prot_H-paniculata_contig9138.16958.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9138.16958.1
Unique Nameprot_H-paniculata_contig9138.16958.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length469
Homology
[Close]
BLAST of mRNA_H-paniculata_contig9138.16958.1 vs. uniprot
Match: A0A6H5KNG5_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG5_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.560e-24
Identity = 86/270 (31.85%), Postives = 125/270 (46.30%), Query Frame = 0 
Query:  143 AELARHAEAWVSVLDITGERLGPGLAAESLFPTVLSALKG----------------------------IQSPELANNLIASGLWGTLSRRFGVASFLRQGLPLLLAWIDRGVSENVPWSGKAGCVKPAATGT---------------------------TTVGDEFSYTGGGGGGAMRDDGYERTQ-------GWRFDEENAAAAVGLEA-----ASRVQVAAAGAVAGEVYECLGPSLASRYLVPAMVDCLGRLAAAAAESASMIELTG 345
            AE  +H  AWVSV D++  RLGPGL  E LFP V++ L+G                            +++P+ A +L+ + +WG ++RR G  +FLR+ LPLLLAW++RGV      + +    K AA                              T   + F       G     +G  + +       G R D+      + +E      ASRVQVAA+  V+ +++ECLGP+LA+RYL+PA+VDCLGRL   AA S      +G
Sbjct: 1187 AEAVKHVGAWVSVFDLSAARLGPGLTLEVLFPPVMACLEGKMNFCRCPTTTESIQPVALGRTAAHACRVRTPQHACHLMDADIWGVVARRVGNEAFLRRALPLLLAWLERGVQTETDGTPRCRATKTAAAAVAAEQVAEEGAEDTAAPRVQEEAQRDSVTLAPERFPPPSRASGDVTTSEGSTQAKMSSRDAPGGRGDDGVCEPDMSVEGGEDFCASRVQVAASACVSQDIFECLGPTLAARYLIPALVDCLGRLVNTAAASTPHASRSG 1456
[Close]
BLAST of mRNA_H-paniculata_contig9138.16958.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.630e-15
Identity = 66/181 (36.46%), Postives = 96/181 (53.04%), Query Frame = 0 
Query:  183 IQSPELANNLIASGLWGTLSRRFGVASFLRQGLPLLLAWIDRGVSENVPWSGKAGC--VKPAAT------------GTTTVGDEFSYTGGGGGGAMRDDGYERTQ-------GWRFDEENAAAAVGLE-----AASRVQVAAAGAVAGEVYECLGPSLASRYLVPAMVDCLGRLAAAAAES 337
            ++ P+ A +L+ + +WG ++RR G  +FLR+ LPLLLAW++RGV       G  GC   + A T            G T   D         G     +G  + +       G R D+      + +E     +ASRVQVAA+  V+ +++ECLGP+LA+RYL+PA+VDCLGRL   AA S
Sbjct: 1145 VRIPQHACHLMDADIWGVVARRVGNEAFLRRALPLLLAWLERGVPTET--DGTPGCRETRTADTEAPRVREDGQRDGVTLAPDRVPPRSRASGDVTTSEGSGQAKMSSRDASGGRGDDGVGEPGMSVEGGEDLSASRVQVAASSCVSQDIFECLGPTLAARYLIPALVDCLGRLVNTAAAS 1323
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9138.16958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNG5_9PHAE1.560e-2431.85BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LHG8_ECTSI1.630e-1536.46BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..29
score: 0.537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9138contigH-paniculata_contig9138:4997..9034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9138.16958.1mRNA_H-paniculata_contig9138.16958.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9138 4997..9034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9138.16958.1 ID=prot_H-paniculata_contig9138.16958.1|Name=mRNA_H-paniculata_contig9138.16958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=469bp
VLHVPLPAFFLVMPHLIALLELPLRSAPASGHSSATAHRKRRPQRLQRRL
DINCARSLSPSSPDGVSLGAGVTAQRSGEEPSLAAAGAVPSDFERDFSAA
GDCSGDHSADRSADQWVPACSFSDASAAAYEMYSEEGVCLEWAELARHAE
AWVSVLDITGERLGPGLAAESLFPTVLSALKGIQSPELANNLIASGLWGT
LSRRFGVASFLRQGLPLLLAWIDRGVSENVPWSGKAGCVKPAATGTTTVG
DEFSYTGGGGGGAMRDDGYERTQGWRFDEENAAAAVGLEAASRVQVAAAG
AVAGEVYECLGPSLASRYLVPAMVDCLGRLAAAAAESASMIELTGPFSPM
RPPPPPPPPPPLSPADDNIPSRPSSPTTKSTTQSLDQSSSSLSSSEEHAE
AKVALGESMMESCSEQVNAGFGSSMWRRLWGWDGDRGDPASCTLLFDCWS
QKKWFGGGSDAGGEVGVSG
back to top