mRNA_H-paniculata_contig12710.1700.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12710.1700.1
Unique NamemRNA_H-paniculata_contig12710.1700.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI)

HSP 1 Score: 424 bits (1090), Expect = 8.390e-144
Identity = 216/330 (65.45%), Postives = 257/330 (77.88%), Query Frame = 3
Query:  165 PLTIFLL----AQEGLGFVLRSDTTIVRLR--GGAESDPSA--------------RQQQELIGRGPLDPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYTCM 1094
            PL + LL    AQ  +G  + + T+   LR  GG+  D +A               +   +IGRGP +PVRPFVPDLL GK ALVTGGNRGIGEAITVALVKAGA VC+MA +E A+R MV RH G D  E  GNV+W++A+LR+PSEA+ GA+KAV WAGG++DILVNNAGI  +E+FM ISSD FDEVIA+NTRAPLLVSQVCL+GMIK + GKIVNI+S SAVI  +AHASY ASK+A+DG+  GLV DL++HNIQVNN+APT+AWSDMGIKTW DP KS+P L+ TP+GRFVE WE+ANMVVFL SDACTMCLGQTICVDGGYTC+
Sbjct:   12 PLVVLLLPLQQAQSFVGGAVSTTTSSANLRWRGGSSVDAAASTGPGEXXXXXXGQEESDVMIGRGPQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMVERH-GFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMIKNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 340          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA)

HSP 1 Score: 221 bits (564), Expect = 9.110e-66
Identity = 118/261 (45.21%), Postives = 164/261 (62.84%), Query Frame = 3
Query:  306 DPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            D   PF P LL  + A+VTGGN GIG AIT ALVKAGA   ++A S+  F  M+  H+ L     +G+  +I+A+L      +   + AV WA G +DILVNNAG+  +        +A+D+V+AVN RAP L++Q C  GMI+Q  GKI+NISS +  I    HA+Y ASK+A+D +TR +  + +KHNIQ N++ PT+  ++MG + W      +P    TP+GRF E  EVANMVV+LCSDA  +  GQT+ ++GG T
Sbjct:    4 DDTFPFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFL-----QGSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQRAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGGAA-GEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.570e-57
Identity = 109/264 (41.29%), Postives = 162/264 (61.36%), Query Frame = 3
Query:  300 PLDPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQ-EYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            P +P  P+  D+L GK A+VTGG+ GIG AIT+AL++AGA V ++A S   + ++V   +      DK    +I  +L       + A +A +WAGG  DILVNNAG+  +   +  S + +D  + VN RAP +++Q C K MI + + GKIV+ SS +++     HA+Y  SK+A+ G+T+ + A+ SK++I  N V PTI  +DMG K W +P K  P +D TPLGRF E WE+A+ VV+L S + +   GQ + +DGG T
Sbjct:    8 PAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDK--TTFISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGIT 269          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: UPI000402D86B (SDR family oxidoreductase n=1 Tax=Geminicoccus roseus TaxID=404900 RepID=UPI000402D86B)

HSP 1 Score: 184 bits (466), Expect = 2.580e-51
Identity = 115/255 (45.10%), Postives = 150/255 (58.82%), Query Frame = 3
Query:  342 GKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGN-VFWIKANLRIPSEAVEGAEKAVQWA---GGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYTCM 1094
            G+ ALVTG +RGIG      L  AGA +  +A    A  +  A      A E KG     I+A+L      VEG  +A Q A    GTIDILVNNAG+   E  +  S + FDEVIA+N RAPLL++Q+    MI Q  GKI+NISS + VI    HA+Y+ASK  L+ +T+ + A+LS HNIQVN V PT+  + MG K WSDP +  P L   PLGR  +  EVA++++FL S A  +  G  I +DGGYT +
Sbjct:   12 GRKALVTGASRGIGAEACRVLADAGADIVAVARDTAALAETKA------AVEAKGRRCLVIEADLAT----VEGGRRAAQQALEAWGTIDILVNNAGMGLAESVLDASMEHFDEVIAINLRAPLLMAQLLAPAMIAQRRGKIINISSQAGVIGLLEHATYAASKGGLNAMTKVMAAELSPHNIQVNTVCPTVIMTPMGEKHWSDPARLDPFLAKVPLGRVGQPIEVADLILFLASSASDLITGDDIMIDGGYTAL 256          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: D7G8H0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H0_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 8.290e-50
Identity = 102/253 (40.32%), Postives = 149/253 (58.89%), Query Frame = 3
Query:  333 LLKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQ-EYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            +L  K A+VTGG+ GIG +IT AL++AGA V ++A S   F  ++   +      DK    +I  +L    +    A +A  WAGG  DILVNNAG+  +   +  + + +D  + VN RAP +++Q C K MI + + GKIVN SS ++      HA+Y  SK+A++G+T+ + A+ SKH+I  N + PTI  +DM  K W  P K  P +D TPLGRF E WE+A+ VV+L S +     GQ + +DGG T
Sbjct:    1 MLADKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPVLEEKKLPVDK--THFIPIDLSSTDDIRRAAVEANDWAGGCADILVNNAGVATIAPILEATIEDWDWTMNVNVRAPFIMAQECAKRMIARGKGGKIVNTSSTASRFALHDHAAYCTSKAAINGLTKVMSAEWSKHDINCNTIGPTIVLTDMCTKAWGKPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSSIQMCGQMLLLDGGIT 251          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: UPI0013579E7C (SDR family oxidoreductase n=2 Tax=unclassified Geminicoccus TaxID=2623055 RepID=UPI0013579E7C)

HSP 1 Score: 179 bits (455), Expect = 1.060e-49
Identity = 104/249 (41.77%), Postives = 147/249 (59.04%), Query Frame = 3
Query:  342 GKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            G+ A VTG ++GIG      L  AGA +  +A   +   ++ A     D          ++A+L    E    A++A+  A GT+DILVNNAGI   E  +  S D+FD VIA+N RAPLL++Q+   GMI Q  GKI+NISS +A+I    HA+YSASK  L+ +T+ +VA+LS HNIQVN + PT+  + +G   W DP +  P +   PLGR  +  EVA++++FL S A  +  G  I +DGGYT
Sbjct:   12 GQKAFVTGASKGIGAEACRVLADAGADIVAVARDRDGLAEIKA-----DVEAKGRRCLVVQADLASVEEGRRAAKEALD-AWGTMDILVNNAGIGCGEPILEASMDSFDRVIAINLRAPLLLTQLLAPGMIAQRRGKIINISSQAAMIGLLGHATYSASKGGLNAMTKVMVAELSPHNIQVNTICPTVIMTPLGQAYWGDPARYDPFVAKVPLGRVGQPIEVADLILFLASPASDLITGDDIMIDGGYT 254          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A7C5IVK0_9HYPH (Glucose 1-dehydrogenase n=1 Tax=Devosia sp. TaxID=1871048 RepID=A0A7C5IVK0_9HYPH)

HSP 1 Score: 176 bits (446), Expect = 2.220e-48
Identity = 101/251 (40.24%), Postives = 149/251 (59.36%), Query Frame = 3
Query:  336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            L G+ ALVTG +RGIG  I      AGA +  +A  EEA   +       + R    N   + A+L         A+ A++  G TIDILVN+AGI  ++  + ++ + +D  +AVN RAP L+SQ     MI Q +GKI+NISS + VI  + HA+Y+ SK AL+ +T+ L+A+ ++HNIQVN + PT+  + MG + WS P KS P L  TPLGRF E  E+A++ ++L S A  +  G  I ++GG++
Sbjct:   10 LAGRTALVTGASRGIGAEICRVYADAGADIVAVARDEEALEGVAG-----EVRAKGRNCLTLTADLASTDGPGHAAKAALEQVG-TIDILVNSAGIALVDAALDLTLEQWDRTMAVNLRAPFLLSQALAPKMIAQRWGKIINISSQTGVIALKDHAAYATSKGALNALTKSLMAEWAEHNIQVNAICPTVVLTPMGKELWSPPEKSGPFLSKTPLGRFGEPVEIADLALYLASPAAELVNGSVIMIEGGFS 254          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A517VZM1_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZM1_9PLAN)

HSP 1 Score: 175 bits (444), Expect = 4.370e-48
Identity = 103/253 (40.71%), Postives = 155/253 (61.26%), Query Frame = 3
Query:  336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYTCM 1094
            +KGK ALVTG +RGIG  I + L +AGA+V I A   +   Q+  +   + +R +      I+A+L   +   E A+KA ++   TIDILVNNAG + +  F   + + +D++ AVN RAP ++S++  + M  Q+ GKI+NISS++ +     HA+YSASK  L+ +T+ + A+L   NIQ N VAPT+  +++G K W  P K +P  D  PL RF +  EVA++V++L S A  M  GQ I +DGGYT +
Sbjct:   10 VKGKTALVTGASRGIGAEIAMNLAQAGAEVLITARHHDDLIQVCEKIRSIGSRCEA-----IEADLISINGVEEVAQKAFEFFS-TIDILVNNAGTIEVAPFWETTVEDWDQMQAVNLRAPFILSKILSEPMRAQKQGKIINISSVAGIAALAGHAAYSASKGGLNQLTKVMAAELGPFNIQCNAVAPTVILTELGQKVWGSPEKGEPMKDKIPLHRFGKPLEVADLVLYLASPASDMMTGQVIALDGGYTAL 256          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: A0A832EU15_9RHOB (Glucose 1-dehydrogenase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A832EU15_9RHOB)

HSP 1 Score: 173 bits (439), Expect = 2.360e-47
Identity = 103/251 (41.04%), Postives = 145/251 (57.77%), Query Frame = 3
Query:  336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            L G+ ALVTG ++GIG  I      AGA +   A          A    ++AR  +   F       + + AV     A   A G IDILVNNAGIV +   + +S D +DE +AVN RAP ++SQV   GMI++  GKI+NISS + VI    HA+Y+ SK AL+ +T+ L+A+ + HNIQVN + PT+  + MG + WS P KS P +  TPLGRF E  E+A++ ++L S A  +  G  I ++GGY+
Sbjct:   10 LAGRTALVTGASKGIGAEICEVFADAGADIIATARDRSGLAATAA---AVEARGRRCRCFTCDL---VDAGAVRQMGLAALEAAGHIDILVNNAGIVRVAPAVDLSVDDWDETMAVNVRAPFVLSQVLAPGMIERRQGKIINISSQTGVIALADHAAYATSKGALNALTKSLMAEWAPHNIQVNAICPTVVLTPMGREVWSAPEKSAPFIAGTPLGRFGEPVEIADLALYLASPAAELVNGAVIMIEGGYS 254          
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Match: UPI001411D6C3 (glucose 1-dehydrogenase n=1 Tax=Rubellimicrobium sp. CFH 75288 TaxID=2697034 RepID=UPI001411D6C3)

HSP 1 Score: 171 bits (432), Expect = 2.420e-46
Identity = 101/252 (40.08%), Postives = 143/252 (56.75%), Query Frame = 3
Query:  336 LKGKHALVTGGNRGIGEAITVALVKAGAKVCIMANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAV-QWAGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGMIKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQVNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLCSDACTMCLGQTICVDGGYT 1088
            L G+ ALVTG +RG+G  I     +AGA +  +A  E    +     +G   R        I A+L  P   VE A +A+ +W  G ID+LVNNAGI  +     +S++ +DEV+AVN RAP L+++     MI Q  GKIV ISS + VI  + HA+Y+ASK  L+ +T+ L A+ ++HN+QVN + PT+  + MG   W  P K +P   +TP  RF E  EVA   +FL S A  M  G  + V+GG+T
Sbjct:    9 LAGRKALVTGASRGLGPGICDLFARAGADIVAVARDEGGLAETARLVEGHGRR-----CLAIPADLATPDGPVEAARRALAEW--GPIDVLVNNAGITRLAPATDLSTEQWDEVMAVNLRAPFLLARELAPAMIAQRRGKIVMISSQTGVIALDDHAAYAASKGGLNALTKSLCAEWARHNVQVNAICPTVVMTPMGRAVWGKPEKGEPFRLATPARRFAEVHEVAEAALFLASPASDMINGHLLMVEGGFT 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12710.1700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ4_ECTSI8.390e-14465.45Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835YTK4_9STRA9.110e-6645.21Putative short-chain dehydrogenase n=1 Tax=Tribone... [more]
D7G8H1_ECTSI1.570e-5741.29Similar to L-xylulose reductase (XR) (Dicarbonyl/L... [more]
UPI000402D86B2.580e-5145.10SDR family oxidoreductase n=1 Tax=Geminicoccus ros... [more]
D7G8H0_ECTSI8.290e-5040.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI0013579E7C1.060e-4941.77SDR family oxidoreductase n=2 Tax=unclassified Gem... [more]
A0A7C5IVK0_9HYPH2.220e-4840.24Glucose 1-dehydrogenase n=1 Tax=Devosia sp. TaxID=... [more]
A0A517VZM1_9PLAN4.370e-4840.713-oxoacyl-[acyl-carrier-protein] reductase FabG n=... [more]
A0A832EU15_9RHOB2.360e-4741.04Glucose 1-dehydrogenase n=1 Tax=Rhodobacteraceae b... [more]
UPI001411D6C32.420e-4640.08glucose 1-dehydrogenase n=1 Tax=Rubellimicrobium s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12710contigH-paniculata_contig12710:3196..6939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score425.6
Seed ortholog evalue2e-116
Seed eggNOG ortholog2880.D7FSQ4
Preferred nameDCXR
KEGG rclassRC00102,RC00154,RC01491
KEGG koko:K00081,ko:K03331
KEGG ReactionR01904,R02581,R09420
KEGG Pathwayko00040,ko00590,ko00980,ko01100,map00040,map00590,map00980,map01100
KEGG ModuleM00014
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004090,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005874,GO:0005881,GO:0005886,GO:0005902,GO:0005903,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006006,GO:0006063,GO:0006064,GO:0006082,GO:0006116,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0016655,GO:0019318,GO:0019321,GO:0019323,GO:0019362,GO:0019585,GO:0019637,GO:0019640,GO:0019674,GO:0019752,GO:0022607,GO:0032787,GO:0034641,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0043621,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046395,GO:0046483,GO:0046496,GO:0050038,GO:0051167,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072524,GO:0090407,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1901135,GO:1901137,GO:1901159,GO:1901360,GO:1901564,GO:1901575,GO:1901576
EggNOG free text desc.L-xylulose reductase (NAD ) activity
EggNOG OGsKOG1207@1,KOG1207@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-03_002930.1
EC1.1.1.10,1.1.1.184
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons7
Model size1434
Cds size966
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.8871148-UTR-H-paniculata_contig12710:3195..35041622928992.8871148-UTR-H-paniculata_contig12710:3195..3504Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12710 3196..3504 -
1691480694.1585603-UTR-H-paniculata_contig12710:3195..35041691480694.1585603-UTR-H-paniculata_contig12710:3195..3504Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12710 3196..3504 -
1622928992.8979697-UTR-H-paniculata_contig12710:3527..35551622928992.8979697-UTR-H-paniculata_contig12710:3527..3555Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12710 3528..3555 -
1691480694.172307-UTR-H-paniculata_contig12710:3527..35551691480694.172307-UTR-H-paniculata_contig12710:3527..3555Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12710 3528..3555 -
1622928993.0431757-UTR-H-paniculata_contig12710:6808..69391622928993.0431757-UTR-H-paniculata_contig12710:6808..6939Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12710 6809..6939 -
1691480694.2337556-UTR-H-paniculata_contig12710:6808..69391691480694.2337556-UTR-H-paniculata_contig12710:6808..6939Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12710 6809..6939 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928992.9098873-CDS-H-paniculata_contig12710:3555..37711622928992.9098873-CDS-H-paniculata_contig12710:3555..3771Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 3556..3771 -
1691480694.1804082-CDS-H-paniculata_contig12710:3555..37711691480694.1804082-CDS-H-paniculata_contig12710:3555..3771Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 3556..3771 -
1622928992.9289606-CDS-H-paniculata_contig12710:3931..40051622928992.9289606-CDS-H-paniculata_contig12710:3931..4005Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 3932..4005 -
1691480694.1884794-CDS-H-paniculata_contig12710:3931..40051691480694.1884794-CDS-H-paniculata_contig12710:3931..4005Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 3932..4005 -
1622928992.9442604-CDS-H-paniculata_contig12710:4453..45471622928992.9442604-CDS-H-paniculata_contig12710:4453..4547Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 4454..4547 -
1691480694.1964538-CDS-H-paniculata_contig12710:4453..45471691480694.1964538-CDS-H-paniculata_contig12710:4453..4547Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 4454..4547 -
1622928992.994781-CDS-H-paniculata_contig12710:4816..50811622928992.994781-CDS-H-paniculata_contig12710:4816..5081Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 4817..5081 -
1691480694.2039347-CDS-H-paniculata_contig12710:4816..50811691480694.2039347-CDS-H-paniculata_contig12710:4816..5081Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 4817..5081 -
1622928993.010635-CDS-H-paniculata_contig12710:5388..55551622928993.010635-CDS-H-paniculata_contig12710:5388..5555Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 5389..5555 -
1691480694.2129238-CDS-H-paniculata_contig12710:5388..55551691480694.2129238-CDS-H-paniculata_contig12710:5388..5555Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 5389..5555 -
1622928993.0249922-CDS-H-paniculata_contig12710:6658..68081622928993.0249922-CDS-H-paniculata_contig12710:6658..6808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 6659..6808 -
1691480694.2239692-CDS-H-paniculata_contig12710:6658..68081691480694.2239692-CDS-H-paniculata_contig12710:6658..6808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12710 6659..6808 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12710.1700.1prot_H-paniculata_contig12710.1700.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12710 3556..6808 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12710.1700.1

>prot_H-paniculata_contig12710.1700.1 ID=prot_H-paniculata_contig12710.1700.1|Name=mRNA_H-paniculata_contig12710.1700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp
MIAFARRFGIQPLTIFLLAQEGLGFVLRSDTTIVRLRGGAESDPSARQQQ
ELIGRGPLDPVRPFVPDLLKGKHALVTGGNRGIGEAITVALVKAGAKVCI
MANSEEAFRQMVARHDGLDAREDKGNVFWIKANLRIPSEAVEGAEKAVQW
AGGTIDILVNNAGIVAMEEFMGISSDAFDEVIAVNTRAPLLVSQVCLKGM
IKQEYGKIVNISSISAVITPEAHASYSASKSALDGITRGLVADLSKHNIQ
VNNVAPTIAWSDMGIKTWSDPVKSQPRLDSTPLGRFVECWEVANMVVFLC
SDACTMCLGQTICVDGGYTCM*
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mRNA from alignment at H-paniculata_contig12710:3196..6939-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12710.1700.1 ID=mRNA_H-paniculata_contig12710.1700.1|Name=mRNA_H-paniculata_contig12710.1700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3744bp|location=Sequence derived from alignment at H-paniculata_contig12710:3196..6939- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCAAGCAATCTGGTTTGGGCCAGCAGATAAACGCTGCTAGAAAATATCA ACTGAACCATTGAAGCACACCTCAGGCTGGGAACGCTCGCATCTGATCTA CCAACGCCCGGAAACTATCGTATCCGAAACAATGATCGCATTCGCCCGTC GTTTCGGGATACAACCCTTGACCATCTTCCTGCTGGCACAAGAAGGCCTT GGTTTCGTGCTCCGTAGTGATACCACCATTGTTAGGTTGCGTGGAGGTGC GGAATCTGATCCAAGCGCGAGGCAACAGCAGGTACACGTCCATTGGGATA ACGTGTGGAGTGTAGAGAGTTCATGATTCTGATGTGAGACACTTTGATCT GATTTGAGACTTCATGATCTGACGTTCTGCGCATGTTTCTGCCCTCTAGA TTTGGGCTGTGCAGAATGTTCATCTCGAGCAAGGGGGTGGTATCTATCAT CAGGCAGCTACTATACTGACTGTATAGCCCCGATTTGATCCCCAGCTCTA GTTAATACGCGCATACAACTGAGATTTGAGGTTATCTGCATAGCCTCAAC AAGGGTACGATGGAATTATCATATGAGTGTTATAGATCTACTAACCGTAG GAAGTCGGTTGACTCGTGAATGAGACTTGCAGTAGGCGTATAGGGCATTT CATTTTTGTCAGGCGTTCACGTGCGAGCTGTCTCATTTTTACACATAGTA CACACACGAATGATATAGTATTGATACTCTAATTCCCCCCTCGGCGATTG TCTCATGGATATGACAGACCCGAGATCAGTTGGTGCAGAAATTGGAAATT GATGTCATAATAATCCAGTTATTTCTTTCGTTACAAGGCCCACTTCGACG GATAATAGTGATGTATGTGCCAGAGGGCTTCTAGAGCACTAATGTCTGAA GCCGGGGATATTAGGGATACTGGCAACCCCCCCCCCCCCCCCCAACCCTT CCTCCTCCACGTGTTGGCCCTTAAGTGTCTGGGGACCTAAGCGCCTAAGC TGAGAGATATGGTCCCTCTAGCCTCCGGCTCTTACAACTGCCCGCACCGC AGAAATGGTCGCGATTCTGATATTTTTCATCAATATATACTACTCGCGCT GTTGCCTCTTGAACGTCTAATCAGTGTCGGGTGTCAGCGAGGTAGGCTCA TTGAGCTTGGAACAGCAGTCCCAAACCCTATATTTACGAGTGGAACAGTT GGTACAGCAGTCTCATGTTTCTGGCCTGCAGTTGCACATTCTTACTCTAG CGACAGCATCAGAGACAGAGAAATCAGGCGTGGGCTTTAGATCGAGTATG CATAGCATGCCACGCCCTCGAGAGTAATTGTTTCAGAGTGCACATACTCC CTGTTCATCTGCGCGGAAACGTTGCGCTCAGCAGGAGCTCATTGGACGAG GGCCTCTTGACCCTGTTCGACCATTTGTTCCGGACCTGCTCAAGGGAAAG CATGCGTTGGTCACGGGCGGCAATCGAGGTATCGGGGAAGCTATTACAGT AGCTCTGGTTAAGGCAGGCGCCAAGGTCTGCATCATGGCCAATAGTGAGG AGTGAGTTTCATATACTGTGCCCGGATTGCAGTCCAGGGCAATCCCTTCT GTTCCATTTTTACTTCCCAGAGGCATCCCTAAGATTTAGTGCGTAGGAGA TCGACTGGGTTGCAAATGGCAGCATGCCGACTGAAGGGATAGTTTTCGAT TGTGACTCCGAGGTAATCGGACCAGGCAATAGAAGAGAAGGGGTCGGTAC GCGTAATGTAGGGAACGTTGCGTCGACTGGCGATTAGCGATATCATGAAA TATATCGTCGTAGTTATGATCACTCTCAACTTTAACCCGGACCTTAACCC TCCCGCAGGGCGTTCCGGCAGATGGTAGCGAGACACGACGGACTCGATGC GCGGGAAGACAAGGGGAATGTTTTCTGGATAAAAGCAAACTTGAGGATAC CGTCCGAAGCAGTGGAAGGTGCCGAAAAGGCCGTGCAGTGGGCGGGTGGT ACTATCGATATATTGGTGAACAACGCTGGGATCGTTGCGATGGAGGAATT CATGGGCATCTCGAGTGATGCCTTCGATGAAGTTATCGCCGTTAACACAA GAGCTCCGCTTCTCGTGTCTCAGGTATGCGGTTTGGAAGAAGTACCTCAG TGTTTTGTTGGATGTGGCATTCATTTGCGCAGGAGAGAATGGGGTGCGCA AATTTAACTTCTTGGGTCAATCTATGGAGTCGACTGGAATCTACAATGTT TCAGATGATCTCTGGTGTGCGGTGACGACTTACTATTTTTTGGGCCCAAC ACGCTAGTGTCAGGTACGGTGATTTACAGCTTCACAAGGCTAGGAGTCGT TATGTCCTATTTTTATCACCTTTTTTTTTTCGTGTGTTGTAGGTATGCCT GAAGGGTATGATCAAGCAGGAATACGGCAAGATCGTGAACATCTCTTCAA TAAGCGCCGTCATTACACCGGAAGCGCACGCATCATGTGAGCAATCCTTG CGACCTCAACATTTTGCGTGAAATACCTCGGGGTCGCTCTCTCTCTTTTC TCTCTTACTCAGCTCTTTGCCGTGCCCTGTTCATGGGCATGCCTGCGAGC GACATCGAGGTCGCCTTCGTGTGCACGGTCTGAATGTTATACCTAACATA AACAAGTCCAGTAGGCGGGTCAGATCGGTTAGCGCAACGGTTCCGGTTTA CGGCAAAATTGGATTTAGCGTGTCGTGTACTGCGCTCTTTGGCCGGTAGC ATAGCTTTTTCAACAGGAGGGAGTGGCGAAAAGCGCGTTATTTTGAAAAA TGAAACACGTCGCAGGTTCTATAGGATCAAGGTGCACAGTTCTTGCGAGG CTGGTAACTTGGGCTCTACCGTGTTTCCTCTGAGCCATTTGTATTGTTAC CAAGGTGGTTGTGTGCTCGTTTTACTTGTCGCAGATAGCGCATCGAAGAG TGCCTTGGATGGCATAACGCGTGGACTAGTGGCCGACCTCTCGAAGCACA ACATACAGGTGTGTGCCGTTTGGTATCGCATCATCACATTCGTTTTCATG CCTGGTCAAGGGTGTCCCAAACTGTGTGCCCGAGATCGGCGTTTGTATGC ACTCCTAGTCTGGATTTTTTTTTCCTGTGGTAGCGCGTTGATATCGTCGT TGTTTTCGCCCCATGCAGGTGAACAATGTGGCTCCCACCATAGCATGGAG TGACATGGGCATAAAAACCTGGAGCGATCCTGTCAAGTCGCAGCCGAGGC TCGACTCTACACCTCTCGGTCGGTTTGTGGAGTGCTGGGAAGTGGCCAAC ATGGTGGTGTTCCTATGCAGCGACGCCTGCACCATGTGTCTCGGACAGAC CATATGCGTTGACGGTGGATACACTTGCATGTAAACCAACGGATGTTCAG GCAGAGTCGTGAATGGCTTACCCCACTGTGTCCAACTTGGTCGCGTTCGA GTTTTGGAGTTGGTCAAGGATGGACAACATGAAATTCGCCGTGCGCGTTA CAATCGTACGTGCGATTGTTCGGCTCGGCCAAATAGTGGACAAGAGGACT TACACGTGAATTCGTGTCTTGTTGCTTGTCATGTACGAGAGAGGCCTCCC GCTGCGGTGCGCCTGTCAAGGGCTGCATGGAATGTCACGTTTCAATTTTT TCTCTTGCGGCATTGAGTACAGTAGAGCTCGGCCGCTAGGTTCAACCTAC ACGTAGTACGTAGATGGCGATAATGCGCTGCCACTTGTGATGCC
