mRNA_H-paniculata_contig1270.1693.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: D7FR67_ECTSI (Ubiquitin family protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR67_ECTSI) HSP 1 Score: 465 bits (1197), Expect = 5.190e-152 Identity = 362/611 (59.25%), Postives = 404/611 (66.12%), Query Frame = 2 Query: 623 MSEVPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQARNPP--PAXXXXXXXXXXXX--NPFG--MPGXXXXXXXXXXXXPNPFADMMGGMGGG-MDINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASDDMVNNNNANXX-RSAAQATGSGVNPSGGPNTAALPNPWAPAGTAAPTAG---NAPVAAPATGGTAGANASNPWAGLGGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRSQLPQMVRQMADPENMQAIAQMQAAMQQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSVLLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLGGGV 2422 M EV VNVRCSNGEKFTT+VD +TVLA K+KI+++AGV P+LQRLIYKGRV+KED TLASYTVEA+STVHLVRSQAR P PA NPFG PG XXX NPFA+MMG MGGG MDINRMQQQLMSNPEMM++IMN XXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXX A MRQYL+MARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLY +VQEP+MQAS+ MV N+NA + PS GPNT+ALPNPWA AG NAP P NPWA L G+GA AG G PG QMDPAMM ++MNNP+VQQM+SQMADDPA++E+M+AQNP LQQA+QANP +R QLPQ +R+MADP+N+QA+AQMQ M+QLQRAG++PPG MP NFG N+GG + P AAGGLDFS LLG XXXXXXXXXX P A+PEE Y+AQL QMNDMGFTDRAACVRALVASQGNVN AVERMLGGGV Sbjct: 1 MPEVSVNVRCSNGEKFTTEVDTEATVLAFKQKISEKAGVAPELQRLIYKGRVMKEDQDTLASYTVEADSTVHLVRSQARAAPSMPAAGGAAGTNPSPSATNPFGGTPPGGAXXXGA------NPFAEMMGSMGGGGMDINRMQQQLMSNPEMMANIMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATMRQYLDMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYTEVQEPMMQASEGMVGNDNAGTAGANXXXXXXXXXXPSAGPNTSALPNPWAAAGXXXXXXXXXTNAPAQTPGA---------NPWAALR-QGMGA-AGGGMPGMPGGG----------QMDPAMMQQMMNNPMVQQMVSQMADDPAIMETMIAQNPQLQQALQANPALRGQLPQFMRRMADPQNVQALAQMQQWMEQLQRAGVLPPGMMPGPPGAGGGGADFGPGLAGLS---------------NFGTFNLGGGTPP--AAGGLDFSTLLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP---VANPEETYAAQLTQMNDMGFTDRAACVRALVASQGNVNMAVERMLGGGV 564
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A835Z7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M7_9STRA) HSP 1 Score: 274 bits (701), Expect = 2.130e-79 Identity = 279/611 (45.66%), Postives = 340/611 (55.65%), Query Frame = 2 Query: 623 MSEVPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRS-----QARNPPPAXXXXXXXXXXXXNPFGMPGXXXXXXXXXXXXPNPFADMMGGMGGGMDINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASDDMVNNNNANXXRSAAQATGSGVNPSGGPNTAALPNPWAPAGTAAPTAGNAPVAAPATGGTAGAN--ASNPWAGL-GGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRSQLPQMVRQMADPENMQAIAQMQAAMQQLQRAGIIPP-GGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSN---AAGGLDFSVLLGGLG-GAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLGG 2416 MS V V++RCSN +KFT +D + TV A K IA+QA V + QRLIYKGRVLK+D QTLASY V+ ++T+HLVR +A P XXXXXXXXXXXX XXXXXXXXXXXX M G MGGG DI+RMQQQL+SNPEMM++IMNSP R+++ XXXXXXXXXXXXXXXX A++RQ LEM RNP AM +A RSQD MS +E P GFNALRR+Y ++QEP+M+A + XX G A+PNPWA AP AAP G AG +NPW+ L GGAG AG PG DPA + +M NP+ Q M+ QM +PA++E M+ NP L+ + A P MR QLPQ++ M+DP N+QA+ QMQ +M QLQRAGI+PP GM XXXX +TP AAGGLDFS LL G G G PG+ A A PP A Q P P A+P E Y+AQL Q+ MGF+D AA +RALV ++GNVNAAVER++GG Sbjct: 1 MSSV-VHIRCSNAQKFTVPLDTSVTVGAFKATIAEQAQVPAESQRLIYKGRVLKDD-QTLASYDVQPDTTIHLVRGARPAGEAAAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGMMQGMMGGGADISRMQQQLLSNPEMMANIMNSPMMQGLLNDPETLRSMVTGXXXXXXXXXXXXXXXXVFNDPAVIRQSLEMMRNPAAMREAMRSQDRAMSNLETHPEGFNALRRMYTEMQEPMMEAMSNPEQQXXXXXXXXXXXXXXXGT---------AMPNPWA-----------APGAAPQAAGAAGXXXAGANPWSSLMGGAGGPPPAGMAPPGMA--------------QDPAAVLNMMQNPMAQDMIRQMTSNPAVVEQMLNMNPQLRAMVDAQPGMRQQLPQLLSGMSDPANLQAMIQMQQSMAQLQRAGIMPPIPGMXXXXXAPAA-------------------------------------ATPXXXXXAAGGLDFSALLAGHGVGMPPGSGA----AVPPAWLA---------------AAQPPPP--PANPAEAYAAQLAQLRAMGFSDDAASLRALVDARGNVNAAVERLIGG 517
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A2K1KMH3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KMH3_PHYPA) HSP 1 Score: 188 bits (478), Expect = 9.990e-48 Identity = 225/642 (35.05%), Postives = 288/642 (44.86%), Query Frame = 2 Query: 626 SEVPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQARNPPPAXXXXXXXXXXXXNP----------------FGMPGXXXXXXXXXXXXPNPFADMMGGMGGGMDINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQAS-------DDMVNNN-------NANXXRSAAQATGSGVNPSGG--PNTAALPNPWAPAGTAA-PTAGNAPVAAPATGGTAGANASNP-WAGLGGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRSQL--PQMVRQMADPENMQAIAQMQAAMQQL-------QRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSVLL---GGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 S V+VRCSNG KF +VDL +TVL LK + D++ + D QRLIYKGRVLK++ QTL SY +++ TVHLVR + PA XXXXXXXXX G PG PF GMG + ++QQQLM NP +M +MN P XXXXXXXX X ++ XXXXXXXXX +RQ L+ ARNPE M + R+ D MS IE P GFN LRR+Y VQEPL+ A+ +DM +N N N R A G+ N +G PNTA LPNPW P +A P AG P+ A A P AGLG +G G G +DPAMM +++ NP +QQMM + + + M+ P L+ + NP R + P +RQ + PE++Q + Q+Q AM L Q AG P G +G GG++ VLL GGLG P P VP PE+ Y++QL Q+ +MGF D +RAL A GNV+AAVER+LG Sbjct: 22 SNAVVHVRCSNGNKFVVEVDLGATVLTLKGFLVDKSAIPADQQRLIYKGRVLKDE-QTLNSYGLQSEHTVHLVRGAPPSSTPAGANXXXXXXXXXXXXXXXXXXXXXXXXXXGLGFPGLGLGSSGGASP---PF-----GMGPS-EFQQVQQQLMQNPNLMREMMNMPAVXXXXXXXXXXXTLIMSNPQMXXXXXXXXXLAHILNDPGTLRQTLDAARNPELMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPLLNAATMGGEGANDMASNPFAAMMGVNGNPPRPAQAQGGANTNAAGTTLPNTAPLPNPWNPTHSAVLPAAGTGAGQTPSAVPGADAGGVLPDLAGLGLPDLGMMGGAG-----------------GLLDPAMMQQMLQNPQIQQMMQGLLSNXXYMNQMLNLQPQLRNMLNQNPQFRDMMQNPDFIRQXSSPESLQQMMQLQQAMMGLRGRQTPGQNAGQTPAG--------------------------------------------LGELGXXXXXXGGMNMDVLLNMFGGLGNTVPSN------------------------------PDVP-------PEQLYASQLSQLQEMGFYDTQENIRALSAVGGNVHAAVERLLG 555
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A3B5XZQ6_WHEAT (DSK2a n=25 Tax=Pooideae TaxID=147368 RepID=A0A3B5XZQ6_WHEAT) HSP 1 Score: 180 bits (456), Expect = 1.100e-44 Identity = 214/626 (34.19%), Postives = 281/626 (44.89%), Query Frame = 2 Query: 638 VNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQAR---NPPPAXXXXXXXXXXXXNPFGMPGXXXXXXXXXXXXPNPFADMMGGMGGGMDINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASDDMVNNNNANXXRSAAQATGS-GVNPSGG------------------PNTAALPNPWAP-AGTAAPTAGNAPVA---APATGGTAGANASNPWAGLGGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRS--QLPQMVRQMADPENMQAIAQMQAAMQ------QLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSVLLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 +N+RC+NG KFT Q DL TV A K +A V QRLIYKGR+LK++ QTL SY VE + T+HLVR A+ + PA P G G A + G G ++++MQQQL NP +M IMN P L N++ XXXXX +++RQ LE ARNPE M + R+ D MS IE P GFN LRR+Y VQEP + A+ A G+ G N +G PNT LPNPW+ AG A T + P A A ATGG G +++ + LGG G AX XXXXXXXXXXXXXXX D A++S+++ NP + QMM + DP + +++ NP + M++N +R Q P+ +RQMA PE +Q + +Q M Q +AG N+GG T + GLD L+G L G G P AS VP PEE Y+ QL Q+ +MGF D A +RAL+A+ GNV+AAVER+LG Sbjct: 23 LNIRCANGAKFTLQADLGETVGAFKEAVAASCDVPAPQQRLIYKGRILKDE-QTLESYGVETDHTIHLVRGVAQPAASGAPAASSPQASTTPTSGPAGGLGGLFPGLGATGAASGRPAGLFGA--GLPELDQMQQQLSQNPNLMREIMNMPMMQSLMNNPDLIXNMIMNNPQXXXXXDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMSNIEASPEGFNMLRRMYETVQEPFLNATTMGGGGEGTPASNPFAALLGNQGPNQAGXXXXXXXXTGPESTTGTPVPNTNPLPNPWSNNAGGAQGTPRSGPAASTRAGATGGPGGLGSADLSSLLGGLGGNAXXXXXXX-XXXXXXXXXXXXXXXPPDAALLSQMLQNPAMMQMMQNIMSDPQSMNQLLSMNPNARSLMESNTQLRDMFQNPEFLRQMASPEALQQLLSLQQTMSSQLGQNQPSQAG------------------------------------------------NLGGNGTGTRGNVGLD--TLMGMLSGLGAGGGLGVPNAS-----------------------NVP-------PEELYATQLGQLQEMGFFDTAENIRALMATSGNVHAAVERLLG 564
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A1S4A5X4_TOBAC (ubiquitin domain-containing protein DSK2b-like isoform X1 n=13 Tax=Nicotiana TaxID=4085 RepID=A0A1S4A5X4_TOBAC) HSP 1 Score: 179 bits (453), Expect = 1.990e-44 Identity = 207/630 (32.86%), Postives = 274/630 (43.49%), Query Frame = 2 Query: 632 VPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQARNPPPAXXXXXXXXXXXXNPFGMPGXXXXXXXXXXXXPNPFADMMG-------GMGGGM------DINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASD---DMVNNNNANXXRSAAQATGSG-----------------VNPSGGPNTAALPNPWAPAGTAAPTAGNAPVAAPATGGTAGANASNPWAGLGGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRS--QLPQMVRQMADPENMQAIAQMQAAMQQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSV-LLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 V +NVRCSNG KF+ QV L+STV + K ++ + + + QRLIYKGR+LK+D QTL SY +EA+ TVHLVR A PA +PG PFA + G G GGG D ++QQQL NP+MM +MN P XXX X XXXXXXXXXXXXXXXX + +RQ +E ARNPE M + R+ D MS IE+ P GFN LRR+Y +VQEP + A+ D N++ AN + A G G NP PNT LPNPWA AGT G A A A + P GLG D + ++++M NP + QMM + +P + + NP L+ + +NP +R Q P+ +RQ+ PE MQ + +Q + L + G N G GR+ N G++ + + GGLG TG VP PEE Y+ QL Q+ +MGF D +RAL+A+ GNV+AAVER+LG Sbjct: 27 VTINVRCSNGSKFSVQVSLDSTVGSFKSVLSQPSDIPAEQQRLIYKGRILKDD-QTLTSYGLEADHTVHLVRGFA----PAASASATNAGNPNTNQNIPGDAPPNVG------GPFAGVGGAPLFPGLGSGGGPFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLVQNLMNXXXXXXXXXXXXXXXXXXXXXXXXXXHILNDPSTLRQTMEAARNPEIMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDTRNDSGANPFAALLGAQGGGQGRNQATSPPVTGSETTANPPA-PNTNPLPNPWASAGT-----GAAQTNTTARSNAAADTRAPPLGGLG------------------ALPDLQQMLGGMPDASSLNQLMQNPAISQMMQSLLSNPQYMNQISGLNPQLRSMLDSNPHLREXMQXPEFIRQLTSPETMQQVMTLQQGL--LSQLG---------------------------------------RQQTNQGQGQDAGRTAFDNM--GMEMLMNMFGGLG---------------------------TGGLGVPNRSNVP-------PEELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVERLLG 544
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A444WWH8_ARAHY (Uncharacterized protein n=3 Tax=Arachis TaxID=3817 RepID=A0A444WWH8_ARAHY) HSP 1 Score: 176 bits (446), Expect = 1.500e-43 Identity = 224/639 (35.05%), Postives = 291/639 (45.54%), Query Frame = 2 Query: 620 KMSE-VPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQARNPPPAXXXXXXXXXXXXNPFGMPGXXXXXXXXXXXXPNPFADM-MGGMGGGM-------DINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASDDMVNNNNANXXRSAAQATGSGVNPSGG----------PNTAALPNPWAPAGT---------AAPTAGNAPVAAPATGGTAGANASNPWAGLGGAGI----GAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRS--QLPQMVRQMADPENMQAIAQMQAAM------QQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDF-SVLLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 K+SE V +N+RCSNG KF+ Q+ L+STV + K IA + QRLIYKGR+LK+D QTL SY +EA+ T+HLVR + XXXXXXX XXXXXXXXXXXX + F + + GMGG D+ +MQQ +SNP +M IMN+P + RN+ XXXXXXXXXXXXXXXX + +RQ LE RNPE M + R+ D MS IE P GFN LRR+Y +VQEP + A+ N N S QA NPS PNT LPNPW+ GT + P G+A AP GLGG G+ G G P DPA+M+++M NP + MM M +P L M+ N A Q+ M ++R Q P+ +R + PE +Q + Q A+ QQ + +G GG + P N GL+ S + GGLG TGS + P PE+ Y+ QL Q+ +MGF D +RAL+A+ GNV+AAVER+LG Sbjct: 14 KVSEPVSINIRCSNGSKFSVQICLDSTVGSFKEVIAGSCDIPAGQQRLIYKGRILKDD-QTLRSYGLEADHTIHLVRGFTPSNTGGGTNTSXXXXXXXXXXXXXXXXXXXXXXXXXXASLFPGLGLNGMGGNNLFGEGFPDLEQMQQPFISNPNLMREIMNTPAMQNLINNPEIVRNLXXXXXXXXXXXXXXXXXXHILNDPSTLRQTLEATRNPEIMREMMRNTDRAMSNIEASPEGFNMLRRMYENVQEPFLNATTMAGNTGGNNTPLSGTQARDQSTNPSTTSSEATAGSPLPNTNPLPNPWSSTGTGGAQNNNRRSTPAGGDARPQAPT--------------GLGGLGLPDLQGMLGGNAMP------------------DPALMAQLMQNPAISNMMQSMLSNPQTLNQMLGAN-ADQRGMPDLNSLREVMQNPEFLRLFSSPETLQQLMSFQQALLSQLGQQQPRESG------------------------------------------------QTGGGTGPLNNLAGLELLSSMFGGLG---------------------------TGSLAVPNRSNEP-------PEQLYATQLSQLQEMGFFDTQENIRALIATSGNVHAAVERLLG 536
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: UPI000C1CCD52 (ubiquitin domain-containing protein DSK2a-like isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CCD52) HSP 1 Score: 176 bits (446), Expect = 1.990e-43 Identity = 207/634 (32.65%), Postives = 262/634 (41.32%), Query Frame = 2 Query: 620 KMSEVPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQARNPPPAXXXXXXXXXXXXNP-------------FGMPGXXXXXXXXXXXXPNPFADMMGGMGGGM-DINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASD---DMVNNNNANXXRSAAQATGSGV----------------NPSGGPNTAALPNPWAPAGTAAPTAGNAPVAAPATGGTAGANASNPWAGLGGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRSQL--PQMVRQMADPENMQAIAQMQAAM-QQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSVLLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 K EV VNVRCSNG +F+ V+L+STV + K +A + P QRLIYKGR+LK+D QTL Y +EA TVHLVR A N NP FG G N G G G+ D+ +Q QL NP MM I+N P X XXXXXXXXXXXXXXX A +RQ +E ARNPE M + R+ D MS IE+ P GFN LRRLY +VQEP + A+ + +N + A G GV S PNT LPNPWA GT T TA SNP + +G G GFP DP +S++M NP + QMM + +P + ++ NP LQ +NP R + P+ +RQ+ P MQ + Q A+ QL R G N GG + A G L +L+ GG TG + + VP PEE Y+ QL Q+ +MGF D +RAL+AS GNV+AAVER+LG Sbjct: 19 KGGEVVVNVRCSNGSEFSVHVNLDSTVESFKSILAQNCEIPPQQQRLIYKGRILKDD-QTLQRYGLEAEHTVHLVRGFATNASTNSAGATNAGNPHANPAVTADAGSNEGGAFGGSGFGASLFPRLDL--NGLGSGAGLFGAGLPDMEHVQAQLTQNPNMMRDILNMPLVQNIMNNPEXXXXXXXXXXXXXXXXXXXXXXAHVLNDPATLRQTMEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRLYENVQEPFLNATTLEGGTRTDLGSNPFAALLGAQGGGVAREQVTNTSTTGSETLTDSPAPNTNPLPNPWASTGTEGVQ----------TNSTA---QSNPSGDVRTPPLGVSGGLGFP--------DFSQLLGSMPDPNSLSQLMQNPAISQMMQSLLSNPQYINQIIGFNPELQNMFNSNPQFRDMMQNPEFIRQLFSPGMMQRLLTFQQALLSQLGRQQTSREPGQ-----------------------------------------NDGGTA---GAPGNLSLDILMNMFGGLG------------------------TGGLTASNRSNVP-------PEELYATQLSQLQEMGFIDTQENIRALIASAGNVHAAVERLLG 553
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A833QM11_9POAL (Ubiquitin domain-containing protein DSK2a-like isoform X2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QM11_9POAL) HSP 1 Score: 174 bits (442), Expect = 5.750e-43 Identity = 201/618 (32.52%), Postives = 262/618 (42.39%), Query Frame = 2 Query: 638 VNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQA--RNPPPAXXXXXXXXXXXXNPFGMPGXXXXXXXXXXXXPNPFADMMGGMGGGM-DINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQAS------DDMVN------NNNANXXRSAAQATGS---GVNP---SGGPNTAALPNPWAPAGTAAPTAGNAPVAAPATGGTAGANASNPWAGLGGAG---IGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRSQL--PQMVRQMADPENMQAIAQMQAAMQQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSVLLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 V++RCSNG KF+ Q +L++TV A K +A V + QRLIYKGR+LK++ QTL+SY VEA+ T+HLVR+ +P N P N G+ G + D++ MQQQL NP MM IMN+P X X XXXXXXXXXXXXXXXX +++RQ LE ARNPE M + R+ D MS IE+ P GFN LRR+Y VQEP + A+ D N N A QA + G NP S PNT LPNPW+ T A G T GT P GLGGAG + + G G P DP+ ++++ NP + QMM M DP ++ NP L+ + + P +RQ+ PE MQ I +Q ++Q L + G G FG L GG S P+N + VP PEE Y+ QL Q+ +MGF D +RAL+A+ GNV+AAVER+LG Sbjct: 21 VHIRCSNGNKFSVQTELDATVRAFKTTVATSCDVPAEQQRLIYKGRILKDE-QTLSSYGVEADHTIHLVRASPPMTSPNTTTTASQGAAAQAPNSGSSPAAGTGGFLFPGLGLNSQGSNNSGLFGSLPDLDMMQQQLSQNPGMMRDIMNTPAIQSLMNNPXXXXXXXXXXXXXXXXXXXXXXXXHILNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMGGDADSGANPFAALFGNQAGNRAGTNQAPNTESTGSNPASASPAPNTNPLPNPWS-TNTGAAQTGTRSTTGSETRGT-------PAGGLGGAGMPDLTSLLGGGMP------------------DPSHFNQLLQNPAMMQMMQNMMSDPXXXXXLLGFNPTLRSLLDTXXXXXDMIQNPDFIRQLMSPETMQQILSLQQSLQGLAQLGRQQSG-----------QEQNQTDSGAVPGAGLGSNANLELLRNLFGGLGAGGFSAPANQS--------------------------------------------------NVP-------PEELYATQLTQLQEMGFIDAQENIRALIATSGNVHAAVERLLG 543
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: A0A078F0B9_BRANA (BnaC03g47520D protein n=14 Tax=Brassiceae TaxID=981071 RepID=A0A078F0B9_BRANA) HSP 1 Score: 174 bits (441), Expect = 6.740e-43 Identity = 188/633 (29.70%), Postives = 261/633 (41.23%), Query Frame = 2 Query: 632 VPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQA--RNPPPAXXXXXXXXXXXXNPFGMPGXXXXXXXXXXXXP----NPFAD---MMGGMGGGM-DINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQASD-------------------------DMVNNNNANXXRSAAQATGSGVNPSGGPNTAALPNPWAPAGTAAPTAGNAPVAAPATGGTAGANASNPWAGLGGAG-IGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRS--QLPQMVRQMADPENMQAIAQMQAAMQQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSV-LLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 V VNVRCSNG KF+ L+STV A K +A + V + QRLIYKGR+LK+D QTL SY ++A+ TVH+VR A +PPP+ PG P NP M G G G+ D+ + QQQL NP M+ +MN P R+++ +++RQ LE ARNPE M + R+ D MS IE+ P GFN LRR+Y +VQEPLM A+ D +NN+ ++A TG+G+ PN LPNPW TA T NAP +G + + GLGG G +GA + G D + +++++ NP + QMM + +P + ++ NP L+ Q P +RQ + PE MQ + +Q ++ R + G +NA GLD + + G LG G+T P VP PEER++ QL Q+ +MGF DRA +RAL+A+ GNVNAAVER+LG Sbjct: 20 VAVNVRCSNGSKFSVSTSLDSTVEAFKELVAQNSEVPANQQRLIYKGRILKDD-QTLLSYGLQADHTVHMVRGSAPSSSPPPSAPATTQTT--------APGVTRGVGSNDSSIPGLGFNPLGGGNAMSGLFGAGLPDLEQAQQQLAQNPNMIRDMMNQPAIQSLMNNPEFMRSMIMSNPQMRDLVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNHLRRMYENVQEPLMNATTMPGNGGSNAASNPFAALLGNQGVTTDAASNNSTT--QNAETGTGNGI-----PNANPLPNPWG--ATAGQT--NAPGTT-----NSGGDTRSTGLGLGGLGMLGADSPLG-----------------ATPDASQLNQILQNPAMSQMMQSVLSNPQYMNQLMNLNPQLRTXXXXXXXXXXXXQNPDFLRQFSSPEMMQQMMTLQQSLFSQNR----------------------------------------NTTTQDPGQTGAAAAGAGNNA--GLDLLMNMFGSLGAGGLGSTNQ---------------------------PNVP-------PEERFATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 534
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Match: DSK2B_ARATH (Ubiquitin domain-containing protein DSK2b n=17 Tax=Brassicaceae TaxID=3700 RepID=DSK2B_ARATH) HSP 1 Score: 174 bits (440), Expect = 1.130e-42 Identity = 194/625 (31.04%), Postives = 268/625 (42.88%), Query Frame = 2 Query: 632 VPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGRVLKEDGQTLASYTVEANSTVHLVRSQARN--PPPAXXXXXXXXXXXXNPFG------MPGXXXXXXXXXXXXPNPFAD---MMGGMGGGM-DINRMQQQLMSNPEMMSSIMNSPXXXXXXXXXXLXRNIMFXXXXXXXXXXXXXXXXXXXXXXAMMRQYLEMARNPEAMNQARRSQDLMMSQIENQPGGFNALRRLYNDVQEPLMQA---SDDMVNNNNANXXRS----------AAQATGSGVNPSGG----PNTAALPNPWAPAGTAAPTAGNAPVAAPATGGTAGANASNPWAGLGGAGIGAXAGTGFPGXXXXXXXXXXXXXXXQMDPAMMSEVMNNPIVQQMMSQMADDPALLESMVAQNPALQQAMQANPTMRS--QLPQMVRQMADPENMQAIAQMQAAMQQLQRAGIIPPGGMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFGNLNIGGRSTPSNAAGGLDFSVLLGGLGGAAPGTTANNPWASPPXXXXXXXXXXTTGSASGTPAPQVPTPTVAASPEERYSAQLVQMNDMGFTDRAACVRALVASQGNVNAAVERMLG 2413 V VN+RCSNG KF+ + L+STV + K +A + V + QRLIYKGR+LK+D QTL SY ++A+ T+H+VR A + PPPA G + G NP M G G G+ D+ + QQQL NP M+ +MN+P R+++ XX X +++RQ LE ARNPE M + R+ D MS IE+ P GFN LRR+Y +VQEPLM A S + NN +N + + A+ + P+ G PN LPNPW G G V G +A +P GLG X XXXXXXXX D + +S+++ NP + QMM + +P + +++ NP L+ Q P +RQ + PE MQ + +Q ++ Q N + + G + GGLD + + G GA G SGT VP PEERY+ QL Q+ +MGF DRA +RAL+A+ GNVNAAVER+LG Sbjct: 18 VAVNIRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDD-QTLLSYGLQADHTIHMVRGSAPSSAPPPAPAASQTTAPSVTRGVGSDNSSNLGGASPGESLFPGLGFNPLGGGNAMSGLFGAGLPDLVQTQQQLAQNPNMIRDMMNTPAIQNLMNNPEFMRSMIMNNPQXXELVDRXPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQEPLMNATTMSGNAGNNTGSNPFAALLGNQGVTTQGSDASNNSSTPNAGTGTIPNANPLPNPWGATGGQTTAPGRTNV---------GGDARSP--GLGXXXXXXXXXX----XXXXXXXXADSPLGATPDASQLSQLLQNPAISQMMQSVFSNPQYMNQLMSLNPQLRXXXXXXXXXXXXXQNPDFLRQFSSPEMMQQMMTLQQSLSQ----------------------------------------------NRNTASQDAGQTGAATGNNGGLDLLMNMFGSLGA--------------------------GGLSGTNQSNVP-------PEERYATQLQQLQEMGFYDRAENIRALLATNGNVNAAVERLLG 547 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1270.1693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1270.1693.1 >prot_H-paniculata_contig1270.1693.1 ID=prot_H-paniculata_contig1270.1693.1|Name=mRNA_H-paniculata_contig1270.1693.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=601bp MSEVPVNVRCSNGEKFTTQVDLNSTVLALKRKIADQAGVVPDLQRLIYKGback to top mRNA from alignment at H-paniculata_contig1270:1298..10558- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1270.1693.1 ID=mRNA_H-paniculata_contig1270.1693.1|Name=mRNA_H-paniculata_contig1270.1693.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9261bp|location=Sequence derived from alignment at H-paniculata_contig1270:1298..10558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1270:1298..10558- >mRNA_H-paniculata_contig1270.1693.1 ID=mRNA_H-paniculata_contig1270.1693.1|Name=mRNA_H-paniculata_contig1270.1693.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3606bp|location=Sequence derived from alignment at H-paniculata_contig1270:1298..10558- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |