prot_H-paniculata_contig9161.16974.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9161.16974.1
Unique Nameprot_H-paniculata_contig9161.16974.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1431
Homology
BLAST of mRNA_H-paniculata_contig9161.16974.1 vs. uniprot
Match: A0A6H5KK87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK87_9PHAE)

HSP 1 Score: 383 bits (984), Expect = 3.050e-109
Identity = 316/821 (38.49%), Postives = 413/821 (50.30%), Query Frame = 0
Query:  496 CSPSNAGRLSGGGTTGEDVDRVDALLLNLSRVMESLLRMVEEWILTGYPGVSGMRGGGVGCRSSSHG-------NVPGEPGILLAELVFGSYERILLDQHNLTARSDSFGSGIAFASCVGVAIDSILAVLDDKAVSTRWTLNGGSFGVARDVCSHS--NRRSSRLATVPRDRDV----GRGYSE-EGRMVEGMEVNAADDHGPDSSPAPDAATLCLDTILTTVVAFDLVVWLLDLYKRCGINFDANDDEDTDTRQPVPVESDDGIGP-----GTRAKKLLAEVLQSLLYAQGWVNGLCSPDTDCPNSNEMELSPG---LAETVKRVLPTWH----SQHHQQSVPFDHHVISLLGTGEDNGGLCKLVLLLMSFSPSCLGVLHPHLHCRVDSAVTILRYIKSVPEAVFCLNLLAQIAMVTS-RTGGGTFGAL--QLDEHLVEAIEALLSRFSVAEVAFVEILLSPGALSFILRAGCLAFTADWMVTATRGRIKRVLFDLGLPLNDYPQGCVDHNEADHYDADIDTDVCRRADEPALTGILEAAVRRWGDLLYIDSDKRPDIGSEGTICRLSWVLLLAPDAFFRLAFDSDGYDDSGTTSNTVL-NILAVVIPDTLSKLSMSSTRSWALLGGGGAVGETSVNGQQALI---IACTTHVLRLASAYLRARCAHGFYSTLSEGIRNHFETASWASDPSAPTLGVKIANACTELLVEVLSPRWRRLGSGXXXXXXXXXXXXXXXXADNTARIIAGVLVDVLNLLNALLVLLAAEAPRLPAHSHSESLASALGEAREALAE--GNRFCSTERGHDWLDHEPKTLAAYLQ 1281
            C  S  GR   G   G D      L+L  +RV ESLL   EEW+ +      G   GG+ C++S++           GE  + LA+LVFGSYER L  Q NL ARS++    +A+ SC+G A+D+  AVL  K        +GG       + S    N R S + T   DRD     G G S   G  V G E   +   G  S PA      CL TIL  VV  D+V W+L+LY RCG       D  +      P  S +G        G     LL EVLQSLL+AQGWVNG+C+     P S+EME         ETV+ +L +W     S   +  +P DH V+S LG   DNG LCKLV+LL+S SPS LGVLHPH+ CR+DSAVT+LRYIK+VPEAVFCLNL + I +V   +  GG  G L  +L E L  A++ LL+RFSV EVA   I LS  A+SF L AGC AF +DW+V A   R+KR L + G       QG  D + AD         V   ++  AL GIL A +RRW      DS       S+  I RL+ VLL++PD    LAFDSD + +        L + LA +IP+TL  LS + +           V   S  G    +   + C + V ++ASA+L ARC +G+Y+T+   +R     AS    P  P     +A AC  LL  +L    +R G G                 D+T +     L+ VLNLL ALLVL+  ++  L     ++ L  AL E+  AL+E   +   +TER   WLDH P  LAA+LQ
Sbjct:    2 CDKSGGGRSWPGQQEGHDDG---GLVLQCARVYESLLHTAEEWVSS-----QGSTVGGMSCQASANRFGGGGRRGTRGEESVSLADLVFGSYERTLSYQCNLIARSENLAHDVAWLSCLGAAVDATSAVLFHKRXXXXXXXSGGRTSKNGTMGSWQLFNVRPSFVNTQELDRDCVGFPGSGGSRASGGAVGGGEQEYSIAPGEVSIPAS-----CLGTILKMVVEADVVSWMLNLYARCG------GDRSSGGTTTHPSRSSEGSSDVVDAHGATTCALLMEVLQSLLHAQGWVNGVCAHGAGRP-SHEMECGDRGSTFGETVRLMLQSWTTRGVSSGEEVHMPLDHFVMSQLGKRADNGDLCKLVVLLVSVSPSFLGVLHPHVGCRIDSAVTLLRYIKTVPEAVFCLNLFSHIILVEGDKIDGGRGGELSSRLGEDLSAAVKDLLARFSVEEVALSLIPLSASAISFALLAGCEAFVSDWLVAAPLARVKRALTEFGAFCE--RQGATDDDIADL--------VAGCSERVALKGILGATLRRWRVEAGKDSPHHSQ--SDAVIYRLACVLLMSPDTLLSLAFDSDSHPNGPMDLEQELASALATIIPETLEGLSAALSP---------VVSRHSDRGNTNYLASKLECASCVSQIASAFLHARCTYGYYTTIDRDVRARTGFASCQEPPEIP-----LARACGGLLQGLLR---QRRGQGSFGDG-----------GDSTFK----ALLSVLNLLGALLVLVGRDSFLL--RKTNQGLVLALQESCAALSEMLASTAVATERLTGWLDHAPDVLAAFLQ 756          
BLAST of mRNA_H-paniculata_contig9161.16974.1 vs. uniprot
Match: D8LNY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY6_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 2.470e-80
Identity = 186/399 (46.62%), Postives = 229/399 (57.39%), Query Frame = 0
Query:    1 LKNELPDPIGTLAALVFRTLSLGIPRASGHLFAIGQLLSNAWKIPPLATSLADACMAD----------------------AAAAGXXXXXXXXXXXXXXXXXXXLAHAASSCSASDQVKSDVIFVLMELLQCCLAVAALDYRPCGAGSLQPPPPAAADPFVSVMLAVPRLLARRSSSDEPLQLHSVAYVATAAAYCRQRTDSGAPGWCANNTTGVPDVLVALFDGGTGSDRVPRDGVPA------SNTQRSGG-LCGSLKSLLMSSSYRVRAATSQLITTLCSS---GGDQHLACNANGAHKYVNCSAGRTGGAXXXXXAADGDITQRSLLLGSFFRERLIAAGVTDFLFEAIKKEREGTPGHYLEAVEALSLSSVEFFHSRNFSMKFAAPILLAAARG 367
            LK+ELPDP+  L +L+  T+SLG+PRASGHL+ +G+LL+NA     LA +L ++C                           + G                   LA  A S S SD  KSDV+FV +ELL CC AV  +       G L PPPP   DPFVS+MLA+PRLLARRSSSDE LQLH +AY+AT A YCRQRT+ G PGW ++N  GVPDVL  LF+G    +  PR+ +P       S    SGG LC +LK+LLMSSSYRVR+AT++LIT+LC     G D  L      AH+     + R G +                    FFRE L+AAG TDFLFEAIK EREG+  +YLEA +A + S VEFFH+ NF MKFAAPILL A RG
Sbjct:   24 LKDELPDPVAVLTSLISSTVSLGLPRASGHLYLVGKLLANASYDRALAATLGNSCFGRRDGHGQRQQQTLVIGDRSGQGIVPSHGGSGVETRDEGEELRGFGAFLAAQALSTSCSDHTKSDVLFVALELLDCCTAVC-MGAGIAPQGPLMPPPPGG-DPFVSIMLALPRLLARRSSSDELLQLHGIAYLATVARYCRQRTEMGVPGW-SSNRDGVPDVLAELFEGAR--EATPREVLPTGGGGEGSKQSFSGGMLCSTLKTLLMSSSYRVRSATARLITSLCRDVPFGEDSEL------AHENAAMGSRRNGSSL-------------------FFREILLAAGSTDFLFEAIKSEREGSTRYYLEAADAFASSPVEFFHADNFCMKFAAPILLDAFRG 392          
BLAST of mRNA_H-paniculata_contig9161.16974.1 vs. uniprot
Match: D8LNY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY5_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 2.740e-79
Identity = 207/510 (40.59%), Postives = 265/510 (51.96%), Query Frame = 0
Query:  496 CSPSNAGRLSGGGTTGEDVDRVDALLLNLSRVMESLLRMVEEWILTGYPGVSGMRGGGVGCRSSSHGNVP--------------GEPGILLAELVFGSYERILLDQHNLTARSDSFGSGIAFASCVGVAIDSILAVLDDKAVSTRWTLNGGSFGVARDVCSHS--NRRSSRLATVPRDRDVGRGYSEEGRMVEGMEVNAADDHGPDSSPAPDAATLCLDTILTTVVAFDLVVWLLDLYKRCGINFDANDDEDTDTRQPVPVESDDGIGPGTRAKKLLAEVLQSLLYAQGWVNGLCSPDTDCPNSNEMELS---PGLAETVKRVLPTWHSQH----HQQSVPFDHHVISLLGTGEDNGGLCKLV---------------LLLMSFSPSCLGVLHPHLHCRVDSAVTILRYIKSVPEAVFCLNLLAQIAMVTS-RTGGGTFGAL--QLDEHLVEAIEALLSRFSVAEVAFVEILLSPGALSFILRAGCLAFTADWMVTATRGRIKRVLFDLG 964
            C  S  GR   G   G D      L+L  +RV ESLL   EEW+ +      G   GG  C++S+                   GE  + LA+LVF SYER L  Q NL A+S++    +A+ SC+G A+D+  AVL  K         GG       + S    N R S + T   DRD   G    G  V G E   +   G  S PA      CL+TIL  VV  D+V W+LDLY +CG +  +     T + Q     SD     G     LL EVLQSLL AQGWVNG+C+   D P S EME     P + ETV+ +L +W ++      +  +P D HV+S LG   DNG LCKLV               +LL+S SPS LGVLHPH+ CR+DSAVT+LRYIK++PEAVFCLNL + I +V   +  GG  G L  +L E L  A++ LL+RFSV EVA   I LS  A+SF L AGC AF ++W+V A   R+KR L + G
Sbjct:    2 CDKSGGGRSWPGQQEGHDDG---GLVLQCARVYESLLHTAEEWVSS-----QGSTVGGTSCQASAXXXXXXXXXXXXXXRRGFRGEESVGLADLVFSSYERTLSYQCNLIAQSENLTHDVAWLSCLGAAVDATSAVLFHKRRREEAAARGGRTSKNGTMGSWQLLNVRPSFVNTQELDRDCSGGSGASGGAVGGGEQEYSIAPGEVSIPAS-----CLETILKVVVEADVVSWMLDLYAQCGGDTSSGGTT-THSSQSSERSSDVVDAHGATTCALLMEVLQSLLDAQGWVNGVCAHGADRP-SYEMECGGRGPTIGETVRLMLQSWTTRGVSGAEEVHMPLDQHVMSQLGKRADNGDLCKLVWWYRGRYNRVEAKQKVLLVSVSPSFLGVLHPHVGCRIDSAVTLLRYIKTLPEAVFCLNLFSHIVLVEGDKIDGGRGGELSSRLSEDLSAAVKDLLARFSVEEVALSLIPLSASAISFALLAGCEAFVSNWLVAAPLARVKRALTEFG 496          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9161.16974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KK87_9PHAE3.050e-10938.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNY6_ECTSI2.470e-8046.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNY5_ECTSI2.740e-7940.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1229..1431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1207..1228
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9161contigH-paniculata_contig9161:455..7997 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9161.16974.1mRNA_H-paniculata_contig9161.16974.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9161 455..7997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9161.16974.1 ID=prot_H-paniculata_contig9161.16974.1|Name=mRNA_H-paniculata_contig9161.16974.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1431bp
LKNELPDPIGTLAALVFRTLSLGIPRASGHLFAIGQLLSNAWKIPPLATS
LADACMADAAAAGGTGGHGGGGVTAFGGFASFLAHAASSCSASDQVKSDV
IFVLMELLQCCLAVAALDYRPCGAGSLQPPPPAAADPFVSVMLAVPRLLA
RRSSSDEPLQLHSVAYVATAAAYCRQRTDSGAPGWCANNTTGVPDVLVAL
FDGGTGSDRVPRDGVPASNTQRSGGLCGSLKSLLMSSSYRVRAATSQLIT
TLCSSGGDQHLACNANGAHKYVNCSAGRTGGAGGAGGAADGDITQRSLLL
GSFFRERLIAAGVTDFLFEAIKKEREGTPGHYLEAVEALSLSSVEFFHSR
NFSMKFAAPILLAAARGDRTDKKKLGGGGSRVFAVSSRLLLQALVSTPSA
STTGFVEEFLSVTASSHQSAVGWNSAIGVAADVLNLMSSGDVRFPKDPEN
LFDAIAQLLERIEDTLQCTTQEASGYAAPAPPLAVEAASPTRPCKCSPSN
AGRLSGGGTTGEDVDRVDALLLNLSRVMESLLRMVEEWILTGYPGVSGMR
GGGVGCRSSSHGNVPGEPGILLAELVFGSYERILLDQHNLTARSDSFGSG
IAFASCVGVAIDSILAVLDDKAVSTRWTLNGGSFGVARDVCSHSNRRSSR
LATVPRDRDVGRGYSEEGRMVEGMEVNAADDHGPDSSPAPDAATLCLDTI
LTTVVAFDLVVWLLDLYKRCGINFDANDDEDTDTRQPVPVESDDGIGPGT
RAKKLLAEVLQSLLYAQGWVNGLCSPDTDCPNSNEMELSPGLAETVKRVL
PTWHSQHHQQSVPFDHHVISLLGTGEDNGGLCKLVLLLMSFSPSCLGVLH
PHLHCRVDSAVTILRYIKSVPEAVFCLNLLAQIAMVTSRTGGGTFGALQL
DEHLVEAIEALLSRFSVAEVAFVEILLSPGALSFILRAGCLAFTADWMVT
ATRGRIKRVLFDLGLPLNDYPQGCVDHNEADHYDADIDTDVCRRADEPAL
TGILEAAVRRWGDLLYIDSDKRPDIGSEGTICRLSWVLLLAPDAFFRLAF
DSDGYDDSGTTSNTVLNILAVVIPDTLSKLSMSSTRSWALLGGGGAVGET
SVNGQQALIIACTTHVLRLASAYLRARCAHGFYSTLSEGIRNHFETASWA
SDPSAPTLGVKIANACTELLVEVLSPRWRRLGSGGGGGGGGGINDNDDDD
ADNTARIIAGVLVDVLNLLNALLVLLAAEAPRLPAHSHSESLASALGEAR
EALAEGNRFCSTERGHDWLDHEPKTLAAYLQFCVLWNTVGLPAVRAFHHG
GRAFERLEPPCNVLDRILSGSSLHCSGSSGGSTWGSTASLVQTRVRRSVL
HVLAARCIESAAPQRPFSRAQVLSFQLALQGVACDGDGMSTPAALAAIVA
LWEAYSAVLRSIDLFDQPWNEFTVECCFERA
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