mRNA_H-paniculata_contig9203.17010.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig9203.17010.1
Unique NamemRNA_H-paniculata_contig9203.17010.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 424 bits (1089), Expect = 4.750e-136
Identity = 221/362 (61.05%), Postives = 260/362 (71.82%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQLVQ 2033
            VHQAHGS YSYFP+DENGVV+D +G TT +GLRMIMVHAITKWGPL      + FPIEEG FK  E GSG++      M DE+TAEFLWQAKLAKG+YHAAMTD+MFMEWLEHR +PA+NA PEF GKKMILVLDNASYHHGFD+EVKVPETN K +NV LLRK+GA +I VKR       VEH FEVP+EPGSSFP   R GGVSR EVA ATRE  RL+YPE L         ++G +         + S + +   W   ++   L    + KM EVW QIR+GWYGD  W GQ+GGW AA+CSKLV HAIGEMNKW++DRD  L G IGN + P  YD+DDVS V + ++G+GEQ+ Q
Sbjct:  310 VHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--FCDGFPIEEGWFK--ETGSGKK-----KMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIW--TPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKPDGYDKDDVSPVGDVEEGVGEQIQQ 660          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 5.900e-136
Identity = 217/362 (59.94%), Postives = 258/362 (71.27%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQLVQ 2033
            VHQAHGS YSYFP+DE+GVV+D +G TT +GLRMIMVHAITKWGPL      +  PIEEG FK  E GSG++      M DE+TAEFLWQAKLAKG+YHAAMTD+MFMEWLEHR  PA+NA PEF+GK+MILVLDNASYHHGFD++VK+PE+N K +NV LLR +GA +I VKR    G    + FEVPTEPGSSFP   R GGVSR EVA ATRE   L++PE L         ++G +         + S + +   W   ++   L    + KM EVW QIRKGWYGD  WPGQ+GGW AADCSKLV HAIGEMNKW+KDRDG L GTIG+ E P  YD DDVS V + ++G+GEQ+ Q
Sbjct:    6 VHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVKRK--EGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIW--TPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQ 354          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 421 bits (1083), Expect = 1.370e-135
Identity = 220/362 (60.77%), Postives = 260/362 (71.82%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQLVQ 2033
            VHQAHGS YSYFP+DE+GVV+D +G TT +GLRMIMVHAITKWGPL      +  PIEEG FK  E GSG++      M DE+TAEFLWQAKLAKG+YHAAMTD+MFMEWLEHR +PA+NA PEF+GK+MILVLDNASYHHGFD+EVKVPETN K +NV LLR +GA +I V+R      VVE+ FEVPTEPGSSFP   R GGVSR EVA ATRE   L++PE L         ++G +         + S + +   W   ++   L    + KM EVW QIRKGWYGD  WPGQ+GGW AADCSKLV HAIGEMNKW+KDRDG L GTIG+ E P  YD DDV  V + ++G+GEQ+ Q
Sbjct:  276 VHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIW--TPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVPPVGDVEEGVGEQIQQ 626          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 2.590e-135
Identity = 221/362 (61.05%), Postives = 260/362 (71.82%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQLVQ 2033
            VHQAHGS YSYFP+DE+GVV+D +G TT +GLRMIMVHAITKWGPL      +  PIEEG FK  E GSG++      M DE+TAEFLWQAKLAKG+YHAAMTD+MFMEWLEHR +PA+NA PEF+GK+MILVLDNASYHHGF SEVKVPETN K +NV LLR +GA +I V+R      VVE+ FEVPTEPGSSFP   R GGVSR EVA ATRE   L++PE L         ++G +         + S + +   W   ++   L    + KM EVW QIRKGWYGD  WPGQ+GGW AADCSKLV HAIGEMNKW+KDRDG L GTIG+ E P  YD DDVS V + ++G+GEQ+ Q
Sbjct:  286 VHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIW--TPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQ 636          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 4.950e-122
Identity = 198/325 (60.92%), Postives = 235/325 (72.31%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRD 1922
            VHQAHGS YSYFP+DE+GVV+D +G TT +GLRMIMVHAITKWGPL      +  PIEEG FK  E GSG++      M DE+TAEFLWQAKLAKG+YHAAMTD+MFMEWLEHR +PA+NA PEF+GK+MILVLDNASYHHGFD+EVKVPE+N K +NV LLR +GA +I V+R      VVE+  EVPTEPGSSFP   R GGVSR EVA ATRE   L++PE L         ++G +         + S + +   W   ++   L+   + KM EVW QIRKGWYGD  WPGQ+GGW AA+CSKLV HAIGEMNKW+KDRD
Sbjct:  159 VHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIW--TPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKDRD 472          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5KF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF49_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 7.130e-110
Identity = 202/382 (52.88%), Postives = 240/382 (62.83%), Query Frame = 3
Query:  513 GEHLQDRPFESQRRQQALVGQQHPVGNHRRRKRQGHQERRRPTVSHPRSGGPALHAYQRRAQSRAPSLSPYGGGVDDGALQPRQGGVEPRGWRVAAEARL*--------APQGQDQNTPVGCQEARAYSSVSR*NGHCEKGRGYGAGSSCVHG*EVVHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESL 1634
            GEH+QDRP E Q RQQ LVG    V +H R +RQ H+E           G PA   ++       PS    GG +     + R+G ++      A  AR+         A + +D    V       Y   S                        VHQAHGS YSYFP+DE+GVV+D +G TT +GLRMIMVHAITKWGPL      + FPIEEG FK K  G G++G K FN+ DE+TAEFLWQAKLAKG+YHAAMTD+MFMEWLE R +PA+NA P+F+GKKMILV DNASYH GFD+EVKVPETN K YNV LLR+YG  +I VKRAA NG VV+ RFEVPT+ GS+ PDARR GGVSREEVA ATRE FRL++PE L
Sbjct:  164 GEHIQDRPREGQTRQQPLVGTPRVVRDHLRGERQDHEE-----------GRPAALCHRTCGFEEQPSNRSVGGLLSRLGYKRRRGRIKTPRLDAARLARIRRFLVEMDIAKRAEDAGLAV-----IVYMDES-----------------------FVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGFPIEEGWFKSKGGGKGKRGGKDFNLEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLERRLSPAYNAVPDFKGKKMILVRDNASYHQGFDAEVKVPETNTKKYNVELLRRYGVRSIKVKRAAANGRVVQQRFEVPTDEGSTLPDARREGGVSREEVATATREYFRLNHPEKL 504          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5LE74_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE74_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 5.290e-104
Identity = 192/404 (47.52%), Postives = 241/404 (59.65%), Query Frame = 3
Query:  828 QDQNTPVGCQEARAYSSVSR*NGHCEKGRGYGAGSSCVHG*EVVHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGR--QGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQ 2024
