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Homology
BLAST of mRNA_H-paniculata_contig9150.16967.1 vs. uniprot
Match: D8LGD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD8_ECTSI) HSP 1 Score: 263 bits (672), Expect = 3.470e-83 Identity = 128/183 (69.95%), Postives = 146/183 (79.78%), Query Frame = 1
Query: 7 RFLRHTMQADESAVVVSYPHFFGHPLERHIALRHAFLEASGRPSGTRLVDDNCRGLRRMLELPVNRRGNKTKHWMAPGRDVSDYRRFEQGFLRGPFDAARRGDAQTLRLLRSHGWDCFEEDRRGRNALFWAAGGGHIKACEALTEPPGGLRADTNASDLSTPLHWAATGVEAKRFGTGGHVDV 555
RFLRHT+ A+ V VS+P FFGHPLER IA RHAFL ++GRPSG RL++ CRGLRRMLELPVNR + M PGR+VSDYRRFEQ FLRGPFDAAR+GD +TLRLLRSHGWDC+E DRRGR ALFWAAGGG ++AC+AL E GGLR + D STPLHWA GVE +RFGTGGHV+V
Sbjct: 234 RFLRHTIGAEVRTVAVSFPQFFGHPLERLIAPRHAFLVSNGRPSGDRLLETGCRGLRRMLELPVNRFVVE----MVPGREVSDYRRFEQAFLRGPFDAARKGDGETLRLLRSHGWDCWETDRRGRTALFWAAGGGSVEACKALVEGEGGLRPQDSGGDGSTPLHWAVAGVETRRFGTGGHVNV 412
BLAST of mRNA_H-paniculata_contig9150.16967.1 vs. uniprot
Match: A0A6H5KU03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU03_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.190e-35 Identity = 80/183 (43.72%), Postives = 90/183 (49.18%), Query Frame = 1
Query: 7 RFLRHTMQADESAVVVSYPHFFGHPLERHIALRHAFLEASGRPSGTRLVDDNCRGLRRMLELPVNRRGNKTKHWMAPGRDVSDYRRFEQGFLRGPFDAARRGDAQTLRLLRSHGWDCFEEDRRGRNALFWAAGGGHIKACEALTEPPGGLRADTNASDLSTPLHWAATGVEAKRFGTGGHVDV 555
RFLRHT+ + V VS+P FFGHPLER IA RHAFL A+GRPSG W WDC+E DRRGR ALFWAAGGG ++ACEAL E GGLR + D STPLHWA GVE +RFGTGGHV+V
Sbjct: 193 RFLRHTIGGEVRTVAVSFPQFFGHPLERLIAPRHAFLVANGRPSGA---------------------------W----------------------------------------WDCWETDRRGRTALFWAAGGGSVEACEALVEGEGGLRPQDSGGDGSTPLHWAVAGVETRRFGTGGHVNV 308
BLAST of mRNA_H-paniculata_contig9150.16967.1 vs. uniprot
Match: B7FSM1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSM1_PHATC) HSP 1 Score: 69.7 bits (169), Expect = 1.270e-10 Identity = 40/90 (44.44%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 289 PFDAARRGDAQTLRLLRSHGWDCFEEDRRGRNALFWAAGGGHIKACEALTEP-PGGLRADTNASDLSTPLHWAATGVEAKRFGTGGHVDV 555
P D A+ +LL HG E D RG L WAAG G++ + L P G+R T D +TPLHWAA GV A+ FGTGG V V
Sbjct: 302 PLDYINVTSAELTQLLIDHGAPPLERDHRGATLLHWAAGVGNLPGVQTLLPHFPQGVRVTTKR-DHATPLHWAAAGVNAREFGTGGSVKV 390
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 262.3 |
| Seed ortholog evalue | 1.7e-67 |
| Seed eggNOG ortholog | 2880.D8LGD8 |
| Preferred name | ANKRD16 |
| KEGG ko | ko:K20032 |
| KEGG TC | 9.B.37.1,9.B.37.3 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG0504@2759 |
| EC | 2.3.1.225 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko04131 |
| Exons | 4 |
| Model size | 555 |
| Cds size | 555 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9150.16967.1 >prot_H-paniculata_contig9150.16967.1 ID=prot_H-paniculata_contig9150.16967.1|Name=mRNA_H-paniculata_contig9150.16967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MKRFLRHTMQADESAVVVSYPHFFGHPLERHIALRHAFLEASGRPSGTRL
VDDNCRGLRRMLELPVNRRGNKTKHWMAPGRDVSDYRRFEQGFLRGPFDA
ARRGDAQTLRLLRSHGWDCFEEDRRGRNALFWAAGGGHIKACEALTEPPG
GLRADTNASDLSTPLHWAATGVEAKRFGTGGHVDV back to topmRNA from alignment at H-paniculata_contig9150:351..4512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9150.16967.1 ID=mRNA_H-paniculata_contig9150.16967.1|Name=mRNA_H-paniculata_contig9150.16967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4162bp|location=Sequence derived from alignment at H-paniculata_contig9150:351..4512- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCGTTTTCTTCGACACACTATGCAGGCCGATGAGTCGGCCGTCGT
GGTGTCGTACCCACATTTCTTCGGGCATCCTCTGGAACGACATATCGCTC
TTCGACACGCTTTCCTTGAGGCAAGCGGTCGGCCATCAGGTGCATGTATT
TGTCTGGGGGAGGGAGGGCGTCCATGTTTGCATTTTGTAGTTATCGGACC
GTTGACGACGCGTCCTCAAGAAGCATGAGCTTTGATTTTATCACGGCGAT
CTCCGATGGCTAACCGCTCTTTAATACGTTGCTACCCTTCGACTTTTCAG
GCCAACTTCTATCTCCTAGGACAGCTATCGCCTTCTTGTTGCAATCCCAG
GATTCAAAGCACTATCACACCCTTCAATTTTTCCCCATTTACTCGTGTAC
ATTCCCTCTATTTTTCTCATACAGGGGACGTTCTCTCACCACGTAATTTC
GGCCCTCAAATGCGCAACCGCAGCCACACATAAACATCGTATTGTCATCC
TCGTCAATTTTCCGGGATCGCTTCCTACATTCCTTGAGCTCAACATTTCG
GTCTTGAATTTTACTTTCAATTCTTTACATGCATCTACTGGTCCATGTAA
GTATCGATTCAACCCTATCCTTCCATCTACCCTTCGATATACTTTCAGGC
CTTCCTTACTCGCAGTCTCTCTTCTAAGTTTCTTGTTCCCCTCTGACTGC
CATTACAACCTCTTTTTCCTCCTTGAATCCACCCATGCTCTAACTCTTTA
GGATTCCTCCTTGGAGATTTCTAATTATTTCCACATTTTCTCTACTATGG
TAACCCAGTCAGTCTGTGTTTTACCTTTCTTGACTGTGTCCAATTCTGCC
TTTGTTGCGATTTTGATCGTCTCAATTTTCCCATATTCTGAACCTGGTAT
TGCCGCCTTAGCTTTCCTACGTCTCTCCCCGTTCTCAGGGCGTTTATGCC
CAGCACCGTCCTTATTGCTGTATTGCTGGTGTGTCACCTTCGCTGCCTTT
GTCTGAACTACTCCCAACTCCTTGGTTGCTTGTCTTCTGCCTATTCTCAC
AGCGGAATGATAACGCTTTTCAAAATGTTTGTTTCGATGCGTGTATCAAA
ACGCCGGTCAACAGATGTCGGGTGAAATTTTCGTATCTGGGCTTTCCCTT
CTTCGGTTACTTTCTTCTCATGTTTATCCGGCTCACAGTCCTTCGAAAAC
TCAGCGCCAAGATATGCGTACCGATCCACCCTTGGTAGTTCCTTGTCTCG
CCATTTTCACTTGAGCCATACCTCTTCTACCTTGCTGCCATTGCAGGACA
TTACGACACGCATTTTGCGTGAATATCTAGGGGGTGTAATAAAGAACAAT
TGCTCAATTGATCTATCCTTTTTTGGCGGAATCGGCAGTTCAAGCGATCG
GTTAAGTTGGGGCGACGTATCCATTACTTGCATGCCTTGACTGTTGGAAC
ATAAATAACGCTTTCTCGAGAGGACGGAACATCGAGATGGGCTTGGCTAG
GTGTGCAGGCATTGGCATCAGTGCTATGGTTATCTGTTGTGCAACTGTGC
TGCAGTGGCGAGGAGAGCTACAGAACAGTACGCATATACAGCTGGAATAG
ACATTCAAAACGCAAGTAGAATATTATGCGACAAGGTAGTGGCTGACCCA
GAATTGTTGATTAGCTCGGTAATGTCACCAGTATCCATTCTACCAACCAT
TCGAAACACAAGTATTGAATACACGTACATAACCACAGAATGCTGAGCCC
GCTTTGGTAGGCTGACCAACTGTCCCGAACCTGCGTCAAGATTTTTGTTG
TGGGAATAAAGCTCAAGTCAGCCGCATTTACTGTGTACCGTCCACCGGAT
TTGACGAGTTTTCAACTTCATTTGTTGTGGTTCTCGAGTACTTGTGTCAT
GCGTTTGTCTATGTGTATTCGATCATCTATTTTCCAGATGCAGAGGGGGA
GCCATGCGTAAATCCATACTAGTATACCCCGTACTTCATATGGCCATGCT
ATAGTGGTAATGGTCTATATATCATGAGTAACACTGAACACTGCGATAAG
GTTTTTTCTTCGGCACCAGACCGTTATGAGTCCCTTCTTTTCGACCAGCA
CTATCTTGTAGCGTCGAACTTTGGGCCACCGATCGTGGATTCCGCTGAAC
ACGACTTAGAGCCCCCGTTTCCTGTTCATTATATCGCCATGAATCTTCAC
TTCTTCTCGTTGCACGTTGAATTGTGTTTCCCTGTTGACGTAAGGCACAA
GGCTGGTGGATGACAACTGTCGAGGCCTTCGGCGGATGCTGGAACTACCT
GTCAATAGGCGAGGAAACAAAACCAAGCACTGGGTCATTAGCGGCTGTCG
CTGTCACTGCGTGCGGTCGATCTCTCTCAACGATAGTCTTGGAAATTTCG
AGTGCAAAACGTTGCTGTAAACCGTGAAGACGCCCATCTTCAGCAAATTT
CAATCGTATCGGAAGTCAAGGCAGTTTGTGTTGTCGTTTAACCATGATAT
ATAGAAACGCTAAATGGCCCGCTCGCGGCCCTCTCGCGGTGTCAGTAGGC
TTTGCTGCGCGGCTTTGTTTGCTTTTTGCGTTGTCTTGTACCTTACGTGT
GTCTTTGGTGTTTTTGTTTGTGACTTTCCAACCCGGTTACATACATGTAT
GTACGTGTGCGTGAATGCGTGCATGTGTGCGCCATGTGCCGCCATCGCCC
TTGAACAAAAAGATTTGTAGCGGAGATGGCCCCAGGGCGAGACGTATCCG
ACTACCGCCGCTTCGAGCAGGGGTTTCTGCGAGGCCCGTTCGACGCCGCC
AGGAGGGGTGACGCACAGACGCTCCGTCTTTTACGATCGCATGGGTAAGA
ATTTAAGAAAACAAAACGTTTTCCGAAACCGTCAGTAACGACACGAGTGG
TGCTTTCACAGAGTCGTACTTGTGTACAGTAGACAAATTTTCACCGCGTT
TTTTTTGTTACGGCACCATGTCTGCCGGGGCAAGTAGAGAGGAGCACAGA
GCCGGGCGGGGGAAAGGGGGTGGGTCCTGTTGCTTTTTGATGATCTGCAC
TACTTTTGTGACATGCACCTACATATCATGCTCAAGTTCCGCAGCCTGTA
CTCGCGGCCACGTATATTCATCAGCAAGCTTGAAACAAAAGGGCGTGCTG
TTTGCCCGGCTGGTTTCCTGATGGTTGCGCCAGAAGGCGCTGTCTGTGTT
GCTATACTGCTAATCTATGCGTCCTGCTCACCCCGCATGACGGTAAGGCT
CGACCAACATAGCTTGAAGAAGTTGTTTGGGGAGTATAATACATCTCTTG
AAGGCGATTATGTTTACATGTTTACATCTCTTTAGAGGGGCGACACGTGA
TTTGTCAGTATAATGGCGTAGGCCATTAATAAGGGAGTCACGGCGGGGTG
AAGGCGCTTTTACCTCTCTCATGGGGCGATGGTTTCGTCTCCAGTAAAAC
CCTCCATATTAACACGCATTCACTGAGAGTGCAAAAAATTCGTTGACAGG
CAGTTGAGGCCTGGCTATGCTGTGCTACTACTAGTGTTTCATCACCCTGC
CCTATCCGCGCAACCGACGGCCCACTACTTGCACGTCACCGTACGAATGT
ACCGTTGTATCTTTACTTCCGCGAAAACGATATGTTGGGAATGCTCATTT
TGATGGGTTTCTCATGGAGGGCAGCGCTTGCTCGTCAAAAATTAGAGGTG
ATTCGTGAGAGATCTGAGATCCTCATTCGCACACGGACATATGGACGTAG
ACTGTTTCCTTGCTGAGATCGTGTGCGTCTAACAGGGAGTCTTCGGACCT
AGATTTGTGTTTCACAAATTGGTTTACACAACAACTTAATTATATTGATA
CCATTTTCCTAGATTTCCCGCTTTATTATGGCCCACGGCAATACAACCCA
TGAGACACAACAGACGGCGCGCTGCGCTCGCAATACATTAATTTTTACAT
ATAGGTGGGATTGTTTTGAGGAGGATCGGCGAGGCCGCAACGCTCTGTTC
TGGGCTGCGGGAGGCGGACACATAAAAGCTTGCGAAGCGCTGACCGAGCC
GCCAGGCGGGTTGCGAGCTGATACCAATGCTTCGGATTTATCCACTCCGT
TACATTGGGCGGCCACTGGTGTGGAAGCGAAGCGTTTTGGCACTGGGGGA
CACGTTGACGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig9150:351..4512- >mRNA_H-paniculata_contig9150.16967.1 ID=mRNA_H-paniculata_contig9150.16967.1|Name=mRNA_H-paniculata_contig9150.16967.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at H-paniculata_contig9150:351..4512- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCGTTTTCTTCGACACACTATGCAGGCCGATGAGTCGGCCGTCGT
GGTGTCGTACCCACATTTCTTCGGGCATCCTCTGGAACGACATATCGCTC
TTCGACACGCTTTCCTTGAGGCAAGCGGTCGGCCATCAGATGAAGCGTTT
TCTTCGACACACTATGCAGGCCGATGAGTCGGCCGTCGTGGTGTCGTACC
CACATTTCTTCGGGCATCCTCTGGAACGACATATCGCTCTTCGACACGCT
TTCCTTGAGGCAAGCGGTCGGCCATCAGGCACAAGGCTGGTGGATGACAA
CTGTCGAGGCCTTCGGCGGATGCTGGAACTACCTGTCAATAGGCGAGGAA
ACAAAACCAAGCACTGGGCACAAGGCTGGTGGATGACAACTGTCGAGGCC
TTCGGCGGATGCTGGAACTACCTGTCAATAGGCGAGGAAACAAAACCAAG
CACTGGATGGCCCCAGGGCGAGACGTATCCGACTACCGCCGCTTCGAGCA
GGGGTTTCTGCGAGGCCCGTTCGACGCCGCCAGGAGGGGTGACGCACAGA
CGCTCCGTCTTTTACGATCGCATGGATGGCCCCAGGGCGAGACGTATCCG
ACTACCGCCGCTTCGAGCAGGGGTTTCTGCGAGGCCCGTTCGACGCCGCC
AGGAGGGGTGACGCACAGACGCTCCGTCTTTTACGATCGCATGGGTGGGA
TTGTTTTGAGGAGGATCGGCGAGGCCGCAACGCTCTGTTCTGGGCTGCGG
GAGGCGGACACATAAAAGCTTGCGAAGCGCTGACCGAGCCGCCAGGCGGG
TTGCGAGCTGATACCAATGCTTCGGATTTATCCACTCCGTTACATTGGGC
GGCCACTGGTGTGGAAGCGAAGCGTTTTGGCACTGGGGGACACGTTGACG
TGGTGGGATTGTTTTGAGGAGGATCGGCGAGGCCGCAACGCTCTGTTCTG
GGCTGCGGGAGGCGGACACATAAAAGCTTGCGAAGCGCTGACCGAGCCGC
CAGGCGGGTTGCGAGCTGATACCAATGCTTCGGATTTATCCACTCCGTTA
CATTGGGCGGCCACTGGTGTGGAAGCGAAGCGTTTTGGCACTGGGGGACA
CGTTGACGTG back to top
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