prot_H-paniculata_contig9200.17009.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9200.17009.1
Unique Nameprot_H-paniculata_contig9200.17009.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
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BLAST of mRNA_H-paniculata_contig9200.17009.1 vs. uniprot
Match: A0A6H5KFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP0_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 2.190e-39
Identity = 111/270 (41.11%), Postives = 132/270 (48.89%), Query Frame = 0 
Query:    3 LEVIEQVAGMVGGILEFPLTGMFGRLLPAGGSKAGQQVATAVGTGLDNLGSLCSQTGLDRWELLGLAVLSAITVYRKELSSNSVHRTGAKQQQGAGAASLRIEGEETGVTNDLDINGEHDERFSNSSVSRAAFTIPPGFQHKDGCFITLRNKRKSDPDIDNGTVSGQQPPCSQQEP--TPCECLLAXXXXXXXXXXSPNSLPPSAVEQRKLRRLVEGRMRSLGLPV-----HHLQQLRASVDKSWLLFAAAWGETLRSRHGSGAPAANKG 265
            +E IE + GMV  +LEFPL G  GRL+P GGS+AGQQVATAVG GLDNLGSLCSQ GLDRWELLGLAVLSAITVYRKELSSNSV+  G     GAGA   R                             +A  +     H DGC + +                             T   C+ A          S       A ++R+L  LV GR   +  P+     +HLQQLRASVD SW  F+ AW    R   GSG+ + + G
Sbjct:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVGVGLDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKG-----GAGAGGRRY--------------------HRTGGDGGSAVVV-----HVDGCHVAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGKPCMCARIAAQQRQRASAARRLRQAEDERRLESLVAGRTAMMIRPLDLSANNHLQQLRASVDASWSSFSTAWD--ARRARGSGSGSTDGG 238
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BLAST of mRNA_H-paniculata_contig9200.17009.1 vs. uniprot
Match: D7FI18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI18_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 2.120e-35
Identity = 68/88 (77.27%), Postives = 74/88 (84.09%), Query Frame = 0 
Query:    3 LEVIEQVAGMVGGILEFPLTGMFGRLLPAGGSKAGQQVATAVGTGLDNLGSLCSQTGLDRWELLGLAVLSAITVYRKELSSNSVHRTG 90
            +E IE + GMV  +LEFPL G  GRL+P GGS+AGQQVATAV  GLDNLGSLCSQ GLDRWELLGLAVLSAITVYRKELSSNSV+  G
Sbjct:    1 MEAIELLGGMVNSVLEFPLVGFLGRLVPVGGSEAGQQVATAVAVGLDNLGSLCSQAGLDRWELLGLAVLSAITVYRKELSSNSVYGKG 88
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9200.17009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFP0_9PHAE2.190e-3941.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI18_ECTSI2.120e-3577.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9200contigH-paniculata_contig9200:3359..6725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9200.17009.1mRNA_H-paniculata_contig9200.17009.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9200 3359..7242 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9200.17009.1 ID=prot_H-paniculata_contig9200.17009.1|Name=mRNA_H-paniculata_contig9200.17009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
MVLEVIEQVAGMVGGILEFPLTGMFGRLLPAGGSKAGQQVATAVGTGLDN
LGSLCSQTGLDRWELLGLAVLSAITVYRKELSSNSVHRTGAKQQQGAGAA
SLRIEGEETGVTNDLDINGEHDERFSNSSVSRAAFTIPPGFQHKDGCFIT
LRNKRKSDPDIDNGTVSGQQPPCSQQEPTPCECLLAVAAAAAAAAASPNS
LPPSAVEQRKLRRLVEGRMRSLGLPVHHLQQLRASVDKSWLLFAAAWGET
LRSRHGSGAPAANKGMKEGDRDDFLTSSSVSGVGSPSPASGAFVLPPCSH
RFHRTKSRTGRSAKKGTVNNSDEQGHRGAWSGDG
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