prot_H-paniculata_contig9116.16945.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9116.16945.1
Unique Nameprot_H-paniculata_contig9116.16945.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length455
Homology
BLAST of mRNA_H-paniculata_contig9116.16945.1 vs. uniprot
Match: D8LM64_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM64_ECTSI)

HSP 1 Score: 678 bits (1749), Expect = 1.160e-233
Identity = 341/456 (74.78%), Postives = 390/456 (85.53%), Query Frame = 0
Query:    1 GAHVSYQPFDVEDYQEAADDDD-QIPSQFPPITETADDRKNWPKSCPFLHLNWGEFAISDKRRFIKISYYFWHFLTFTLLWNMMSAIVTSLISPSPKEETVFFAFVFAFLGFWWFFFGHFRLVYHAMRYRKSGLYFLYQLETAVLFFLACYMIFSAMGNLTMLLAPLAPGSAVPVRQNPEMATVLLGIAATLWMTVMLFCFYFIRKVHYFKNLPLPIEREIWVEESRPNLARSSGKKLSEMITNLFSDKLDKPYEPTKCGMLQGKDLWLQGMITLETVYVEYRADVHVFDHLVHERFHYQDVLAIRKTGPSCITFQLVHPTKRQLEDLEMEFDFSDGKVRDALYKVASKLWRRVGRNMDLLAKERSKKVTKMRKAGRAGDIADEEPDLVEAFQRARKLETRERLNDHMVTYKDWQKILEGVKLHVLKEGENLVTTGDDFTAIFHVAQGRIEVKRTM 455
            GAHVSYQPFDVEDYQ+AA D+D  IP QFPPI+ETADDRKNWPKSCPFLH+ + E AI DKR+FI ++Y FWHFL +TLL+NM +A+VTSLISPSPKE+ VFFAF+ AF+GFWWFFFGHFRL+YHAMRYRK+GLY L+QLET VLFF+A Y IFSAMGN+T LLAPLAPGSAVPVRQNP    +LLGIA+ LW  V++FCFYFIRKVHY+KNLPL IER+I+ +E    +     KK S MIT+LF +KLDK + PTKCGMLQGKDLWLQGMITLET+YVEYRADVHVFDHLVHERF YQDVLAI+ +G S ITFQLVHPTKR LEDLEMEFDFSD +VRD LYKVA+KLWRRVGRN DLL +ER+ K+ KMRK GRA DI DE PDLVEAF +AR++ETRERLNDHMVTYKDWQ+ILE VK+HVL  G+NLV TGDDFT I+HVAQG+IEV   +
Sbjct:   70 GAHVSYQPFDVEDYQDAASDEDGDIPMQFPPISETADDRKNWPKSCPFLHMKFEEMAIKDKRKFIWLAYNFWHFLVWTLLFNMCAAVVTSLISPSPKEDQVFFAFLLAFIGFWWFFFGHFRLLYHAMRYRKNGLYLLHQLETTVLFFIAVYQIFSAMGNMTQLLAPLAPGSAVPVRQNPMAGVILLGIASGLWFVVLMFCFYFIRKVHYYKNLPLSIERDIYRKEFSA-IHPEPKKKCSTMITDLFREKLDKAHPPTKCGMLQGKDLWLQGMITLETLYVEYRADVHVFDHLVHERFSYQDVLAIKTSGKSNITFQLVHPTKRHLEDLEMEFDFSDKEVRDKLYKVATKLWRRVGRNSDLLTRERADKLKKMRKVGRAADIDDENPDLVEAFNKARRMETRERLNDHMVTYKDWQRILETVKIHVLTAGQNLVDTGDDFTRIYHVAQGKIEVNEIL 524          
BLAST of mRNA_H-paniculata_contig9116.16945.1 vs. uniprot
Match: A0A835YLB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB7_9STRA)

HSP 1 Score: 224 bits (571), Expect = 5.200e-62
Identity = 113/192 (58.85%), Postives = 150/192 (78.12%), Query Frame = 0
Query:  260 MLQGKDLWLQGMITLETVYVEYRADVHVFDHLVHERFHYQDVLAIRKTGPSCITFQLVHPTKRQLEDLEMEFDFSDGKVRDALYKVASKLWRRVGRNMDLLAKERSKKVTKMRKAGRAGDIADEEPDLVEAFQRARKLETRERLNDHMVTYKDWQKILEGVKLHVLKEGENLVTTGDDFTAIFHVAQGRIEV 451
            MLQG+DLWLQG ITLE+V++E++ADV VFDHLV ER HYQ+VL IRK   + I F++V+P+++ L+D+E+ FD++D K+R A YK A KLWRRVGRNMDL+ K R +K+ KMR+     D+     D VEAF +AR+ ETRERL+ HMVTY+DWQK+L GVK+H+L+ GE L+  G+DF  ++HVAQGRIEV
Sbjct:    1 MLQGRDLWLQGQITLESVFLEFKADVTVFDHLVWERVHYQEVLEIRKYSETGILFRVVNPSRKDLDDVELIFDYNDRKLRAAQYKAARKLWRRVGRNMDLMNKLRLEKMKKMRRPVDLSDV-----DQVEAFAKARRKETRERLDAHMVTYRDWQKLLGGVKIHILQSGEALLNAGEDFNKLYHVAQGRIEV 187          
BLAST of mRNA_H-paniculata_contig9116.16945.1 vs. uniprot
Match: A0A7S2XW70_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW70_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.430e-48
Identity = 111/310 (35.81%), Postives = 175/310 (56.45%), Query Frame = 0
Query:  157 GNLTMLLAPLAPGSAVPVRQNPEMATVLLGIAATLWMTVMLFCFYFIRKVHYFKNLPLPIEREIWVEESRPNLARSSGKKLSEMITNLFSDKLDKPYEPTKCGML---------QGKDLWLQGMITLETVYVEYRADVHVFDHLVHERFHYQDVLAIRKTGPSCITFQLVHPTKRQLEDLEMEFDFSDGKVRDALYKVASKLWRRVGRNMDLLAKERSKKVTKMRKAGRAGDIADEEPDLVEAFQRARKLETRERLNDHMVTYKDWQKILEGVKLHVLKEGENLVT--TGDDFT----AIFHVAQGRIEV 451
            G L  +++PLAPGS +PV+QNP  A+ +L +   LW   M+ C + +RK +YFK++ L  E  I+ +E    +   + K   ++I   F+ K D P +P +CGML          GK +W+QG+++ +T+Y +++AD+ +FDHL+ ERF Y DV+ IRK   +C+   +    +   +  E+ FD +  KVR  L+  A KLW R+GRN D+L + R+K           G   D     V  F +AR++ET+ER  +H + YKDWQKIL GV + +L + + +     G+  T    A+ +VAQG + V
Sbjct:    3 GQLVQIISPLAPGSPLPVKQNPMYASAMLVLTMALWFMTMMACLWLVRKTYYFKHMTLNQEFLIYKKEQESPM--DTVKTWGDIIQGWFAKKEDPPLDPVRCGMLCGADKRFGGDGKGVWVQGVLSFDTIYFDFQADLTIFDHLIKERFSYYDVVEIRKFQQTCLLITVATGPEED-DKRELLFDVAYKKVRTDLFAGARKLWGRIGRNSDILVR-RAK-----------GSYEDH----VAMFYKARRMETKERFAEHFIAYKDWQKILNGVSMEILDQDQEVTVHRQGEASTFMTEAVCYVAQGSVRV 293          
BLAST of mRNA_H-paniculata_contig9116.16945.1 vs. uniprot
Match: A0A6H5KDC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDC8_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 3.180e-43
Identity = 75/99 (75.76%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 GAHVSYQPFDVEDYQEAADDDDQ-IPSQFPPITETADDRKNWPKSCPFLHLNWGEFAISDKRRFIKISYYFWHFLTFTLLWNMMSAIVTSLISPSPKEE 98
            GAHVSYQPFDVEDYQEAA DDD  IP+QFPP +ETADDRKNWPK+CPFLH+ + E AI DKRRFI ++Y+FWHFL +TLL+NM +A+VTSLISPSPKE+
Sbjct:   70 GAHVSYQPFDVEDYQEAASDDDSGIPTQFPPTSETADDRKNWPKACPFLHMKFEEMAIKDKRRFIWLAYHFWHFLVWTLLFNMCAAVVTSLISPSPKED 168          
BLAST of mRNA_H-paniculata_contig9116.16945.1 vs. uniprot
Match: A0A7S3UPK2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UPK2_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 4.300e-11
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 0
Query:  328 EMEFDFSDGKVRDALYKVASKLWRRVGRNMDLLAKERSKKVTKMRKAGRAGDIADEEPDLVEAFQRARKLETRERLNDHMVTYKDWQKILEGVKLHVLKEGENLVTTGDDFTAIFHVAQGRIEVKRT 454
            EM FD     +R + +    +L  RVGRN DL+  E  +    +++ G  G   D      E F R R+ ET  RL  H+VTY+DWQK+L      V + G+ ++  GD  + +FHVAQG + V  T
Sbjct:   16 EMVFDLGSRALRTSTFAATRQLVARVGRNTDLVVFEHER----LQRGGLVGPYQDP----TEKFARTRREETVGRLGAHLVTYRDWQKLLAAAACRVYQPGDRVLQPGDTVSCLFHVAQGGVRVLDT 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9116.16945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LM64_ECTSI1.160e-23374.78Cyclic nucleotide-binding domain-containing protei... [more]
A0A835YLB7_9STRA5.200e-6258.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2XW70_9STRA1.430e-4835.81Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A6H5KDC8_9PHAE3.180e-4375.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UPK2_HETAK4.300e-1136.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007273SCAMPPFAMPF04144SCAMPcoord: 38..210
e-value: 1.3E-25
score: 90.7
IPR007273SCAMPPANTHERPTHR10687SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMPcoord: 36..210
NoneNo IPR availablePANTHERPTHR10687:SF2SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEINcoord: 36..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 180..203
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 204..455
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..134
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 161..179
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 180..202
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 415..455
score: 7.557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9116contigH-paniculata_contig9116:2255..9140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9116.16945.1mRNA_H-paniculata_contig9116.16945.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9116 2255..9140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9116.16945.1 ID=prot_H-paniculata_contig9116.16945.1|Name=mRNA_H-paniculata_contig9116.16945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=455bp
GAHVSYQPFDVEDYQEAADDDDQIPSQFPPITETADDRKNWPKSCPFLHL
NWGEFAISDKRRFIKISYYFWHFLTFTLLWNMMSAIVTSLISPSPKEETV
FFAFVFAFLGFWWFFFGHFRLVYHAMRYRKSGLYFLYQLETAVLFFLACY
MIFSAMGNLTMLLAPLAPGSAVPVRQNPEMATVLLGIAATLWMTVMLFCF
YFIRKVHYFKNLPLPIEREIWVEESRPNLARSSGKKLSEMITNLFSDKLD
KPYEPTKCGMLQGKDLWLQGMITLETVYVEYRADVHVFDHLVHERFHYQD
VLAIRKTGPSCITFQLVHPTKRQLEDLEMEFDFSDGKVRDALYKVASKLW
RRVGRNMDLLAKERSKKVTKMRKAGRAGDIADEEPDLVEAFQRARKLETR
ERLNDHMVTYKDWQKILEGVKLHVLKEGENLVTTGDDFTAIFHVAQGRIE
VKRTM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007273SCAMP
IPR000595cNMP-bd_dom