mRNA_H-paniculata_contig9132.16957.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: D8LSR6_ECTSI (Actin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR6_ECTSI) HSP 1 Score: 287 bits (735), Expect = 2.250e-88 Identity = 141/254 (55.51%), Postives = 189/254 (74.41%), Query Frame = 1
Query: 1 QALKANLVKWDVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVA----SSPARRSAAKMHWARARTG-------HGERVQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVS 729
+ALKA++V+WDVCYGLVR ++TLE+AG VQT FVKFVWVYWRP+NIPV+RKMKIGV+EG MK +FA YHA+L A + ++G +PL +LD+VTM A++T TR SSP+ + + W AR+ H E Q+ + +A+V FE+P F A+K+VRSD++FADWCL+GYK +T L ++G G+GGL LLDA +P+ VNYGLLR+SEKFD V+HE YCFI+W+PE +PA KAR+STHQ +V+
Sbjct: 57 EALKASIVEWDVCYGLVRCSYTLEQAGDVQTGFVKFVWVYWRPDNIPVIRKMKIGVNEGEMKSVFAPYHAELQACALHELGEQPLADVLDSVTMRADRTKTRKLERPPSSPSLLARGRAAWKLARSALPSMPFAHLATADE-QKKVAASANVEFEEPKAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPSGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQGSVA 309
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A6H5KQJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ0_9PHAE) HSP 1 Score: 292 bits (748), Expect = 1.680e-86 Identity = 140/253 (55.34%), Postives = 188/253 (74.31%), Query Frame = 1
Query: 1 QALKANLVKWDVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVA----SSPARRSAAKMHWARARTGHGER------VQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVS 729
+ALKA++VKWDVCYGLVR +HTLE+AG+VQT FVKFVWVYWRP+NIPV+RKMKIGV+EG MK LFA YHA+L A + ++G + L +LD+VTM A++T TR SSP+ + + W AR+ + + Q+ + + +V FE+P+ FA A+K+VRSD++FADWCL+GYK +T L ++G G+GGL LLDA +P VNYGLLR+SEKFD V+HE YCFI+W+PE +PA KAR+STHQ ++
Sbjct: 57 EALKASIVKWDVCYGLVRCSHTLEQAGYVQTGFVKFVWVYWRPDNIPVMRKMKIGVNEGEMKSLFAPYHAELQACALHELGEQSLADVLDSVTMRADRTKTRKLERSPSSPSLLARGRAAWKLARSSLSSMHFAHLAIADEQKKVAASTNVEFEEPEVFARAVKDVRSDLSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTHQGAIA 309
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A2R5G251_9STRA (Drebrin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G251_9STRA) HSP 1 Score: 145 bits (367), Expect = 3.060e-34 Identity = 86/242 (35.54%), Postives = 131/242 (54.13%), Query Frame = 1
Query: 7 LKANLVKWDVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVASSPARRSAAKMHWARARTGHGERVQEGQRVLVGAADVSFEDPDT-FANAIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVS 729
LKA L DV YGL+R +E+ G V + KF++V WRP+ IP+ RKMKIG ++G +K+LF+SYH D++ ++ D+I E +H +L +T +A++ TR S K+ W + R + +V+ GA E D A A+ VR D + WCL Y K TL G G + +L T+ V+YGL R+ E+ D + +CF+ P+ VP KA I+TH+ ++
Sbjct: 49 LKAALPSSDVAYGLLRCQFMVEKVGQVAADTTKFIFVLWRPDAIPLKRKMKIGRYDGQVKKLFSSYHTDMDINDEDEISDEIIHDMLAKITQTADRVTTRK-SITMYLGGNKVGWNKTREVVKPDSRNEFKVIKGANIKWTEGADQELAAALAEVRDDASPIRWCLATYVNKDTLTFNSKGEGDVSEMLSHTNETQVSYGLFRVQEQIDKISATRFCFVVHTPDYVPPMAKAMIATHKGAIT 289
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A6S7ZCW5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S7ZCW5_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.400e-30 Identity = 82/253 (32.41%), Postives = 129/253 (50.99%), Query Frame = 1
Query: 1 QALKANLVKWDVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVASSPARRSAAKMHWARARTGHGERVQEGQRVLVGA---------ADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEK-VPAAFKARISTHQSTVS 729
+ +KA DVCY L+R +T E+AG ++++ +F++VY RPE+IP+ RKMKIG EG +K+LF + + S +D++ + + ++ +T + NKT + A + + AR+ ++V ++ A A VSF DPD I NVR D N WCL Y K + G+G G + +L A V YGL R +E +D H + F+ W P + KA ISTH+ ++
Sbjct: 49 EGIKATCKADDVCYSLLRVNYTFEKAGVIKSDASRFIFVYLRPESIPLQRKMKIGTAEGQVKKLFTPFMKNFEISSLDELNKDKVDDMIATITQTKNKTTQKKAEAGFLIDGVHVS---ARSNATDKVNAYRKPDSQAKFTFNQSKGASVSFTDPDKLKEEIANVRDDNNPCRWCLFSYIDKKQIEFTGSGNGDVSEMLGACPDDKVAYGLFRFTEIYDKQEHVKFGFVHWSPANGLSPILKATISTHKGAIT 298
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A7S1VNY1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VNY1_9EUKA) HSP 1 Score: 92.8 bits (229), Expect = 9.180e-17 Identity = 75/272 (27.57%), Postives = 130/272 (47.79%), Query Frame = 1
Query: 4 ALKANLVKWDVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNV--TMSANKTATR-------------------VASSPARRSAAKMHWARARTGHGERVQEG----QRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKT---TLGVIGAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVSNI 735
AL+ L + + LVRTT ++ T +KF +V++ E+ + + VH G ++++F +H ++A D+I H ++D+V T S KT R + S+P++ + +K+ T +RV + Q V +V+ +D DT AI++VRSD N A+W ++ Y TL + G G GG+D +L D ++ Y L R ++K D + F+ ++ K P KAR+STH+ + +I
Sbjct: 77 ALRDALDSTKIIFALVRTTEQID-----DTTAIKFCFVHFVGESCDAKLRQRQTVHSGSVREIFEPFHGSISADGPDEIS----HEIIDDVIQTTSGRKTRVRDEAAAGAISQGAASSQQAVMGSAPSKGNLSKLGTLARGTRAEDRVDKQKSSTQVVPKKLGNVNVDDIDTIQQAIRDVRSDANDANWVVLTYVAGAKPDTLTLKGVGAGGVDEMLSHLDESNTYYCLSRHTDKIDDSITVKFAFVKYIGPKTPRMLKARMSTHKGAIEDI 339
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A0B6YA28_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YA28_9EUPU) HSP 1 Score: 90.9 bits (224), Expect = 2.480e-16 Identity = 71/240 (29.58%), Postives = 108/240 (45.00%), Query Frame = 1
Query: 31 DVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEP-LHTLLDNVTMSANKTATRVASSPARRSAAKMHWARARTGHGERVQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKG---KTTLGVIGAGRGGLDALLDATDPASVNYGLLRISEK-FDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVSNI 735
+ YGLVR F + +KFV+++W EN+PV +K + GV G ++ F+ YH + AS +D+ P LHTL+++ T ++V S + + + +R V E A+ VRSDV+ W + GYK K L +G+G GGLD L YGL R+S K D + + +I W+ V KA+ISTH+ T +
Sbjct: 62 EAMYGLVRY-----ETKFDMSTTIKFVYIHWIGENLPVGKKGRYGVIHGSIESRFSPYHLLVEASSPEDLDPSKILHTLMESA-----GTKSKVIESDQNSHRQMRGFTQTQLPQRDRKANFGVSAVSTKGAEVEILQEVFEAVSKVRSDVDPVMWMVAGYKDANPKGPLQCMGSGDGGLDELKRCLQDVLPMYGLFRVSHKDADDITTVKFVYIVWVGTSVKPMTKAKISTHKGTAEEV 291
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: V4AGL8_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AGL8_LOTGI) HSP 1 Score: 65.9 bits (159), Expect = 5.910e-8 Identity = 50/221 (22.62%), Postives = 98/221 (44.34%), Query Frame = 1
Query: 82 FVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATRVASSPARRSAAKMHWARARTGHGERVQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGYKGKTTLGVI---GAGRGGLDALLDATDPASVNYGLLRISEKFDLVYHEVYCFITWMPEKVPAAFKARISTHQSTVSNI 735
F ++ VKFV++ W + +P+ R+ K GV +G +++LF YH + + +D+ E + LD+ ++ V R+ + +G + + V + A AI+ VR+ + W L Y+ + G I G G +D L + YGL R+++ D + + +I W+ +V +A++STH+ + ++
Sbjct: 86 FDMSSTVKFVYIRWVGDKVPIARRGKYGVIKGSVEKLFDPYHILVETNTTEDLDTEKILRQLDDTAGIKSRVLENV---EGRQERGFTQTQVPQRNNGPKFGVNN---ISRGGVKIDIDPGVAEAIQAVRNQKDNIQWVLASYQDGSPKGPIIVKNKGEGTVDELRENLVEDEAMYGLYRLTDHLDDIKTVKFVYIVWLGTEVKPMTRAKVSTHRGAMEDL 300
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: A0A7S0F586_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F586_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 5.210e-6 Identity = 50/174 (28.74%), Postives = 85/174 (48.85%), Query Frame = 1
Query: 7 LKANLVKWDVCYGLVRTTHTLERAGFVQTNFVKFVWVYWRPENIPVLRKMKIGVHEGHMKQLFASYHADL-NASEIDDIGPEPLHT-LLDNVTMSANKTATRVASSPARRSAA----KMHWARARTGHGERVQEGQRVLVGAADVSFEDPDTFANAIKNVRSDVNFADWCLVGY 510
L ++L + ++ YG VRTT ++ T VKF+++ + EN+P+++K K +G + + F +HA+L NAS +D++ L + L+ N + N A+ S A + A K+ ++A G Q V + +V A+ VRSD WCL+GY
Sbjct: 4 LASHLSQDNLFYGFVRTTEAID-----STVAVKFIFLSFIGENVPMMKKAKTSTLKGTITEAFEPFHAELLNASTLDEVTVSSLRSVLMKNDGQTGNAQASGAMSQRAGQQAGASPNKVTVSKAFGGADAAAMGRQEAEVASDEVR--------QAVAAVRSDAEPCCWCLLGY 164
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Match: UPI001C7C5D98 (uncharacterized protein n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7C5D98) HSP 1 Score: 53.5 bits (127), Expect = 6.840e-5 Identity = 34/133 (25.56%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 1165 EAVEQVKQGGSETDFVVVGWRHGAMGDAGKGEKLEIKEMGSGGVSALAECLQAHSVLYGLLRVKESTAGSHDKEKFCCVRWAPETVPVTPKAKVTGTSMQGEVKSLFQPYHGDLSASAVSDLTPEAVAARVNR 1563
EA V+ S+T+++++ + ++ +KL++ ++G+GG+S L E L Y +RV+ S +EKF V W V KAK++ S +VK++ + + +++A DL + + R+ +
Sbjct: 11 EAYLDVRSDKSDTNWLLLDY------ESDGSDKLQVAQIGTGGLSELREVLDESKASYAYVRVQYSNDKESKREKFVLVVWIGPRCKVMRKAKISVHS--ADVKNVLRVFSIEVAAREKDDLNEDPIVVRLRK 135 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9132.16957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9132.16957.1 >prot_H-paniculata_contig9132.16957.1 ID=prot_H-paniculata_contig9132.16957.1|Name=mRNA_H-paniculata_contig9132.16957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=475bp MKIGVHEGHMKQLFASYHADLNASEIDDIGPEPLHTLLDNVTMSANKTATback to top mRNA from alignment at H-paniculata_contig9132:1858..9609- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig9132.16957.1 ID=mRNA_H-paniculata_contig9132.16957.1|Name=mRNA_H-paniculata_contig9132.16957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7752bp|location=Sequence derived from alignment at H-paniculata_contig9132:1858..9609- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig9132:1858..9609- >mRNA_H-paniculata_contig9132.16957.1 ID=mRNA_H-paniculata_contig9132.16957.1|Name=mRNA_H-paniculata_contig9132.16957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2850bp|location=Sequence derived from alignment at H-paniculata_contig9132:1858..9609- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |