mRNA_H-paniculata_contig9238.17030.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A835YS16_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS16_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.920e-33 Identity = 58/107 (54.21%), Postives = 77/107 (71.96%), Query Frame = 1
Query: 31 ELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCK 351
E R W+R ED IVRLV E G WSL+A L EIVG +R+GK+CR RW ++LDP++++ PWT EEE + +A R+G++WA+IA L GRTD+AI+ HWYS M K
Sbjct: 1 ERRSWTRCEDEAIVRLVAEHGVKRWSLVAQHLNMEIVGVVRSGKQCRTRWLNHLDPSLRKEPWTSEEEQVIYDAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRK 107
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: F0Y4P7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4P7_AURAN) HSP 1 Score: 130 bits (328), Expect = 6.410e-32 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 13 PGSQKRELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNM 345
P + + R WSR ED+ IVRLV+ GT W++I+ L E+ G R+GK+CR RW ++LDP IKR PW+ EE + EA R+G++WA+IA LPGRTD+AI+ HWYS M
Sbjct: 19 PSGEASQRRAWSRKEDDAIVRLVMTHGTKRWAVISQELNKELAG-FRSGKQCRTRWLNHLDPAIKREPWSEGEESVIYEAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTM 128
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A835ZPI2_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPI2_9STRA) HSP 1 Score: 127 bits (319), Expect = 6.110e-31 Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 31 ELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCR 363
E R WS+ ED+ I LV G WSLIA L E+ G +R+GK+CR RW ++LDP+++R PWT EEE + A R+G++WA+IA L GRTD+AI+ HWYS M K R
Sbjct: 1 ERRAWSKREDDAISGLVTHYGVKRWSLIAQNLSKEVEGAVRSGKQCRTRWLNHLDPSLRRDPWTDEEEQVIYNAQRRLGNKWAEIAKLLTGRTDNAIKNHWYSTMRKNMRR 111
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A6G0WVT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVT3_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.330e-30 Identity = 65/150 (43.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 31 ELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNM---CKKTCRDSSKNTGGLNFGGCRDRVSLSQHADGVACGNDVDGN 471
E R W+R ED+ I+RLV E GT WS+I+ L E G R GK+CR RW ++LDP+IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M ++ + +K+T GG R + Q D + + +GN
Sbjct: 23 ERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNNENYGNERTGKQCRTRWLNHLDPSIKKDPWTTEEESIIEDAQNRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTMRRIAKQVNKSTPPPMQGGLSTRPASRQSMDEMMSSLNSEGN 172
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A485KGS6_9STRA (Aste57867_5629 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGS6_9STRA) HSP 1 Score: 135 bits (340), Expect = 7.570e-30 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 16 GSQKRELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCRDSSK 375
G E R W+R ED+ I+RLV E GT WS+I+ L E G R GK+CR RW ++LDP+IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M ++T R +K
Sbjct: 20 GGTAYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNNENYGNERTGKQCRTRWLNHLDPSIKKDPWTTEEESIIEDAQNRLGNKWAEISKLLPGRTDNAIKNHWYSSM-RRTMRRIAK 138
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A024TC07_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TC07_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.470e-30 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 16 GSQKRELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCRDSSK 375
G E R W+R ED+ I+RLV E GT WS+I+ L E G R GK+CR RW ++LDP+IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M ++T R +K
Sbjct: 21 GGTAYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNNENFGNERTGKQCRTRWLNHLDPSIKKDPWTTEEESIIEDAQNRLGNKWAEISKLLPGRTDNAIKNHWYSSM-RRTMRRIAK 139
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: W4GN76_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GN76_9STRA) HSP 1 Score: 135 bits (340), Expect = 9.470e-30 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 16 GSQKRELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCRDSSK 375
G E R W+R ED+ I+RLV E GT WS+I+ L E G R GK+CR RW ++LDP+IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M ++T R +K
Sbjct: 20 GGTAYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNNENYGNERTGKQCRTRWLNHLDPSIKKDPWTTEEESIIEDAQNRLGNKWAEISKLLPGRTDNAIKNHWYSSM-RRTMRRIAK 138
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A1V9ZB05_9STRA (Myb-like DNA-binding protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZB05_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.040e-29 Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 1
Query: 31 ELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCRDSSK 375
E R W+R ED I+RLV E GT WS+I+ L +E G R GK+CR RW ++LDP+IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M ++T R +K
Sbjct: 20 ERRAWTRKEDESIIRLVEEYGTKRWSVISDHLNSENFGNERTGKQCRTRWLNHLDPSIKKDPWTTEEESIIEDAQNRLGNKWAEISKLLPGRTDNAIKNHWYSSM-RRTMRRIAK 133
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A3F2RS30_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RS30_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.150e-29 Identity = 62/135 (45.93%), Postives = 84/135 (62.22%), Query Frame = 1
Query: 16 GSQKRELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCRDSSKNTGGLNFGGCRDRVS 420
G E R W+R ED+ I+RLV E GT WS+I+ L E G R GK+CR RW ++LDP IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M + R + + L G R S
Sbjct: 22 GGSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNGENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSMRRTMRRMAKQQNKSLGQGAARGNSS 156
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Match: A0A484E484_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E484_BRELC) HSP 1 Score: 132 bits (333), Expect = 2.800e-29 Identity = 60/123 (48.78%), Postives = 84/123 (68.29%), Query Frame = 1
Query: 7 MHPGSQKRELRPWSRTEDNVIVRLVLELGTNCWSLIAARLGTEIVGGLRNGKECRNRWTDYLDPNIKRHPWTREEEDAVREAHGRIGDRWADIANFLPGRTDDAIEEHWYSNMCKKTCRDSSK 375
M+ E R W+R ED+ I+RLV E GT WS+I+ L +E G R GK+CR RW ++LDP IK+ PWT EEE + +A R+G++WA+I+ LPGRTD+AI+ HWYS+M ++T R +K
Sbjct: 11 MNVRGSTYERRAWTRKEDDAIIRLVEEYGTKRWSVISDHLNSENHGTERTGKQCRTRWLNHLDPTIKKDPWTTEEEQIIEDAQTRLGNKWAEISKLLPGRTDNAIKNHWYSSM-RRTMRRMAK 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9238.17030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9238.17030.1 >prot_H-paniculata_contig9238.17030.1 ID=prot_H-paniculata_contig9238.17030.1|Name=mRNA_H-paniculata_contig9238.17030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=491bp MLQAYDALDKKLEGKHRLEHIGNDNDENTSTFKNMGSIFDRGIDGRGPCHback to top mRNA from alignment at H-paniculata_contig9238:1410..5505+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9238.17030.1 ID=mRNA_H-paniculata_contig9238.17030.1|Name=mRNA_H-paniculata_contig9238.17030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4096bp|location=Sequence derived from alignment at H-paniculata_contig9238:1410..5505+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9238:1410..5505+ >mRNA_H-paniculata_contig9238.17030.1 ID=mRNA_H-paniculata_contig9238.17030.1|Name=mRNA_H-paniculata_contig9238.17030.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2946bp|location=Sequence derived from alignment at H-paniculata_contig9238:1410..5505+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |