prot_H-paniculata_contig9132.16957.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9132.16957.1
Unique Nameprot_H-paniculata_contig9132.16957.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length475
Homology
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: D8LSR6_ECTSI (Actin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR6_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 1.680e-55
Identity = 102/203 (50.25%), Postives = 141/203 (69.46%), Query Frame = 0
Query:    1 MKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVA----SSPARRSAAKMHWARARTG-------HGERVQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVS 192
            MKIGV+EG MK +FA YHA+L A  + ++G +PL  +LD+VTM A++T TR      SSP+  +  +  W  AR+        H     E Q+ +  +A+V FE+P  F  A+K+VRSD++FADWCL+GYK +T L ++G G+GGL  LLDA +P+ VNYGLLR+SEKFD V+HE YCFI+W+PE +PA  KAR+STHQ +V+
Sbjct:  108 MKIGVNEGEMKSVFAPYHAELQACALHELGEQPLADVLDSVTMRADRTKTRKLERPPSSPSLLARGRAAWKLARSALPSMPFAHLATADE-QKKVAASANVEFEEPKAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPSGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQGSVA 309          
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A6H5KQJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ0_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 2.380e-52
Identity = 99/202 (49.01%), Postives = 139/202 (68.81%), Query Frame = 0
Query:    1 MKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVA----SSPARRSAAKMHWARARTGHGER------VQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVS 192
            MKIGV+EG MK LFA YHA+L A  + ++G + L  +LD+VTM A++T TR      SSP+  +  +  W  AR+           + + Q+ +  + +V FE+P+ FA A+K+VRSD++FADWCL+GYK +T L ++G G+GGL  LLDA +P  VNYGLLR+SEKFD V+HE YCFI+W+PE +PA  KAR+STHQ  ++
Sbjct:  108 MKIGVNEGEMKSLFAPYHAELQACALHELGEQSLADVLDSVTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSLSSMHFAHLAIADEQKKVAASTNVEFEEPEVFARAVKDVRSDLSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQGAIA 309          
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A7S1VNY1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VNY1_9EUKA)

HSP 1 Score: 77.8 bits (190), Expect = 6.030e-12
Identity = 62/218 (28.44%), Postives = 105/218 (48.17%), Query Frame = 0
Query:    5 VHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNV--TMSANKTATR-------------------VASSPARRSAAKMHWARARTGHGERVQEG----QRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKT---TLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVSNI 194
            VH G ++++F  +H  ++A   D+I     H ++D+V  T S  KT  R                   + S+P++ + +K+      T   +RV +     Q V     +V+ +D DT   AI++VRSD N A+W ++ Y       TL + G G GG+D +L   D ++  Y L R ++K D      + F+ ++  K P   KAR+STH+  + +I
Sbjct:  126 VHSGSVREIFEPFHGSISADGPDEIS----HEIIDDVIQTTSGRKTRVRDEAAAGAISQGAASSQQAVMGSAPSKGNLSKLGTLARGTRAEDRVDKQKSSTQVVPKKLGNVNVDDIDTIQQAIRDVRSDANDANWVVLTYVAGAKPDTLTLKGVGAGGVDEMLSHLDESNTYYCLSRHTDKIDDSITVKFAFVKYIGPKTPRMLKARMSTHKGAIEDI 339          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSR6_ECTSI1.680e-5550.25Actin binding protein n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5KQJ0_9PHAE2.380e-5249.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1VNY1_9EUKA6.030e-1228.44Hypothetical protein (Fragment) n=1 Tax=Sexangular... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 334..469
e-value: 0.0023
score: 16.9
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 100..195
e-value: 2.4E-7
score: 30.6
coord: 337..465
e-value: 1.7E-11
score: 44.0
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 327..469
score: 18.527
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 89..220
score: 11.384
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 1..39
score: 7.667
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 93..215
e-value: 8.2E-18
score: 66.2
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 329..469
e-value: 6.0E-23
score: 82.9
NoneNo IPR availablePANTHERPTHR10829CORTACTIN AND DREBRINcoord: 329..468
NoneNo IPR availablePANTHERPTHR10829CORTACTIN AND DREBRINcoord: 98..194
NoneNo IPR availablePANTHERPTHR10829:SF20coord: 329..468
NoneNo IPR availablePANTHERPTHR10829:SF20coord: 98..194
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 334..470
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 95..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9132contigH-paniculata_contig9132:2006..9456 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9132.16957.1mRNA_H-paniculata_contig9132.16957.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9132 1858..9609 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9132.16957.1 ID=prot_H-paniculata_contig9132.16957.1|Name=mRNA_H-paniculata_contig9132.16957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp
MKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTAT
RVASSPARRSAAKMHWARARTGHGERVQEGQRVLVGAADVSFEDPDTFAN
AIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYG
LLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVSNIAKARAS
KTTLKMRSPVRVRSTMRSPERRGMRSPLHRGARSPLAIATPAQSSTSQLP
LDVSAVAEPKDAGIAGIDLSPAVVEADVAKTSAAKVQMKGPRTFLGIDFG
MGVGMGDGGDDVAKETKQMESKEATKKMTTGMQTTLQEAVEQVKQGGSET
DFVVVGWRHGAMGDAGKGEKLEIKEMGSGGVSALAECLQAHSVLYGLLRV
KESTAGSHDKEKFCCVRWAPETVPVTPKAKVTGTSMQGEVKSLFQPYHGD
LSASAVSDLTPEAVAARVNRRLKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002108ADF-H
IPR029006ADF-H/Gelsolin-like_dom_sf