prot_H-paniculata_contig9238.17030.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9238.17030.1
Unique Nameprot_H-paniculata_contig9238.17030.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length491
Homology
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BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A6H5L2V4_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2V4_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.950e-21
Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = 0 
Query:  240 GEYPIAIPGTSVRRYMHIQLLLALMSVPGLKVAAPAKVSWKRLGYYPVDTIFGPLPPGARPVPP 303
            G++PIAIPGTSVRRYMH+QLLLALMS PGL+V  PA+VSW RLGYYPVD +FGP  PGARP  P
Sbjct:  478 GDHPIAIPGTSVRRYMHVQLLLALMSAPGLRVVTPARVSWDRLGYYPVDAVFGPPKPGARPPGP 541
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2V4_9PHAE1.950e-2176.56MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9238contigH-paniculata_contig9238:4033..5505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9238.17030.1mRNA_H-paniculata_contig9238.17030.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9238 1410..5505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9238.17030.1 ID=prot_H-paniculata_contig9238.17030.1|Name=mRNA_H-paniculata_contig9238.17030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=491bp
MLQAYDALDKKLEGKHRLEHIGNDNDENTSTFKNMGSIFDRGIDGRGPCH
GVVEPGPRGRTKGKGKSKSSFVEGASGVGIVSGGEAPPMFQAPASSENSD
LSRRLSTSNNQPRPRLFVHTNVNAETYTAQGPQNPPGSECMGSDAATVRS
ATGASSGAAHASSSCPNYGSGPKIGSAAAAAEAAAEAAARYSSHSMGSAV
GVGPPPMPPPPPHIHHQHGYPESHGHGNGVGVVGGVCESGEYPIAIPGTS
VRRYMHIQLLLALMSVPGLKVAAPAKVSWKRLGYYPVDTIFGPLPPGARP
VPPGTSAKAAAAAAAAAAASEATAAAAAAAAAAAAASASATAAAAAVAAR
SCPGFAQALNTAAAPSPPRKRRRVSSKKPRPLTSAAAHDSTSTTHQHPPG
MSNTGAMAMMPPSQNSPRTSAMLSGLPLPFVGSAENSLMLGDSWDLNNSA
TSPSAYMGFGGPASTAPSAAPPVGSKGGAGGGGGGPDGNGS
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