prot_H-paniculata_contig9244.17037.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9244.17037.1
Unique Nameprot_H-paniculata_contig9244.17037.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
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BLAST of mRNA_H-paniculata_contig9244.17037.1 vs. uniprot
Match: A0A6H5LQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ53_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.070e-13
Identity = 65/134 (48.51%), Postives = 80/134 (59.70%), Query Frame = 0 
Query:    1 MNWMTSGRKRVRRSQKSREQRAKHFAKVAADQRVLPQLVSR----SDTTLAHRQSADVTRLRSRWSLPDRSAQSTGLSLTNIHNNATASPATTSTPSALLRPGPLSNATP----TSLDPTVGVLNLDITPPFSS 126
            MNWMTSGRKRV+RSQK +E RAKHFAKVAAD+   P  VSR    S +TL   QSADV+RL+SRW  P  S          +  +A A   TT+  SA     P SN T     T+ D   G L+L++TPPF++
Sbjct:    1 MNWMTSGRKRVQRSQKVKELRAKHFAKVAADRARAP--VSRPARASSSTL--NQSADVSRLKSRWIQPLPSTHKVPALQRTVAGSAAAEH-TTAEDSA----SPPSNVTTLGSGTTPDFQPGTLDLEVTPPFNA 125
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9244.17037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LQ53_9PHAE3.070e-1348.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9244contigH-paniculata_contig9244:645..1716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9244.17037.1mRNA_H-paniculata_contig9244.17037.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9244 645..1716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9244.17037.1 ID=prot_H-paniculata_contig9244.17037.1|Name=mRNA_H-paniculata_contig9244.17037.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MNWMTSGRKRVRRSQKSREQRAKHFAKVAADQRVLPQLVSRSDTTLAHRQ
SADVTRLRSRWSLPDRSAQSTGLSLTNIHNNATASPATTSTPSALLRPGP
LSNATPTSLDPTVGVLNLDITPPFSS
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