVDDDEWDMSMAFAKDAVSSFADQNLFTNGGSASIAQFSSSASEGGTFYSLEDFNAFVDGNTKYSSGGTDIIDGIAKGRELLKASPATTSFMIVTTDGQSSSPKAEADAARDEGTIVYAVGVGTGPTQEILLDIGGEEANVFDVDGFDELD 221          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: A0A6H5KCW7_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 6.330e-41
Identity = 86/164 (52.44%), Postives = 114/164 (69.51%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVREARDLINAQDGTAAFMIVITDGNG-GDPAPEADAARAEGTI-VFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELDS 163
            VN+ IV+DGSGSIVS DWILE++FA++ V AFARRN+F NGGTASYVQFS+S    GTF + + F    D  +Q GG TDI  G+   R L+N    + +FM++ITDG    DP+  A   RA+ T  +FAVGVG+++ST TLL I G+ESNVF + +F  L++
Sbjct:   50 VNVVIVVDGSGSIVSSDWILEQQFAKDTVAAFARRNIFDNGGTASYVQFSTSTYDEGTFTSTESFDEHVDSVIQWGGDTDIADGIIAGRALLNENPASFSFMVLITDGESYTDPSTAAQETRADNTTTIFAVGVGSQISTETLLDIAGEESNVFSVTNFSSLEA 213          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 2.110e-40
Identity = 85/162 (52.47%), Postives = 111/162 (68.52%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQ-GGGGTDIEVGVREARDLINAQDGTAAFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELD 162
            VN+A+++D SGS+ S +W +   FA+NAV +FA +NLF NGG+AS  QFS+S    GTF + + F  F DG  +    GT+I  G+ + R+L+NA   T +FMIVITDG    P  EADAARAEGTIV+AVGVG+  + S LL I GD+SN F + DFDELD
Sbjct:   60 VNVAVIIDSSGSVNSDEWDMSIAFAKNAVSSFADQNLFTNGGSASIAQFSNSASEGGTFYSLEDFNDFVDGSTKYQSQGTNIIAGIAKGRELLNASPTTTSFMIVITDGQSSSPKDEADAARAEGTIVYAVGVGSGPTESVLLDIAGDDSNKFSVDDFDELD 221          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: D7G513_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G513_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.670e-38
Identity = 86/169 (50.89%), Postives = 117/169 (69.23%), Query Frame = 0
Query:    1 QVNLAIVLDGSGSI--VSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVREARDLI-NAQDGTAAFMIVITDGN---GGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELDS 163
            +VN+A+++D SGSI  + G ++LEKEFA+N   +FA +NLF NGGTASY  FS +    GTF ++  F  F D      G T+IE G+ + R+L+ N      +F+I+ITDG+   GGDP  EADAAR EGTIV+AVGVG +VS +TLL+IGGD +NVF+  +F ELD+
Sbjct:   66 KVNVAVIIDSSGSIFDIDGAFLLEKEFAKNVAASFAAKNLFTNGGTASYASFSDAASDGGTFGSEAEFNEFVDNASWIEGDTNIEAGLSKGRELLANGTSTRTSFLILITDGDWNRGGDPQIEADAARDEGTIVYAVGVGPDVSEATLLSIGGDLTNVFDASNFTELDN 234          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: UPI0015FF590C (uncharacterized protein LOC118404903 n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0015FF590C)

HSP 1 Score: 69.3 bits (168), Expect = 1.130e-10
Identity = 59/168 (35.12%), Postives = 82/168 (48.81%), Query Frame = 0
Query:    2 VNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVRE-ARDLINAQDGTAA----FMIVITDGNGGDPAPE-ADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDFDELDS 163
            ++L  +LDGSGS+   ++ L K+F +N V  F  +    + G   Y        +  T+D      +  D      GGT+    ++  A D   A  G       F+IV+TDG   D   + AD  R  G  VFAVGVGT+V   TLLAI  D   VF+IGDF+ L+S
Sbjct:  253 IDLMFLLDGSGSVTKTNFDLVKQFVKNIVQNFDIQPGTTHVGVLQYSTTVKEHFALNTYDRSAQVLSAIDRIQYMQGGTNTGAALQYLAHDSFTAAKGGHPNHQNFVIVVTDGKSSDSVMQPADELRKMGVKVFAVGVGTQVDNDTLLAIATDPKKVFQIGDFEGLNS 420          
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Match: A0A8J9YT76_BRALA (COL6A3 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9YT76_BRALA)

HSP 1 Score: 68.2 bits (165), Expect = 2.890e-10
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 0
Query:    3 NLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQFSSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVR-EARDLINAQDGTAA----FMIVITDGNGGDP-APEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDESNVFEIGDF 158
            +LA++LDGSGS+ + ++ L K+FA+  V  F         G   Y   S+       F T+       DG V   GGT+    +    +++  + +G  A     ++V+TDG   D  A  A +AR EGT+++AVGVG  V+ +TLL I G  + V +  DF
Sbjct: 5193 DLALLLDGSGSVGADNFNLVKQFAKRLVDNFEISQTDNKVGVVQYSSSSNVEFYLNAFSTKQPVLDAIDGIVYQQGGTNTGAAITFTMQEIFASANGARANYPDILVVVTDGESSDDVAAPALSARNEGTLIYAVGVGNGVNQATLLQIAGSAAQVLQAADF 5354          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9290.17074.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY49_ECTSI2.990e-4854.04Similar to collagen, partial n=2 Tax=Ectocarpus si... [more]
A0A6H5JRK3_9PHAE3.670e-4654.66VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JR61_9PHAE1.480e-4451.52VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHN6_ECTSI2.810e-4454.04Glycin-rich protein n=1 Tax=Ectocarpus siliculosus... [more]
D8LLU2_ECTSI5.080e-4251.23Similar to integrin alpha Hr1-like n=1 Tax=Ectocar... [more]
A0A6H5KCW7_9PHAE6.330e-4152.44VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JNZ2_9PHAE2.110e-4052.47VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G513_ECTSI1.670e-3850.89VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
UPI0015FF590C1.130e-1035.12uncharacterized protein LOC118404903 n=1 Tax=Branc... [more]
A0A8J9YT76_BRALA2.890e-1032.72COL6A3 protein n=1 Tax=Branchiostoma lanceolatum T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 1..163
e-value: 4.9E-12
score: 56.0
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 3..162
e-value: 5.0E-17
score: 62.7
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 3..163
score: 15.976
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410coord: 1..163
e-value: 4.8E-26
score: 93.7
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 2..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9290contigH-paniculata_contig9290:165..1744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9290.17074.1mRNA_H-paniculata_contig9290.17074.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9290 165..1744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9290.17074.1 ID=prot_H-paniculata_contig9290.17074.1|Name=mRNA_H-paniculata_contig9290.17074.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp
QVNLAIVLDGSGSIVSGDWILEKEFAQNAVGAFARRNLFGNGGTASYVQF
SSSVISSGTFDTQDGFRTFSDGDVQGGGGTDIEVGVREARDLINAQDGTA
AFMIVITDGNGGDPAPEADAARAEGTIVFAVGVGTEVSTSTLLAIGGDES
NVFEIGDFDELDS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf