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Homology
BLAST of mRNA_H-paniculata_contig9138.16958.1 vs. uniprot
Match: A0A6H5KNG5_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG5_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.560e-24 Identity = 86/270 (31.85%), Postives = 125/270 (46.30%), Query Frame = 1
Query: 427 AELARHAEAWVSVLDITGERLGPGLAAESLFPTVLSALKG----------------------------IQSPELANNLIASGLWGTLSRRFGVASFLRQGLPLLLAWIDRGVSENVPWSGKAGCVKPAATGT---------------------------TTVGDEFSYTGGGGGGAMRDDGYERTQ-------GWRFDEENAAAAVGLEA-----ASRVQVAAAGAVAGEVYECLGPSLASRYLVPAMVDCLGRLAAAAAESASMIELTG 1035
AE +H AWVSV D++ RLGPGL E LFP V++ L+G +++P+ A +L+ + +WG ++RR G +FLR+ LPLLLAW++RGV + + K AA T + F G +G + + G R D+ + +E ASRVQVAA+ V+ +++ECLGP+LA+RYL+PA+VDCLGRL AA S +G
Sbjct: 1187 AEAVKHVGAWVSVFDLSAARLGPGLTLEVLFPPVMACLEGKMNFCRCPTTTESIQPVALGRTAAHACRVRTPQHACHLMDADIWGVVARRVGNEAFLRRALPLLLAWLERGVQTETDGTPRCRATKTAAAAVAAEQVAEEGAEDTAAPRVQEEAQRDSVTLAPERFPPPSRASGDVTTSEGSTQAKMSSRDAPGGRGDDGVCEPDMSVEGGEDFCASRVQVAASACVSQDIFECLGPTLAARYLIPALVDCLGRLVNTAAASTPHASRSG 1456
BLAST of mRNA_H-paniculata_contig9138.16958.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.630e-15 Identity = 66/181 (36.46%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 547 IQSPELANNLIASGLWGTLSRRFGVASFLRQGLPLLLAWIDRGVSENVPWSGKAGC--VKPAAT------------GTTTVGDEFSYTGGGGGGAMRDDGYERTQ-------GWRFDEENAAAAVGLE-----AASRVQVAAAGAVAGEVYECLGPSLASRYLVPAMVDCLGRLAAAAAES 1011
++ P+ A +L+ + +WG ++RR G +FLR+ LPLLLAW++RGV G GC + A T G T D G +G + + G R D+ + +E +ASRVQVAA+ V+ +++ECLGP+LA+RYL+PA+VDCLGRL AA S
Sbjct: 1145 VRIPQHACHLMDADIWGVVARRVGNEAFLRRALPLLLAWLERGVPTET--DGTPGCRETRTADTEAPRVREDGQRDGVTLAPDRVPPRSRASGDVTTSEGSGQAKMSSRDASGGRGDDGVGEPGMSVEGGEDLSASRVQVAASSCVSQDIFECLGPTLAARYLIPALVDCLGRLVNTAAAS 1323
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 94.4 |
| Seed ortholog evalue | 1.6e-16 |
| Seed eggNOG ortholog | 2880.D8LHG8 |
| KEGG ko | ko:K17601 |
| Hectar predicted targeting category | signal peptide |
| EggNOG free text desc. | aggrephagy |
| EggNOG OGs | KOG1786@1,KOG1786@2759 |
| Ec32 ortholog description | BEACH domain |
| Ec32 ortholog | Ec-11_004130.1 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01009 |
| Exons | 3 |
| Model size | 1409 |
| Cds size | 1407 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9138.16958.1 >prot_H-paniculata_contig9138.16958.1 ID=prot_H-paniculata_contig9138.16958.1|Name=mRNA_H-paniculata_contig9138.16958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=469bp
VLHVPLPAFFLVMPHLIALLELPLRSAPASGHSSATAHRKRRPQRLQRRL DINCARSLSPSSPDGVSLGAGVTAQRSGEEPSLAAAGAVPSDFERDFSAA GDCSGDHSADRSADQWVPACSFSDASAAAYEMYSEEGVCLEWAELARHAE AWVSVLDITGERLGPGLAAESLFPTVLSALKGIQSPELANNLIASGLWGT LSRRFGVASFLRQGLPLLLAWIDRGVSENVPWSGKAGCVKPAATGTTTVG DEFSYTGGGGGGAMRDDGYERTQGWRFDEENAAAAVGLEAASRVQVAAAG AVAGEVYECLGPSLASRYLVPAMVDCLGRLAAAAAESASMIELTGPFSPM RPPPPPPPPPPLSPADDNIPSRPSSPTTKSTTQSLDQSSSSLSSSEEHAE AKVALGESMMESCSEQVNAGFGSSMWRRLWGWDGDRGDPASCTLLFDCWS QKKWFGGGSDAGGEVGVSG back to topmRNA from alignment at H-paniculata_contig9138:4997..9034+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9138.16958.1 ID=mRNA_H-paniculata_contig9138.16958.1|Name=mRNA_H-paniculata_contig9138.16958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4038bp|location=Sequence derived from alignment at H-paniculata_contig9138:4997..9034+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GTGCTTCACGTCCCCCTACCAGCCTTTTTTCTCGTCATGCCACACCTCAT
TGCACTGCTCGAACTCCCCTTGCGGTCTGCGCCAGCGTCGGGTCATTCTT
CCGCCACTGCCCATCGTAAGCGGCGGCCGCAACGACTACAACGACGACTT
GACATCAATTGTGCCAGATCCTTGTCGCCATCATCGCCGGACGGAGTTTC
ACTTGGCGCTGGCGTCACGGCGCAAAGGAGCGGTGAGGAGCCGTCGCTTG
CTGCTGCTGGCGCAGTACCGTCGGATTTCGAGCGCGACTTTTCGGCCGCC
GGGGATTGTTCCGGAGACCATTCTGCGGATCGTTCCGCGGACCAGTGGGT
GCCGGCTTGTTCTTTTTCTGATGCCTCGGCAGCAGCGTATGAGATGTACT
CGGAAGAAGGTGTCTGTCTAGAGTGGGCAGAATTGGCGAGGCATGCGGAA
GCGTGGGTGTCGGTGTTGGACATAACGGGCGAGAGGCTTGGACCCGGGCT
GGCGGCGGAGTCTTTATTCCCGACGGTACTATCGGCGTTGAAAGGGTGAG
GTCAGGGACGTGTGCGCTGTTGTGTGTTGTTACAACAACGCGCAATACAG
CAGTGCAAATAGGTATTCAAAGCAGCGAGTGACAGTAAGCAAGAAGAGGA
AGCACGAAGAGAAAAACGATAACGTTGTAAATATGACAAGAACCATTTTT
CTTTCTTTCTTGTCATCTCTCTCTCTCTCTCTTGCTTTGTCGAAGCGGCT
GTCTGGGTAAAGGGTGGATGGGCTCGAAGCGTGTTGCTCGCCCGATCACT
TTATTTTTGGTTATTTTCTCGCCTTTCTGCGGCGGGTAGAGTGACGAATG
TTTAGATGGTTGGATGATAATCAACAGTGTGTAGGAGAAATAAGCGGTGT
AACATACAGCCGTTCACCGTAACCAACTCAACCCCCCTCCCTATTGACCG
TGCAAATTTCCCCAGGATTCAATCTCCGGAGCTCGCAAACAACTTGATCG
CCTCTGGTCTCTGGGGCACACTCTCTCGAAGGTTCGGTGTGGCCTCCTTC
CTTCGCCAGGGGCTCCCGTTGCTGTTGGCGTGGATAGACCGGGGAGTAAG
CGAAAATGTCCCCTGGTCCGGTAAAGCCGGCTGCGTAAAGCCGGCAGCCA
CCGGGACAACTACTGTAGGCGACGAGTTTAGTTACACTGGCGGTGGTGGT
GGTGGCGCGATGAGAGACGACGGTTATGAGCGTACCCAAGGTTGGCGATT
CGATGAAGAGAACGCAGCGGCCGCGGTGGGATTGGAGGCGGCTAGTCGGG
TTCAAGTTGCTGCGGCTGGCGCGGTTGCCGGGGAAGTTTATGAGTGCCTA
GGTGGGCTTTTTTTCTTGTATTTGGTGTGTGTATTTTTCTTGTTAGTTGG
AGCAAGAAACTACTATGGCGGTTGGTTCTCATGTCAGCAGCATGTGAAAA
TCTAATTGTAGCTACGTTCTCTATGTCTGTCTATATCGCCTTTCGTCGTT
GTTTGGAAAGCATATGTCCTCGTTTGTACACACCGTTTCGGAACGTGAAA
AACGCATTTGTATCCCTTATGTTCGTATTTTTCGGTTTCTCTCGTACTTT
TGTTTTTTATGGCTAGAGTGTTCGCGCGAAACGAAACCTTTTTGCAAAGT
CCAGATTGGTTTTGTGTAGAGCCACCAGAGCTTCTCGTCCCGGACCCCAG
TCCACCTATACCGAGGTCTCGTTGCAAAATGAATTCCTTGTCACAACGAG
TATTTGGATCTCATAATGAAATCTACGGATTAATTACAAAATCGCCATGA
GATGTTGATGCAGGGGAGCTGGGGATCCCGAGGGGGTCTGCAACGAGTAG
CTGACTGTTGGCTATATTCGACTAAACCGAAACTTGCAAAAAGGATTCAC
TTGACGCGAACACTGCTATTTGGAGAATATTGTTGTAATGCACTTTCGTC
GCTTAAGATGAATGTCGACACCGCATGTATCTATGTATCTATGTATCTAT
GTATCTATGTATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGT
ATCCATATGCCTGTGAAGTGTGGAGGAACATGTAGGAATCAAATGTAAAC
TTAGGCGTGAACTAGGCAATAAAAACGCGCCGCCGACAAAAAAAGTATGA
GTGCGGCACATCACTGGACGATTCTGATTCCATCAGCATCGTGACATATT
TCCCTGATTCGCATGCACTTTTTTTTTTCCTTGGGAAACTACTCCCTAAT
CCCGCTACACAACACGTACAGAGCCGTTTTGAAAGCAGTGATTTTTTCGC
CAAGACATGGTCTTGTGGAGACTTTGTGTGCGGGTTCAGCGCGAGCACGT
GCGCCGGTGAAAAGGCAGCAGTGGCAGAGTCTCATTTTGTCTCATTGGCT
TTACGTTTGCATTTCCCACTAACTCAACTCCCGAATGCCATGAACGCAGG
TGCAAGTAGATGGGTTGACCTTAGTATACAGACCAAATTGACTTTGGTAC
GATAAGTTTAGGAGAAGTCAGGAGATATACAAAACTAAACGCAATTTTTC
GTTCCAAATAATGTCCCAAGTTTCGCCGAATCTTGATACTAGTACGTGTT
GCGGTAGTGCGTGCTGCTAAGGAGAATGGCGAATGGCTATGCAGGCTAGA
ATAGCAGGGGTGGCAAATTCGACTACCGTAGGGCACTGTTCGAATGTCAT
GGGGGGGCGAGTGTCTTTTTTCAGGCCCGATTTTCTCGAAAACGAGGTCC
CATGCGCGTTAGAGAGAAGACCTTGATCTAATGACAGGTAGATCCCGAAG
AAAGCTTTCATCCCCCAGACAAATACGAACGGAGCATTCGCACCTATCTC
AAACTATCGTTGTCTTGGGTAAACACGTATATATTCGTTTACAAGTCTAT
GAATAGTCACTCTGCAGATGGTCACCAGATGGTCGTATACCCGGCGAACA
GTCACACATGTAGGTCCTGTATATTTTCCGGATGGTAGTATACAGACTGA
ATTCTCTACCTGCCCCAGCTTTTCGATGCTCCATGGCATATCGAGTACAC
TGCATATTATTCCCGTCACATGAACATGTTCCCCAATTCGACCAAATACA
GTATTCATTCCAGACTTCTCGTATTTGTTCGTGTCCTGTATTCATATTTG
TCCGGGGTGAAGTCATTTCAATGACACGACTTTCGGTCTCACTAGCCTGT
AATCTCGTATAGAAAAAATATATCCCCCCGGGTCGTCTCACAGTGGTAAT
GGCGTCCCTTAACCTTCCAAAACGAGAACAGTACTGGTTCTCTGGTTTCG
CGACGTTACGTGTTGCAACTTTCTTGCTCAAGCCTTGTCGTCGTTGTTAC
TGTTGTTGTTGTTGTCACACACAGGAAGAGCTCTCTGGCACTTCCGTGGA
TATTTTTTCAGCTTTTTCATGCCTGGACTTGCCGATCTTCTGCATTCCAC
CTCCTCGATGTTCATTCTAATAGTGAATACCACAGCCGTTGTGCAACCGT
CATCATCGTTAACAAAAAAGCGCAGTATCTACCCTGCGCGTGACCAAAAA
AAAACCCTCCAGGTCCTTCGTTAGCTTCGCGGTACCTCGTGCCAGCGATG
GTGGATTGTCTTGGACGACTGGCTGCCGCGGCAGCAGAATCAGCATCGAT
GATCGAACTTACGGGGCCGTTCTCTCCCATGCGGCCCCCGCCGCCTCCAC
CGCCGCCTCCGCCACTTTCCCCTGCCGATGACAATATCCCCTCACGCCCA
TCATCTCCAACAACCAAAAGCACGACCCAAAGCCTGGACCAATCATCGTC
ATCATTATCATCATCCGAGGAACACGCGGAGGCCAAGGTGGCGCTGGGTG
AATCGATGATGGAGTCGTGTTCAGAGCAGGTCAATGCGGGCTTTGGCTCG
TCGATGTGGAGGCGTCTGTGGGGATGGGACGGAGATCGAGGTGACCCTGC
TAGCTGTACCCTTTTGTTCGACTGCTGGAGTCAGAAGAAGTGGTTTGGCG
GCGGCAGCGATGCCGGGGGGGAGGTGGGAGTCAGTGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig9138:4997..9034+ >mRNA_H-paniculata_contig9138.16958.1 ID=mRNA_H-paniculata_contig9138.16958.1|Name=mRNA_H-paniculata_contig9138.16958.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2814bp|location=Sequence derived from alignment at H-paniculata_contig9138:4997..9034+ (Halopteris paniculata Hal_grac_a_UBK monoicous) GTGCTTCACGTCCCCCTACCAGCCTTTTTTCTCGTCATGCCACACCTCAT TGCACTGCTCGAACTCCCCTTGCGGTCTGCGCCAGCGTCGGGTCATTCTT CCGCCACTGCCCATCGTAAGCGGCGGCCGCAACGACTACAACGACGACTT GACATCAATTGTGCCAGATCCTTGTCGCCATCATCGCCGGACGGAGTTTC ACTTGGCGCTGGCGTCACGGCGCAAAGGAGCGGTGAGGAGCCGTCGCTTG CTGCTGCTGGCGCAGTACCGTCGGATTTCGAGCGCGACTTTTCGGCCGCC GGGGATTGTTCCGGAGACCATTCTGCGGATCGTTCCGCGGACCAGTGGGT GCCGGCTTGTTCTTTTTCTGATGCCTCGGCAGCAGCGTATGAGATGTACT CGGAAGAAGGTGTCTGTCTAGAGTGGGCAGAATTGGCGAGGCATGCGGAA GCGTGGGTGTCGGTGTTGGACATAACGGGCGAGAGGCTTGGACCCGGGCT GGCGGCGGAGTCTTTATTCCCGACGGTACTATCGGCGTTGAAAGGGTGCT TCACGTCCCCCTACCAGCCTTTTTTCTCGTCATGCCACACCTCATTGCAC TGCTCGAACTCCCCTTGCGGTCTGCGCCAGCGTCGGGTCATTCTTCCGCC ACTGCCCATCGTAAGCGGCGGCCGCAACGACTACAACGACGACTTGACAT CAATTGTGCCAGATCCTTGTCGCCATCATCGCCGGACGGAGTTTCACTTG