prot_H-paniculata_contig9284.17067.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9284.17067.1
Unique Nameprot_H-paniculata_contig9284.17067.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length216
Homology
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: D7G373_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G373_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 2.340e-99
Identity = 158/209 (75.60%), Postives = 180/209 (86.12%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIPVL 209
            ME+HP H + DP+ VAR+SK+I  LEE+VRQGWK E+KLKQPAWDEFLA+CRVL RYDALKD +     TPTAFGR+VG+INA+N+LWMALVLTR +I  LG+TELASLMPAI+NEY+RPD  TLYG SE V  FL+EL PVASELSEIQ+LEQ + PVRLDG LCGLVEGWA+GCDWSELV STSLDQGDLCRILRR ME+LRQIPVL
Sbjct: 1104 MENHPVHQVEDPESVARLSKEIISLEEQVRQGWKTEQKLKQPAWDEFLAVCRVLKRYDALKDAEVS---TPTAFGRMVGSINAENELWMALVLTRKSILQLGYTELASLMPAILNEYTRPDLFTLYGPSEGVSAFLEELAPVASELSEIQMLEQVEQPVRLDGKLCGLVEGWANGCDWSELVASTSLDQGDLCRILRRAMEMLRQIPVL 1309          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A6H5L415_9PHAE (DSHCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L415_9PHAE)

HSP 1 Score: 302 bits (774), Expect = 5.120e-96
Identity = 158/243 (65.02%), Postives = 179/243 (73.66%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKD---------KDDGQG-------------------------PTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIPVL 209
            ME+HPAH + DP+ VAR SK+I  LEE   QGWK E+KLKQPAWDEFLA+CRVL RYDALKD         ++DG                           P PTAFGR+VG+INA+N+LWMALVLTR +I  LG+TELASLMPAI+NEY+RPD  TLYG SE V  FL+EL PVASELSEIQ+LEQ + PVRLD  LCGLVEGWA+GCDWSELV STSLDQGDLCRILRR ME+LRQIPVL
Sbjct:  332 MENHPAHHVEDPESVARQSKEIISLEE---QGWKTEQKLKQPAWDEFLAVCRVLKRYDALKDAEVSTDASGEEDGAAAXXXXXXXXXDKKADSKRAKKKWGEPKPTAFGRMVGSINAENELWMALVLTRKSILQLGYTELASLMPAILNEYTRPDLFTLYGPSEGVSAFLEELAPVASELSEIQMLEQVEQPVRLDSKLCGLVEGWANGCDWSELVASTSLDQGDLCRILRRAMEMLRQIPVL 571          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A835Z819_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z819_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.110e-65
Identity = 118/224 (52.68%), Postives = 153/224 (68.30%), Query Frame = 0
Query:    1 MESHPAHSIGD--PDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPT-------------PTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIPVL 209
            +E+HP H + +   +EV   SK I  LE++VR GW+ E K +QPAWD+F++I RVL+RY AL  +D  Q                 TAFG LVG INADN+LW+ALVLT   I++L   +LA L+PAII+EYSRPD   LYG SE V   ++ L P+A+EL+ +Q+    D+PV+LD  L GLVE WA GCDW+EL  STSLDQGD+CR+LRRTME+LRQI +L
Sbjct:  904 LEAHPLHGLDNVTKEEVLNASKDISALEDQVRNGWRSELKFRQPAWDDFVSITRVLIRYGALLPEDLSQESDVEDVGSNEKLRLRSTAFGDLVGGINADNELWLALVLTSSAIKALSDVQLAGLVPAIISEYSRPDMFNLYGVSEEVSLCVEALVPLATELTTVQLENAVDLPVKLDASLGGLVESWALGCDWAELCASTSLDQGDICRLLRRTMEVLRQIALL 1127          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A1Z4JAL9_LEPBY (DSH-like protein n=5 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A1Z4JAL9_LEPBY)

HSP 1 Score: 148 bits (374), Expect = 1.410e-37
Identity = 80/207 (38.65%), Postives = 117/207 (56.52%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIP 207
            +E+HP H  GD  ++ +  K+I  L+ ++    +   +  Q  W+EF+A+  VL ++  L D       TPT  G    AI  DN+LW+ L L   ++  L    LA+   A++ E SRPD+ T Y  SE V+  L EL  V  +L ++Q   Q  +PV L+  + GLVE WA G DW EL  +TSLD+GD+ R+LRRT++ L QIP
Sbjct:  659 LEAHPVHQWGDRPQIIKRQKRIEMLQSEIDDRQEKLDRQSQRHWEEFVALIEVLRKFGCLDDL------TPTILGEATAAIRGDNELWLGLALMSHDLDHLDPHHLATACAALVTEVSRPDSWTRYDVSEPVLEALSELRRVRRQLFQVQRRYQVVLPVWLEDEMVGLVEQWALGVDWLELCKNTSLDEGDVVRLLRRTLDFLSQIP 859          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A8J8CIT6_9CYAN (DEAD/DEAH box helicase n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J8CIT6_9CYAN)

HSP 1 Score: 148 bits (373), Expect = 1.930e-37
Identity = 84/217 (38.71%), Postives = 122/217 (56.22%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIPVL--VSESWR 215
            ME+HP +S GD  ++ +  ++I  L+ +V+       +  Q  W+EFLA+  +L  +  L D        PTA G+   AI  DN+LW+ L L    +  L    LA+   A++ E SRPD+ T Y  SE V+  L EL  +  +L ++Q   Q  +PV L+  L GL+E WA G DW EL  +TSLD+GD+ RILRRT++ L QIP +  +SE  R
Sbjct:  662 MEAHPVNSWGDRAQILKRQRRIQGLQAEVQDRQTKLGRQSQRHWEEFLALLDILQSFGCLDDL------RPTALGQATAAIRGDNELWLGLSLMSGELDHLDPHHLATACAALVTEVSRPDSWTHYDTSETVLQALGELRGIRRQLFQVQRRHQVALPVWLEDELIGLIEQWALGVDWLELCSNTSLDEGDVVRILRRTLDFLSQIPHVPHISEILR 872          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A0P4US24_9CYAN (Putative helicase n=8 Tax=Cyanobacteria TaxID=1117 RepID=A0A0P4US24_9CYAN)

HSP 1 Score: 147 bits (370), Expect = 4.870e-37
Identity = 86/219 (39.27%), Postives = 123/219 (56.16%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKV--RQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIPVL--VSESWR 215
            ME+HP H  G+  +  +  ++I  L E++  RQ  K++ K  Q  WDEF+A+  +L R+  L D       TPTA G    AI  DN+LW+ L L    +  L     A+   A++ E SRPDT   Y  S+ V+  L  L  +  +L ++Q   Q  +PV L+  L G+VE WA G DW EL  +TSLD+GD+ RILRRT+++L QIP +  V E+ R
Sbjct:  659 MEAHPVHEWGNRPQTLKRQRRIETLREEISDRQA-KLDEKT-QRHWDEFVALIEILRRFGCLDDL------TPTALGESTAAIRGDNELWIGLALMSGELDPLDPHHFAAACAALVTEVSRPDTWIRYDVSDPVLEALGGLRSIRRQLFQLQRRYQVALPVWLEDELVGIVEQWALGADWGELCSNTSLDEGDVVRILRRTLDLLSQIPHMPHVREALR 869          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A7S2DG78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DG78_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.790e-36
Identity = 81/196 (41.33%), Postives = 120/196 (61.22%), Query Frame = 0
Query:   17 RISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGC-DWSELVDSTSLDQGDLCRILRRTMEILRQIPVLVS 211
            R++KQ    E++V  G ++        W++FLA+  VL R+ A+    DG    PT  G LVG+ N+DN+LW+AL+LT P ++ L   ELASL+ A++ +Y+RPDT   +G S  V    + L  +A  L + Q+    D PV+L G   GLVE WASG   W++L  STS++QGD+C +LRRTME+LR +  + +
Sbjct:  900 RLAKQKKRREKQVEAGSQV--------WEDFLAMRDVLERFSAI----DGDNK-PTDLGLLVGSANSDNELWLALILTSPCVRRLSAPELASLISAVMIQYTRPDTFVAFGPSAAVTIAAESLRELAETLYDAQVEFDVDCPVQLAGSYAGLVESWASGLVTWNQLTSSTSMNQGDVCTMLRRTMEVLRSMTSIAA 1082          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A1D2PB61_9CYAN (DSHCT domain-containing protein n=1 Tax=Scytonema millei VB511283 TaxID=1245923 RepID=A0A1D2PB61_9CYAN)

HSP 1 Score: 134 bits (337), Expect = 2.630e-35
Identity = 69/207 (33.33%), Postives = 116/207 (56.04%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIP 207
            +E+HP H  G+   + +   Q+  LE +++Q     ++  Q  W+EFL +  +L  ++ L +        PT  G++  AI  +N+LW+ LV     + +L    LA+ + A++ E  RPD+M  +  SE V+  L  L  +  ++ ++Q      +P+ L+  L  LVE WA G +W EL ++TSLD+GD+ RILRRT+++L QIP
Sbjct:   19 LEAHPLHQSGNAASIFKRRTQVAELEGEIQQMQAQVQQQSQRNWEEFLNLIEILQYFECLDNL------VPTRLGQIAAAIRGENELWLGLVFASGELDNLDPHHLAAAIAALVTETPRPDSMVRFDLSEEVLEALSRLRGIRRKMFQLQRRYNVALPIWLEFELIALVEQWALGMEWVELCENTSLDEGDVVRILRRTLDLLSQIP 219          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: A0A3M9Z168_9CYAN (RNA helicase n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A3M9Z168_9CYAN)

HSP 1 Score: 141 bits (356), Expect = 3.700e-35
Identity = 76/207 (36.71%), Postives = 116/207 (56.04%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIP 207
            ++ HP HS+G P  + +  K+I  +++++    +   +  Q  W EFL++  +L  +  L+D        PT  G++  AI  DN+LW+ L L    + +L    LA+   A++ E SRPD  T Y AS  V   L EL  +  EL ++Q   Q  +PV L+    GLVE WA G +W+EL  +TSLD+GD+ RILRRT++ L Q+P
Sbjct:  653 LKDHPLHSVGHPTYLLKRQKRIERMQDELASRRQKLSQHSQRYWQEFLSLMEILQAFGCLEDAK------PTPLGQVAAAIRGDNELWLGLALASGELDTLDPHHLAAACAALVTEVSRPDNWTRYDASLEVETALGELRSIRRELFKLQRRHQVALPVWLETEWMGLVEQWALGVEWTELCANTSLDEGDVVRILRRTVDFLSQVP 853          
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Match: UPI0019EED178 (DEAD/DEAH box helicase n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019EED178)

HSP 1 Score: 141 bits (355), Expect = 5.050e-35
Identity = 80/209 (38.28%), Postives = 116/209 (55.50%), Query Frame = 0
Query:    1 MESHPAHSIGDPDEVARISKQIFPLEEKV--RQGWKIERKLKQPAWDEFLAICRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQSLGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTMEILRQIP 207
            M+ HP H+ GD  +V +  +++  LEE++  RQG  +  K  Q  W EFL +  +L  +  L+D        PT  G    AI  DN+LW+ L L       LG   LA+   A++ E SRPDT T YG SE  +  L+ +  +  ++ + Q   +  +PV  +  L GLVE WA G +W EL ++TSLD+GD+ RILRRT++ L QIP
Sbjct:  659 MDEHPMHTWGDRGKVQKQQRRLVRLEEELDDRQGKLV--KQSQQRWQEFLGLIEILEHFGCLEDFK------PTRLGEATAAIRGDNELWLGLALMSGEFDHLGPHHLAACCAALVVEVSRPDTWTRYGISENTLEALEGVRGIRRQVFQQQRRREIMLPVWFELDLIGLVEQWALGTEWLELCENTSLDEGDVVRILRRTLDFLSQIP 859          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9284.17067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G373_ECTSI2.340e-9975.60DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5L415_9PHAE5.120e-9665.02DSHCT domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z819_9STRA2.110e-6552.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z4JAL9_LEPBY1.410e-3738.65DSH-like protein n=5 Tax=Leptolyngbyaceae TaxID=18... [more]
A0A8J8CIT6_9CYAN1.930e-3738.71DEAD/DEAH box helicase n=1 Tax=Myxacorys almedinen... [more]
A0A0P4US24_9CYAN4.870e-3739.27Putative helicase n=8 Tax=Cyanobacteria TaxID=1117... [more]
A0A7S2DG78_9STRA1.790e-3641.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1D2PB61_9CYAN2.630e-3533.33DSHCT domain-containing protein n=1 Tax=Scytonema ... [more]
A0A3M9Z168_9CYAN3.700e-3536.71RNA helicase n=2 Tax=Pseudanabaenales TaxID=288137... [more]
UPI0019EED1785.050e-3538.28DEAD/DEAH box helicase n=1 Tax=filamentous cyanoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012961ATP-dependent RNA helicase Ski2, C-terminalSMARTSM01142DSHCT_2coord: 66..214
e-value: 7.1E-14
score: 62.1
IPR012961ATP-dependent RNA helicase Ski2, C-terminalPFAMPF08148DSHCTcoord: 70..208
e-value: 2.7E-22
score: 79.2
NoneNo IPR availableGENE3D1.10.3380.30coord: 39..206
e-value: 6.1E-22
score: 80.3
NoneNo IPR availableGENE3D1.20.1500.20coord: 2..38
e-value: 6.1E-22
score: 80.3
NoneNo IPR availablePANTHERPTHR14074:SF34coord: 43..211
NoneNo IPR availablePANTHERPTHR14074HELICASE WITH DEATH DOMAIN-RELATEDcoord: 43..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9284contigH-paniculata_contig9284:3497..8300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9284.17067.1mRNA_H-paniculata_contig9284.17067.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9284 3473..8300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9284.17067.1 ID=prot_H-paniculata_contig9284.17067.1|Name=mRNA_H-paniculata_contig9284.17067.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=216bp
MESHPAHSIGDPDEVARISKQIFPLEEKVRQGWKIERKLKQPAWDEFLAI
CRVLMRYDALKDKDDGQGPTPTAFGRLVGAINADNQLWMALVLTRPNIQS
LGHTELASLMPAIINEYSRPDTMTLYGASERVIGFLDELGPVASELSEIQ
ILEQADIPVRLDGMLCGLVEGWASGCDWSELVDSTSLDQGDLCRILRRTM
EILRQIPVLVSESWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012961Ski2_C