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Coding sequence (CDS) from alignment at H-paniculata_contig12710:3196..6939-

>mRNA_H-paniculata_contig12710.1700.1 ID=mRNA_H-paniculata_contig12710.1700.1|Name=mRNA_H-paniculata_contig12710.1700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig12710:3196..6939- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATCGCATTCGCCCGTCGTTTCGGGATACAACCCTTGACCATCTTCCT
GCTGGCACAAGAAGGCCTTGGTTTCGTGCTCCGTAGTGATACCACCATTG
TTAGGTTGCGTGGAGGTGCGGAATCTGATCCAAGCGCGAGGCAACAGCAG
ATGATCGCATTCGCCCGTCGTTTCGGGATACAACCCTTGACCATCTTCCT
GCTGGCACAAGAAGGCCTTGGTTTCGTGCTCCGTAGTGATACCACCATTG
TTAGGTTGCGTGGAGGTGCGGAATCTGATCCAAGCGCGAGGCAACAGCAG
GAGCTCATTGGACGAGGGCCTCTTGACCCTGTTCGACCATTTGTTCCGGA
CCTGCTCAAGGGAAAGCATGCGTTGGTCACGGGCGGCAATCGAGGTATCG
GGGAAGCTATTACAGTAGCTCTGGTTAAGGCAGGCGCCAAGGTCTGCATC
ATGGCCAATAGTGAGGAGAGCTCATTGGACGAGGGCCTCTTGACCCTGTT
CGACCATTTGTTCCGGACCTGCTCAAGGGAAAGCATGCGTTGGTCACGGG
CGGCAATCGAGGTATCGGGGAAGCTATTACAGTAGCTCTGGTTAAGGCAG
GCGCCAAGGTCTGCATCATGGCCAATAGTGAGGAGGCGTTCCGGCAGATG
GTAGCGAGACACGACGGACTCGATGCGCGGGAAGACAAGGGGAATGTTTT
CTGGATAAAAGCAAACTTGAGGATACCGTCCGAAGCAGTGGAAGGTGCCG
AAAAGGCCGTGCAGTGGGCGGGTGGTACTATCGATATATTGGTGAACAAC
GCTGGGATCGTTGCGATGGAGGAATTCATGGGCATCTCGAGTGATGCCTT
CGATGAAGTTATCGCCGTTAACACAAGAGCTCCGCTTCTCGTGTCTCAGG
GCGTTCCGGCAGATGGTAGCGAGACACGACGGACTCGATGCGCGGGAAGA
CAAGGGGAATGTTTTCTGGATAAAAGCAAACTTGAGGATACCGTCCGAAG
CAGTGGAAGGTGCCGAAAAGGCCGTGCAGTGGGCGGGTGGTACTATCGAT
ATATTGGTGAACAACGCTGGGATCGTTGCGATGGAGGAATTCATGGGCAT
CTCGAGTGATGCCTTCGATGAAGTTATCGCCGTTAACACAAGAGCTCCGC
TTCTCGTGTCTCAGGTATGCCTGAAGGGTATGATCAAGCAGGAATACGGC
AAGATCGTGAACATCTCTTCAATAAGCGCCGTCATTACACCGGAAGCGCA
CGCATCATGTATGCCTGAAGGGTATGATCAAGCAGGAATACGGCAAGATC
GTGAACATCTCTTCAATAAGCGCCGTCATTACACCGGAAGCGCACGCATC
ATATAGCGCATCGAAGAGTGCCTTGGATGGCATAACGCGTGGACTAGTGG
CCGACCTCTCGAAGCACAACATACAGATAGCGCATCGAAGAGTGCCTTGG
ATGGCATAACGCGTGGACTAGTGGCCGACCTCTCGAAGCACAACATACAG
GTGAACAATGTGGCTCCCACCATAGCATGGAGTGACATGGGCATAAAAAC
CTGGAGCGATCCTGTCAAGTCGCAGCCGAGGCTCGACTCTACACCTCTCG
GTCGGTTTGTGGAGTGCTGGGAAGTGGCCAACATGGTGGTGTTCCTATGC
AGCGACGCCTGCACCATGTGTCTCGGACAGACCATATGCGTTGACGGTGG
ATACACTTGCATGTAAGTGAACAATGTGGCTCCCACCATAGCATGGAGTG
ACATGGGCATAAAAACCTGGAGCGATCCTGTCAAGTCGCAGCCGAGGCTC
GACTCTACACCTCTCGGTCGGTTTGTGGAGTGCTGGGAAGTGGCCAACAT
GGTGGTGTTCCTATGCAGCGACGCCTGCACCATGTGTCTCGGACAGACCA
TATGCGTTGACGGTGGATACACTTGCATGTAA
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