mRNA_H-paniculata_contig12710.1700.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI) HSP 1 Score: 424 bits (1090), Expect = 8.390e-144 Identity = 216/330 (65.45%), Postives = 257/330 (77.88%), Query Frame = 3 Query: 165 PLTIFLL----AQEGLGFVLRSDTTIVRLR--GGAESDPSA--------------RQQQELIGRGPLDPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYTCM 1094 PL + LL AQ +G + + T+ LR GG+ D +A + +IGRGP +PVRPFVPDLL GK ALVTGGNRGIGEAITVALVKAGA VC+MA +E A+R MV RH G D E GNV+W++A+LR+PSEA+ GA+KAV WAGG++DILVNNAGI +E+FM ISSD FDEVIA+NTRAPLLVSQVCL+GMIK + GKIVNI+S SAVI +AHASY ASK+A+DG+ GLV DL++HNIQVNN+APT+AWSDMGIKTW DP KS+P L+ TP+GRFVE WE+ANMVVFL SDACTMCLGQTICVDGGYTC+ Sbjct: 12 PLVVLLLPLQQAQSFVGGAVSTTTSSANLRWRGGSSVDAAASTGPGEXXXXXXGQEESDVMIGRGPQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMVERH-GFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMIKNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 340
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA) HSP 1 Score: 221 bits (564), Expect = 9.110e-66 Identity = 118/261 (45.21%), Postives = 164/261 (62.84%), Query Frame = 3 Query: 306 DPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 D PF P LL + A+VTGGN GIG AIT ALVKAGA ++A S+ F M+ H+ L +G+ +I+A+L + + AV WA G +DILVNNAG+ + +A+D+V+AVN RAP L++Q C GMI+Q GKI+NISS + I HA+Y ASK+A+D +TR + + +KHNIQ N++ PT+ ++MG + W +P TP+GRF E EVANMVV+LCSDA + GQT+ ++GG T Sbjct: 4 DDTFPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFL-----QGSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQRAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGGAA-GEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI) HSP 1 Score: 201 bits (510), Expect = 1.570e-57 Identity = 109/264 (41.29%), Postives = 162/264 (61.36%), Query Frame = 3 Query: 300 PLDPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQ-EYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 P +P P+ D+L GK A+VTGG+ GIG AIT+AL++AGA V ++A S + ++V + DK +I +L + A +A +WAGG DILVNNAG+ + + S + +D + VN RAP +++Q C K MI + + GKIV+ SS +++ HA+Y SK+A+ G+T+ + A+ SK++I N V PTI +DMG K W +P K P +D TPLGRF E WE+A+ VV+L S + + GQ + +DGG T Sbjct: 8 PAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDK--TTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGIT 269
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: UPI000402D86B (SDR family oxidoreductase n=1 Tax=Geminicoccus roseus TaxID=404900 RepID=UPI000402D86B) HSP 1 Score: 184 bits (466), Expect = 2.580e-51 Identity = 115/255 (45.10%), Postives = 150/255 (58.82%), Query Frame = 3 Query: 342 GKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGN-VFWIKANLRIPSEAVEGAEKAVQWA---GGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYTCM 1094 G+ ALVTG +RGIG L AGA + +A A + A A E KG I+A+L VEG +A Q A GTIDILVNNAG+ E + S + FDEVIA+N RAPLL++Q+ MI Q GKI+NISS + VI HA+Y+ASK L+ +T+ + A+LS HNIQVN V PT+ + MG K WSDP + P L PLGR + EVA++++FL S A + G I +DGGYT + Sbjct: 12 GRKALVTGASRGIGAEACRVLADAGADIVAVARDTAALAETKA------AVEAKGRRCLVIEADLAT----VEGGRRAAQQALEAWGTIDILVNNAGMGLAESVLDASMEHFDEVIAINLRAPLLMAQLLAPAMIAQRRGKIINISSQAGVIGLLEHATYAASKGGLNAMTKVMAAELSPHNIQVNTVCPTVIMTPMGEKHWSDPARLDPFLAKVPLGRVGQPIEVADLILFLASSASDLITGDDIMIDGGYTAL 256
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI) HSP 1 Score: 180 bits (456), Expect = 8.290e-50 Identity = 102/253 (40.32%), Postives = 149/253 (58.89%), Query Frame = 3 Query: 333 LLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQ-EYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 +L K A+VTGG+ GIG +IT AL++AGA V ++A S F ++ + DK +I +L + A +A WAGG DILVNNAG+ + + + + +D + VN RAP +++Q C K MI + + GKIVN SS ++ HA+Y SK+A++G+T+ + A+ SKH+I N + PTI +DM K W P K P +D TPLGRF E WE+A+ VV+L S + GQ + +DGG T Sbjct: 1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDK--THFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGIT 251
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: UPI0013579E7C (SDR family oxidoreductase n=2 Tax=unclassified Geminicoccus TaxID=2623055 RepID=UPI0013579E7C) HSP 1 Score: 179 bits (455), Expect = 1.060e-49 Identity = 104/249 (41.77%), Postives = 147/249 (59.04%), Query Frame = 3 Query: 342 GKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 G+ A VTG ++GIG L AGA + +A + ++ A D ++A+L E A++A+ A GT+DILVNNAGI E + S D+FD VIA+N RAPLL++Q+ GMI Q GKI+NISS +A+I HA+YSASK L+ +T+ +VA+LS HNIQVN + PT+ + +G W DP + P + PLGR + EVA++++FL S A + G I +DGGYT Sbjct: 12 GQKAFVTGASKGIGAEACRVLADAGADIVAVARDRDGLAEIKA-----DVEAKGRRCLVVQADLASVEEGRRAAKEALD-AWGTMDILVNNAGIGCGEPILEASMDSFDRVIAINLRAPLLLTQLLAPGMIAQRRGKIINISSQAAMIGLLGHATYSASKGGLNAMTKVMVAELSPHNIQVNTICPTVIMTPLGQAYWGDPARYDPFVAKVPLGRVGQPIEVADLILFLASPASDLITGDDIMIDGGYT 254
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A7C5IVK0_9HYPH (Glucose 1-dehydrogenase n=1 Tax=Devosia sp. TaxID=1871048 RepID=A0A7C5IVK0_9HYPH) HSP 1 Score: 176 bits (446), Expect = 2.220e-48 Identity = 101/251 (40.24%), Postives = 149/251 (59.36%), Query Frame = 3 Query: 336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 L G+ ALVTG +RGIG I AGA + +A EEA + + R N + A+L A+ A++ G TIDILVN+AGI ++ + ++ + +D +AVN RAP L+SQ MI Q +GKI+NISS + VI + HA+Y+ SK AL+ +T+ L+A+ ++HNIQVN + PT+ + MG + WS P KS P L TPLGRF E E+A++ ++L S A + G I ++GG++ Sbjct: 10 LAGRTALVTGASRGIGAEICRVYADAGADIVAVARDEEALEGVAG-----EVRAKGRNCLTLTADLASTDGPGHAAKAALEQVG-TIDILVNSAGIALVDAALDLTLEQWDRTMAVNLRAPFLLSQALAPKMIAQRWGKIINISSQTGVIALKDHAAYATSKGALNALTKSLMAEWAEHNIQVNAICPTVVLTPMGKELWSPPEKSGPFLSKTPLGRFGEPVEIADLALYLASPAAELVNGSVIMIEGGFS 254
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A517VZM1_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZM1_9PLAN) HSP 1 Score: 175 bits (444), Expect = 4.370e-48 Identity = 103/253 (40.71%), Postives = 155/253 (61.26%), Query Frame = 3 Query: 336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYTCM 1094 +KGK ALVTG +RGIG I + L +AGA+V I A + Q+ + + +R + I+A+L + E A+KA ++ TIDILVNNAG + + F + + +D++ AVN RAP ++S++ + M Q+ GKI+NISS++ + HA+YSASK L+ +T+ + A+L NIQ N VAPT+ +++G K W P K +P D PL RF + EVA++V++L S A M GQ I +DGGYT + Sbjct: 10 VKGKTALVTGASRGIGAEIAMNLAQAGAEVLITARHHDDLIQVCEKIRSIGSRCEA-----IEADLISINGVEEVAQKAFEFFS-TIDILVNNAGTIEVAPFWETTVEDWDQMQAVNLRAPFILSKILSEPMRAQKQGKIINISSVAGIAALAGHAAYSASKGGLNQLTKVMAAELGPFNIQCNAVAPTVILTELGQKVWGSPEKGEPMKDKIPLHRFGKPLEVADLVLYLASPASDMMTGQVIALDGGYTAL 256
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A832EU15_9RHOB (Glucose 1-dehydrogenase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A832EU15_9RHOB) HSP 1 Score: 173 bits (439), Expect = 2.360e-47 Identity = 103/251 (41.04%), Postives = 145/251 (57.77%), Query Frame = 3 Query: 336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 L G+ ALVTG ++GIG I AGA + A A ++AR + F + + AV A A G IDILVNNAGIV + + +S D +DE +AVN RAP ++SQV GMI++ GKI+NISS + VI HA+Y+ SK AL+ +T+ L+A+ + HNIQVN + PT+ + MG + WS P KS P + TPLGRF E E+A++ ++L S A + G I ++GGY+ Sbjct: 10 LAGRTALVTGASKGIGAEICEVFADAGADIIATARDRSGLAATAA---AVEARGRRCRCFTCDL---VDAGAVRQMGLAALEAAGHIDILVNNAGIVRVAPAVDLSVDDWDETMAVNVRAPFVLSQVLAPGMIERRQGKIINISSQTGVIALADHAAYATSKGALNALTKSLMAEWAPHNIQVNAICPTVVLTPMGREVWSAPEKSAPFIAGTPLGRFGEPVEIADLALYLASPAAELVNGAVIMIEGGYS 254
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: UPI001411D6C3 (glucose 1-dehydrogenase n=1 Tax=Rubellimicrobium sp. CFH 75288 TaxID=2697034 RepID=UPI001411D6C3) HSP 1 Score: 171 bits (432), Expect = 2.420e-46 Identity = 101/252 (40.08%), Postives = 143/252 (56.75%), Query Frame = 3 Query: 336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAV-QWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088 L G+ ALVTG +RG+G I +AGA + +A E + +G R I A+L P VE A +A+ +W G ID+LVNNAGI + +S++ +DEV+AVN RAP L+++ MI Q GKIV ISS + VI + HA+Y+ASK L+ +T+ L A+ ++HN+QVN + PT+ + MG W P K +P +TP RF E EVA +FL S A M G + V+GG+T Sbjct: 9 LAGRKALVTGASRGLGPGICDLFARAGADIVAVARDEGGLAETARLVEGHGRR-----CLAIPADLATPDGPVEAARRALAEW--GPIDVLVNNAGITRLAPATDLSTEQWDEVMAVNLRAPFLLARELAPAMIAQRRGKIVMISSQTGVIALDDHAAYAASKGGLNALTKSLCAEWARHNVQVNAICPTVVMTPMGRAVWGKPEKGEPFRLATPARRFAEVHEVAEAALFLASPASDMINGHLLMVEGGFT 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12710.1700.1 >prot_H-paniculata_contig12710.1700.1 ID=prot_H-paniculata_contig12710.1700.1|Name=mRNA_H-paniculata_contig12710.1700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp MIAFARRFGIQPLTIFLLAQEGLGFVLRSDTTIVRLRGGAESDPSARQQQback to top mRNA from alignment at H-paniculata_contig12710:3196..6939- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12710.1700.1 ID=mRNA_H-paniculata_contig12710.1700.1|Name=mRNA_H-paniculata_contig12710.1700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3744bp|location=Sequence derived from alignment at H-paniculata_contig12710:3196..6939- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12710:3196..6939- >mRNA_H-paniculata_contig12710.1700.1 ID=mRNA_H-paniculata_contig12710.1700.1|Name=mRNA_H-paniculata_contig12710.1700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig12710:3196..6939- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |