prot_H-paniculata_contig9154.16969.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9154.16969.1
Unique Nameprot_H-paniculata_contig9154.16969.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: D7FN73_ECTSI (AMP-binding enzyme family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN73_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 3.990e-26
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    1 RFGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            RFGKSL+SLGFAPHR INI+GFNSAEWFIANMGAIAAGGIAAGIY SNLPE
Sbjct:    5 RFGKSLMSLGFAPHRSINIIGFNSAEWFIANMGAIAAGGIAAGIYTSNLPE 55          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: D7G3T1_ECTSI (Long chain acyl-coA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T1_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 8.780e-23
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0
Query:    1 RFGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            RFGKSLLSL FAPHRC+NI+GFNS EWFIANMGAIAAGGIAAGIY SNLPE
Sbjct:   78 RFGKSLLSLDFAPHRCVNIIGFNSTEWFIANMGAIAAGGIAAGIYTSNLPE 128          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A6H5KWQ0_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ0_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.450e-21
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0
Query:    1 RFGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            RFGKSL+SLGFAPHR INI+GFNS EWFIANMGAIAAGGI AGIY SNLPE
Sbjct:   78 RFGKSLMSLGFAPHRSINIIGFNSTEWFIANMGAIAAGGIPAGIYTSNLPE 128          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A835Z6J1_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.900e-19
Identity = 38/51 (74.51%), Postives = 45/51 (88.24%), Query Frame = 0
Query:    1 RFGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            +F K+L+SLGFAPHRC+NI+GFNS EWF+A MG I AGGIAAGIY +NLPE
Sbjct:   74 KFAKTLMSLGFAPHRCVNIIGFNSVEWFVAEMGCILAGGIAAGIYTTNLPE 124          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A7S2K6B1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K6B1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 4.250e-17
Identity = 38/50 (76.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    2 FGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            F KSL+SLGF  H CINI+GFNS EWF AN G IAAGGIAAGIY +NLPE
Sbjct:   78 FAKSLISLGFEKHDCINIIGFNSPEWFFANFGTIAAGGIAAGIYTTNLPE 127          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A7S2H745_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H745_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.540e-15
Identity = 34/50 (68.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    2 FGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            F KSLLS+GF     +NI+GFNS EWF +N GAIAAGGIAAGIY +NLP+
Sbjct:    6 FAKSLLSIGFERFDAVNIIGFNSPEWFFSNFGAIAAGGIAAGIYTTNLPD 55          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A8J9T1U7_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9T1U7_PHATR)

HSP 1 Score: 71.2 bits (173), Expect = 3.360e-14
Identity = 33/50 (66.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 FGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            FGK+LL +GFA    INI+GFN+ EWF AN GAIAAGGI AG+Y +N PE
Sbjct:   24 FGKALLKVGFARFDTINIIGFNAPEWFFANFGAIAAGGIPAGVYTTNNPE 73          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A6U1PAC9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PAC9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.750e-13
Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    1 RFGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            +F ++L++L F PH C+NI+GFN  EWF+A  GA+AAGGI AGIY +N P+
Sbjct:   78 KFAQALVALNFPPHACLNIIGFNCKEWFVAQFGAMAAGGIPAGIYPTNGPD 128          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: B7FXX6_PHATC (Long chain acyl-coa synthetase n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXX6_PHATC)

HSP 1 Score: 71.2 bits (173), Expect = 3.610e-13
Identity = 33/50 (66.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 FGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            FGK+LL +GFA    INI+GFN+ EWF AN GAIAAGGI AG+Y +N PE
Sbjct:   80 FGKALLKVGFARFDTINIIGFNAPEWFFANFGAIAAGGIPAGVYTTNNPE 129          
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Match: A0A1Z5J6E1_FISSO (Long-chain-fatty-acid--CoA ligase ACSBG n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6E1_FISSO)

HSP 1 Score: 71.2 bits (173), Expect = 3.610e-13
Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:    2 FGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLPE 51
            FGK+LLS+GF     +NI+GFNS EWFI N GA+AAGG+A+GIY +N PE
Sbjct:   79 FGKALLSIGFERFDTVNIIGFNSPEWFICNFGAMAAGGVASGIYTTNGPE 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9154.16969.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN73_ECTSI3.990e-2692.16AMP-binding enzyme family protein n=1 Tax=Ectocarp... [more]
D7G3T1_ECTSI8.780e-2390.20Long chain acyl-coA synthetase n=1 Tax=Ectocarpus ... [more]
A0A6H5KWQ0_9PHAE1.450e-2188.24AMP-binding domain-containing protein n=1 Tax=Ecto... [more]
A0A835Z6J1_9STRA2.900e-1974.51Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A7S2K6B1_9STRA4.250e-1776.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2H745_9STRA5.540e-1568.00Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A8J9T1U7_PHATR3.360e-1466.00Hypothetical protein (Fragment) n=1 Tax=Phaeodacty... [more]
A0A6U1PAC9_9STRA2.750e-1356.86Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
B7FXX6_PHATC3.610e-1366.00Long chain acyl-coa synthetase n=3 Tax=Phaeodactyl... [more]
A0A1Z5J6E1_FISSO3.610e-1364.00Long-chain-fatty-acid--CoA ligase ACSBG n=2 Tax=Fi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042099AMP-dependent synthetase-like superfamilyGENE3D3.40.50.12780coord: 1..51
e-value: 2.0E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR43272:SF32LONG-CHAIN-FATTY-ACID--COA LIGASE ACSBG2coord: 2..51
NoneNo IPR availablePANTHERPTHR43272FAMILY NOT NAMEDcoord: 2..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..51
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 1..47
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9154contigH-paniculata_contig9154:6026..6178 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9154.16969.1mRNA_H-paniculata_contig9154.16969.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9154 6026..6178 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9154.16969.1 ID=prot_H-paniculata_contig9154.16969.1|Name=mRNA_H-paniculata_contig9154.16969.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
RFGKSLLSLGFAPHRCINILGFNSAEWFIANMGAIAAGGIAAGIYMSNLP
E
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042099AMP-dep_Synthh-like_sf