            QDQN PV   E + +  +       ++    G           VHQAHGSAYSYFP+D+ GVV+D +G  T +GLRMIMVHAITK GPL         PI EG FK KEN + +   G   F M+DE+TAEFLWQAKLA G+YH AMTD MFM+WL+HR TPAF+A  +F+ KKM LVLDNASYHH FD EVKVPETN+K YNV LLRKYG  +  V R +  G   E+ FEVP +   S P+A R  GVS+EE+A  TR  F+ ++P+ L          +G            F  + +   W   +    +       M +VW+QIR GWYGDP W GQ+GGW AADC KLV H IG+M++WI    G L GTIG+ E P    Q+  +  +E +DG+ EQ
Sbjct:   73 QDQNIPVERGEEKPHPPLPVKMDLAKRAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRITGKGLRMIMVHAITKHGPLAE--LQEGLPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQ--GSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTF--QPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAADCGKLVQHTIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQE-ATAEDEIEDGVEEQ 466          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 1.060e-103
Identity = 178/308 (57.79%), Postives = 213/308 (69.16%), Query Frame = 3
Query: 1119 FPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQLVQ 2033
             PIEEG FK  E GSG++      M DE+TAEFL   K AKG++HAAMTD+MFMEWLEHR +PA+NA PEF+GK+MILVLDNASYHHGFD+EVKVPETN K +NV LLR +GA +I V+R      VVE+  EVPTEPGSSFP   R GGVSR EVA ATRE   L++PE L         ++G +         + S + +   W   ++   L    + KM EVW QIRKGWYGD  WPGQ+GGW AADCSKLV HAIGEMNKW+KDRDG L GTIG+ E P  YD DDVS V + ++G+GEQ+ Q
Sbjct:  227 LPIEEGWFK--ETGSGKK-----EMEDEETAEFLCHFKFAKGDHHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIW--TPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQ 525          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 334 bits (857), Expect = 1.640e-103
Identity = 185/361 (51.25%), Postives = 231/361 (63.99%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGR--QGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRE---LQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQ 2024
            VHQAHGSAYSYFP+D+ GVV+D +G TT +GLRMIMVHAITK GPL        FPI EG FK KEN + +   G   F M+DE+TAEFLWQAKLA G+YH AMTD MFM+WL+HR TPAF+A  +F+ KKM LVLDNASYHH FD EVKVPETN+K YNV LLRKYG  +  V R +  G   E+ FEVP +   S P+A R  GVS+EE+A  TR  F+ ++P+ L          +G            F  + +   W   +    +       + +VW+QIR GWYGDP W GQ+GGW AA+C KLV HAIG+M++WI    G L GTIG+ E P    Q+  +  +E +DG+ EQ
Sbjct:  154 VHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAE--LQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQ--GSLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTF--QPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYPVAEYQE-ATAEDEIEDGVEEQ 504          
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Match: A0A6H5KQG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQG8_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 1.130e-101
Identity = 186/359 (51.81%), Postives = 215/359 (59.89%), Query Frame = 3
Query:  957 VHQAHGSAYSYFPTDENGVVEDRMGHTTREGLRMIMVHAITKWGPLVARGTNNDFPIEEG*FKRKENGSGRQGVKGFNMTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGKKMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVNGTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRSGWRRSCSRRGGS*FGHRLRYRLFSHRVVVAAW*AVRELQLSAEAKMHEVWEQIRKGWYGDPTWPGQDGGWNAADCSKLVAHAIGEMNKWIKDRDGQLGGTIGNREVPQRYDQDDVSRVNEADDGLGEQLVQ 2033
            VHQAHGS YSYFP+DENGVV+D +G  TR+GLRM MVHAITKWG L      + FPIEEG FK  E GSG+       M DE+TAEFLWQAKLAKG++HAAMTD+MFME LEHR +PA NA P+                       +   TN K +NV LLR +GA +I VKR  V   VVEH FEVPTEPG SFP   R GGVSR EVA   RE  RL++PE L          + G  +                       L    + K  EVW QIRKGW+GD  WPGQ+GGW A +CSKL+ HAIGE NKW+KDRDG L GTIGN   P  YD DDVS V   +  +GEQ+ Q
Sbjct:  170 VHQAHGSPYSYFPSDENGVVQDGIGRKTRKGLRMSMVHAITKWGALAK--FCDGFPIEEGWFK--ETGSGKN-----TMGDEETAEFLWQAKLAKGDFHAAMTDSMFMERLEHRLSPACNAIPD-----------------------QSAGTNTKEHNVHLLRMFGAKSIRVKRKEVEQGVVEHNFEVPTEPGPSFPAGNREGGVSRAEVATVPREYIRLNHPERLVVRVVTFMKNKHGKQYV---------------------SLNFELKRKRREVWVQIRKGWHGDKEWPGQEGGWKAVNCSKLIDHAIGETNKWVKDRDGLLSGTIGNLNKPDGYDTDDVSPVGHVEKRVGEQIKQ 475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9203.17010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM6_ECTSI4.750e-13661.05DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KHE7_9PHAE5.900e-13659.94DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE1.370e-13560.77DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE2.590e-13561.05DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE4.950e-12260.92DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KF49_9PHAE7.130e-11052.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LE74_9PHAE5.290e-10447.52Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K024_9PHAE1.060e-10357.79DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KCN2_9PHAE1.640e-10351.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQG8_9PHAE1.130e-10151.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9203contigH-paniculata_contig9203:4531..7178 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2045
Cds size489
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9203.17010.1prot_H-paniculata_contig9203.17010.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig9203 6324..6812 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931146.4307358-UTR-H-paniculata_contig9203:4530..50401622931146.4307358-UTR-H-paniculata_contig9203:4530..5040Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9203 4531..5040 +
1691481611.6717727-UTR-H-paniculata_contig9203:4530..50401691481611.6717727-UTR-H-paniculata_contig9203:4530..5040Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9203 4531..5040 +
1622931146.4465423-UTR-H-paniculata_contig9203:5643..63231622931146.4465423-UTR-H-paniculata_contig9203:5643..6323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9203 5644..6323 +
1691481611.686993-UTR-H-paniculata_contig9203:5643..63231691481611.686993-UTR-H-paniculata_contig9203:5643..6323Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9203 5644..6323 +
1622931146.4806013-UTR-H-paniculata_contig9203:6812..71781622931146.4806013-UTR-H-paniculata_contig9203:6812..7178Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9203 6813..7178 +
1691481611.714828-UTR-H-paniculata_contig9203:6812..71781691481611.714828-UTR-H-paniculata_contig9203:6812..7178Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig9203 6813..7178 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931146.4665072-CDS-H-paniculata_contig9203:6323..68121622931146.4665072-CDS-H-paniculata_contig9203:6323..6812Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9203 6324..6812 +
1691481611.7044296-CDS-H-paniculata_contig9203:6323..68121691481611.7044296-CDS-H-paniculata_contig9203:6323..6812Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig9203 6324..6812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig9203.17010.1

>prot_H-paniculata_contig9203.17010.1 ID=prot_H-paniculata_contig9203.17010.1|Name=mRNA_H-paniculata_contig9203.17010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp
MTDEKTAEFLWQAKLAKGNYHAAMTDTMFMEWLEHRRTPAFNANPEFRGK
KMILVLDNASYHHGFDSEVKVPETNNKVYNVGLLRKYGAGAITVKRAAVN
GTVVEHRFEVPTEPGSSFPDARRAGGVSREEVALATRELFRLHYPESLRS
GWRRSCSRRGGS*
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mRNA from alignment at H-paniculata_contig9203:4531..7178+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig9203.17010.1 ID=mRNA_H-paniculata_contig9203.17010.1|Name=mRNA_H-paniculata_contig9203.17010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2648bp|location=Sequence derived from alignment at H-paniculata_contig9203:4531..7178+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAGACGAAGGGCAGGCACCAACCCACTGGTGGCACCACTGGCCG CTCGAGCAACGTGGCGAAAAGGGCCAAAACTGGTGCGGCGAGAAATGCTC AGGCTCTCGACAGACTCAGCGTTCAGCTTGAGGAGCAGCAGGTAGCGCTA GCGGCGCTCAAGGCGGAGGTCGAGTCGAGGGAGAAAGCTGTCAAGGCGAA AGAGGCAGCGATTGCCAAGAAAGAGGCAGCGATTGCCAAGAAAGAGGCAA ACAAAGAGCGCGTCGCTGCGAAGCAGCAAGCGAAACAGCAAGTGCACGAA CAGCGAGGGCAGAAGCTAGTCGAAGCGGCTCCTCACACCGCACAGCAGCC GAAGCTTTCACAGGCAGCCCGCACCTTCATCGACGACTCTGTGGACAAGC TGAAGCCTTGAACTGGCGAGGTCTTGTGCAATCTCCAGTCGAAGCTGATT CTCATGCTGCTGTTTGCTCTTCGCAAGGATGGCGTCTCTGAGAATCAACC AGTGCTTCAGGTCAGTACGAGTACAGTCAGCAAGTTTATTAAACATTGAT ATTTCTACACCTGAGTCACCCTATGATCCACTGCAACCAAACATGCCGAC CATATATAAACTCCATGTAACCGGAAAATCACGTAACCGTCGCTTTATCG ATCATACCCAAGACGCACAATGCACATAGCTGCCTGTAACAGCACATTGG TGAAATGGGGACCCAACTTTGAGATGGGGACCCTGGGTTATATTAGAAAT AGGCTGTATCCTGAAGACCCGAAGTTGATTTTCAGGAAAAGGCCTATTTC CAATATAACCCAGGGTCCCCATCTCAAAGTTGGGTCCCCATTTCACCAAT ATGCTGTTCTGTACGGTTGTGCACTGCTGTGTGTACCGTACAACAGTAAG TTTGCTGTCTCCCAAATCCTCACCAATGTACCTACGGCGATAACGCTGTT ACGAATGGCGCCGTATGCGCATTTTCTTCCAAGGCTGTACGTTGTTAAAC TTCTGCTCTCTGTTTGCACGGCTTGAGGTGTGCTGTCTGAGCAATTGCAC TTACTCGACTCCCGTATGCCGATGCAATATGCGCTGCGTTCTGGACAACT GAACGTCTGCCAGGTGGTGAGCACCTTCAAGATCGGCCATTCGAAAGTCA GAGACGTCAACAAGCACTGGTAGGACAACAGCACCCTGTTGGAAACCACC GGCGAAGGAAGAGGCAAGGTCACCAAGAACGACGACGGCCGACGGTGTCT CACCCAAGATCAGGAGGACCAGCTTTACACGCTTATCAACGACGAGCACA AAGCCGGGCGCCAAGTCTTTCGCCGTACGGTGGCGGAGTGGATGATGGAG CACTGCAACCCAGACAAGGAGGTGTCGAACCGCGCGGTTGGAGGGTTGCT GCAGAAGCTCGGTTATAGGCGCCGCAGGGGCAGGATCAAAACACCCCCGT TGGATGCCAAGAGGCTCGCGCGTATTCGTCTGTTTCTCGTTAAAATGGAC ATTGCGAAAAGGGCAGAGGATACGGGGCTGGCAGTTCTTGTGTACATGGA TGAGAGGTTGTCCACCAGGCGCACGGTTCCGCGTATTCATACTTTCCTAC TGACGAGAATGGAGTTGTAGAAGATAGGATGGGTCACACGACGAGGGAGG GCTTACGCATGATTATGGTGCATGCAATCACGAAGTGGGGCCCATTGGTT GCGCGTGGTACCAATAATGACTTTCCAATCGAAGAGGGTTGATTTAAGCG TAAGGAAAACGGTAGCGGAAGGCAAGGAGTTAAGGGCTTTAACATGACAG ATGAGAAAACAGCCGAGTTTCTGTGGCAGGCCAAGTTGGCTAAGGGCAAT TATCACGCGGCTATGACCGATACGATGTTCATGGAGTGGCTTGAACACCG CCGTACCCCAGCTTTCAACGCTAACCCTGAGTTCAGGGGCAAGAAGATGA TCCTTGTTCTTGACAACGCCTCGTACCATCATGGTTTCGACTCGGAAGTC AAGGTACCGGAAACCAATAACAAGGTGTACAATGTCGGACTGCTGCGTAA GTATGGAGCCGGGGCAATCACGGTGAAGCGTGCCGCTGTCAACGGCACAG TTGTGGAGCACCGCTTCGAGGTACCAACAGAACCTGGCTCTTCGTTCCCC GATGCGAGGCGGGCGGGCGGTGTTAGTAGAGAGGAGGTAGCGTTGGCCAC TCGAGAGTTGTTCCGCCTTCACTACCCTGAAAGCTTGAGGAGCGGGTGGA GACGTTCATGCAGCAGAAGGGGTGGGAGTTGATTTGGACACCGCCTTAGA TACCGTCTTTTCAGCCATAGAGTCGTTGTGGCAGCATGGTAAGCAGTACG TGAGCTTCAACTTTCAGCTGAAGCGAAAATGCACGAGGTGTGGGAGCAGA TTCGCAAAGGTTGGTACGGGGACCCGACGTGGCCAGGGCAGGACGGGGGG TGGAACGCAGCCGATTGTTCCAAGTTGGTGGCGCACGCCATTGGCGAGAT GAACAAGTGGATCAAGGATCGTGATGGACAGCTGGGTGGTACGATAGGTA ACCGTGAAGTTCCACAAAGGTATGATCAGGACGATGTATCACGTGTGAAC GAGGCCGATGATGGGTTGGGGGAGCAGCTGGTACAGGATGACGATGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig9203:4531..7178+

>mRNA_H-paniculata_contig9203.17010.1 ID=mRNA_H-paniculata_contig9203.17010.1|Name=mRNA_H-paniculata_contig9203.17010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at H-paniculata_contig9203:4531..7178+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAGATGAGAAAACAGCCGAGTTTCTGTGGCAGGCCAAGTTGGCTAA
GGGCAATTATCACGCGGCTATGACCGATACGATGTTCATGGAGTGGCTTG
AACACCGCCGTACCCCAGCTTTCAACGCTAACCCTGAGTTCAGGGGCAAG
AAGATGATCCTTGTTCTTGACAACGCCTCGTACCATCATGGTTTCGACTC
GGAAGTCAAGGTACCGGAAACCAATAACAAGGTGTACAATGTCGGACTGC
TGCGTAAGTATGGAGCCGGGGCAATCACGGTGAAGCGTGCCGCTGTCAAC
GGCACAGTTGTGGAGCACCGCTTCGAGGTACCAACAGAACCTGGCTCTTC
GTTCCCCGATGCGAGGCGGGCGGGCGGTGTTAGTAGAGAGGAGGTAGCGT
TGGCCACTCGAGAGTTGTTCCGCCTTCACTACCCTGAAAGCTTGAGGAGC
GGGTGGAGACGTTCATGCAGCAGAAGGGGTGGGAGTTGAATGACAGATGA
GAAAACAGCCGAGTTTCTGTGGCAGGCCAAGTTGGCTAAGGGCAATTATC
ACGCGGCTATGACCGATACGATGTTCATGGAGTGGCTTGAACACCGCCGT
ACCCCAGCTTTCAACGCTAACCCTGAGTTCAGGGGCAAGAAGATGATCCT
TGTTCTTGACAACGCCTCGTACCATCATGGTTTCGACTCGGAAGTCAAGG
TACCGGAAACCAATAACAAGGTGTACAATGTCGGACTGCTGCGTAAGTAT
GGAGCCGGGGCAATCACGGTGAAGCGTGCCGCTGTCAACGGCACAGTTGT
GGAGCACCGCTTCGAGGTACCAACAGAACCTGGCTCTTCGTTCCCCGATG
CGAGGCGGGCGGGCGGTGTTAGTAGAGAGGAGGTAGCGTTGGCCACTCGA
GAGTTGTTCCGCCTTCACTACCCTGAAAGCTTGAGGAGCGGGTGGAGACG
TTCATGCAGCAGAAGGGGTGGGAGTTGA
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