prot_H-paniculata_contig9281.17066.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9281.17066.1
Unique Nameprot_H-paniculata_contig9281.17066.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length209
Homology
BLAST of mRNA_H-paniculata_contig9281.17066.1 vs. uniprot
Match: D7FYY4_ECTSI (Origin recognition complex subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY4_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 1.740e-38
Identity = 80/185 (43.24%), Postives = 116/185 (62.70%), Query Frame = 0
Query:   27 GKRKVKGPALLIKRYVDPNSKHVYYGQVTVG------GETYSCGECVAMETAEGTFVAEVLYIFKDQHGQAWVENRWLFNKQEVQEALPKRIWPEMEDAELLETNEVTSNPASAIVHKVAVLDETDFRDRVRRGMLN----ENRDFFCTKYLDTNYHRFMPAGAQGPDQRLRRGRRFSDRYDGPD 201
            G+RKV   ++L K + +  +   YY +V VG       ETY CG+C  +ET  G + AE+++IFKD+HG+ WVE RWL+ K+E++E +PKR WP+M+DAELLETN+V +N  ++I + V V     +  + + G ++    E RDFFC K+ D    RFMP   Q   QRL RGRR+S+R   P+
Sbjct:  213 GERKV---SMLRKTWTN-EAWDTYYTEVRVGDSGGGGSETYRCGDCAVLETDSGKYPAEIVHIFKDRHGEEWVEVRWLYTKEEIEETVPKRWWPDMDDAELLETNDVIANHPASICYPVRVHSHEHYMQKEKAGEIDVDTAEPRDFFCRKFYDVRLKRFMPEAEQRTAQRLLRGRRWSERSSKPE 393          
BLAST of mRNA_H-paniculata_contig9281.17066.1 vs. uniprot
Match: A0A6H5JHQ6_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ6_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.540e-33
Identity = 67/158 (42.41%), Postives = 98/158 (62.03%), Query Frame = 0
Query:   27 GKRKVKGPALLIKRYVDPNSKHVYYGQVTVGG------ETYSCGECVAMETAEGTFVAEVLYIFKDQHGQAWVENRWLFNKQEVQEALPKRIWPEMEDAELLETNEVTSNPASAIVHKVAVLDETDFRDRVRRGMLN----ENRDFFCTKYLDTNYHR 174
            G+RKV   ++L K + +  +   YY +V VGG      ETY CG+C  +ET  G + AE+++IFKD+HG  WVE RWL+ K E++E +PKR WP+M+DAELLETN+V +N   +I + V V     + ++ + G ++    E RDFFC K+ D    R
Sbjct:   82 GERKV---SMLRKTWTN-EAWETYYTEVRVGGSGGGGSETYRCGDCAMLETDSGKYPAEIVHIFKDRHGDEWVEVRWLYTKAEIEETVPKRWWPDMKDAELLETNDVIANHPGSICYPVRVHSHEHYMEKEKAGEIDVDTTEPRDFFCRKFYDVRLKR 235          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9281.17066.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYY4_ECTSI1.740e-3843.24Origin recognition complex subunit 1 n=1 Tax=Ectoc... [more]
A0A6H5JHQ6_9PHAE2.540e-3342.41BAH domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001025Bromo adjacent homology (BAH) domainPFAMPF01426BAHcoord: 59..175
e-value: 1.2E-7
score: 31.6
IPR001025Bromo adjacent homology (BAH) domainPROSITEPS51038BAHcoord: 52..179
score: 13.452
NoneNo IPR availableGENE3D2.30.30.490coord: 38..193
e-value: 4.3E-18
score: 67.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9281contigH-paniculata_contig9281:4867..8706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9281.17066.1mRNA_H-paniculata_contig9281.17066.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9281 4867..8706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9281.17066.1 ID=prot_H-paniculata_contig9281.17066.1|Name=mRNA_H-paniculata_contig9281.17066.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp
MPLQKITAASTGHGNAAAVTQGSMPQGKRKVKGPALLIKRYVDPNSKHVY
YGQVTVGGETYSCGECVAMETAEGTFVAEVLYIFKDQHGQAWVENRWLFN
KQEVQEALPKRIWPEMEDAELLETNEVTSNPASAIVHKVAVLDETDFRDR
VRRGMLNENRDFFCTKYLDTNYHRFMPAGAQGPDQRLRRGRRFSDRYDGP
DDGNASSSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001025BAH_dom