GCGCTGGCGTCACGGCGCAAAGGAGCGGTGAGGAGCCGTCGCTTGCTGCT GCTGGCGCAGTACCGTCGGATTTCGAGCGCGACTTTTCGGCCGCCGGGGA TTGTTCCGGAGACCATTCTGCGGATCGTTCCGCGGACCAGTGGGTGCCGG CTTGTTCTTTTTCTGATGCCTCGGCAGCAGCGTATGAGATGTACTCGGAA GAAGGTGTCTGTCTAGAGTGGGCAGAATTGGCGAGGCATGCGGAAGCGTG GGTGTCGGTGTTGGACATAACGGGCGAGAGGCTTGGACCCGGGCTGGCGG CGGAGTCTTTATTCCCGACGGTACTATCGGCGTTGAAAGGGATTCAATCT CCGGAGCTCGCAAACAACTTGATCGCCTCTGGTCTCTGGGGCACACTCTC TCGAAGGTTCGGTGTGGCCTCCTTCCTTCGCCAGGGGCTCCCGTTGCTGT TGGCGTGGATAGACCGGGGAGTAAGCGAAAATGTCCCCTGGTCCGGTAAA GCCGGCTGCGTAAAGCCGGCAGCCACCGGGACAACTACTGTAGGCGACGA GTTTAGTTACACTGGCGGTGGTGGTGGTGGCGCGATGAGAGACGACGGTT ATGAGCGTACCCAAGGTTGGCGATTCGATGAAGAGAACGCAGCGGCCGCG GTGGGATTGGAGGCGGCTAGTCGGGTTCAAGTTGCTGCGGCTGGCGCGGT TGCCGGGGAAGTTTATGAGTGCCTAGGATTCAATCTCCGGAGCTCGCAAA CAACTTGATCGCCTCTGGTCTCTGGGGCACACTCTCTCGAAGGTTCGGTG TGGCCTCCTTCCTTCGCCAGGGGCTCCCGTTGCTGTTGGCGTGGATAGAC CGGGGAGTAAGCGAAAATGTCCCCTGGTCCGGTAAAGCCGGCTGCGTAAA GCCGGCAGCCACCGGGACAACTACTGTAGGCGACGAGTTTAGTTACACTG GCGGTGGTGGTGGTGGCGCGATGAGAGACGACGGTTATGAGCGTACCCAA GGTTGGCGATTCGATGAAGAGAACGCAGCGGCCGCGGTGGGATTGGAGGC GGCTAGTCGGGTTCAAGTTGCTGCGGCTGGCGCGGTTGCCGGGGAAGTTT ATGAGTGCCTAGGTCCTTCGTTAGCTTCGCGGTACCTCGTGCCAGCGATG GTGGATTGTCTTGGACGACTGGCTGCCGCGGCAGCAGAATCAGCATCGAT GATCGAACTTACGGGGCCGTTCTCTCCCATGCGGCCCCCGCCGCCTCCAC CGCCGCCTCCGCCACTTTCCCCTGCCGATGACAATATCCCCTCACGCCCA TCATCTCCAACAACCAAAAGCACGACCCAAAGCCTGGACCAATCATCGTC ATCATTATCATCATCCGAGGAACACGCGGAGGCCAAGGTGGCGCTGGGTG AATCGATGATGGAGTCGTGTTCAGAGCAGGTCAATGCGGGCTTTGGCTCG TCGATGTGGAGGCGTCTGTGGGGATGGGACGGAGATCGAGGTGACCCTGC TAGCTGTACCCTTTTGTTCGACTGCTGGAGTCAGAAGAAGTGGTTTGGCG GCGGCAGCGATGCCGGGGGGGAGGTGGGAGTCAGTGGCGTCCTTCGTTAG CTTCGCGGTACCTCGTGCCAGCGATGGTGGATTGTCTTGGACGACTGGCT GCCGCGGCAGCAGAATCAGCATCGATGATCGAACTTACGGGGCCGTTCTC TCCCATGCGGCCCCCGCCGCCTCCACCGCCGCCTCCGCCACTTTCCCCTG CCGATGACAATATCCCCTCACGCCCATCATCTCCAACAACCAAAAGCACG ACCCAAAGCCTGGACCAATCATCGTCATCATTATCATCATCCGAGGAACA CGCGGAGGCCAAGGTGGCGCTGGGTGAATCGATGATGGAGTCGTGTTCAG AGCAGGTCAATGCGGGCTTTGGCTCGTCGATGTGGAGGCGTCTGTGGGGA TGGGACGGAGATCGAGGTGACCCTGCTAGCTGTACCCTTTTGTTCGACTG CTGGAGTCAGAAGAAGTGGTTTGGCGGCGGCAGCGATGCCGGGGGGGAGG TGGGAGTCAGTGGC back to top
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