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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1342 |
| Cds size | 672 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig9009.16859.1 >prot_H-paniculata_contig9009.16859.1 ID=prot_H-paniculata_contig9009.16859.1|Name=mRNA_H-paniculata_contig9009.16859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MLYGEQHSDVLERFCTDLWERLEMEKRTTKGRKADAVLNEAVQAKANARQ
EGGGDNAGEGCPEKREAATTDIPPMPRYWVPPHLLTLVLWGPLAGSQSND
ELCMRMSNGPSQKASPKSTPEVGGLSRSQSLGPIRDSHTMSMLSVNGEKM
SRREVKKALAARKKTKVEEVSNFRHEQTRELLTWVKTGAQRADDVACSIS
TIARMAAGPREEKFAHADRLGEG* back to topmRNA from alignment at H-paniculata_contig9009:3217..5042- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig9009.16859.1 ID=mRNA_H-paniculata_contig9009.16859.1|Name=mRNA_H-paniculata_contig9009.16859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1826bp|location=Sequence derived from alignment at H-paniculata_contig9009:3217..5042- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGACTAATATGTCGACGTCGTCGAGCGGCACGATCATGAGGGGCGTAGGC
CTCGACATTTTTTTTTTTTTTTTTAACCCCCGGAAGGTTAGGCAAAAACC
CTTGCCGCTGCTTCCAGGGCCTCGACATTCGCTGCAATGTAGACGTGTGC
TGGGTGCTCGAGCGATCCGACAGGTATTGGGGAAGGCGTCTCACGCACAA
GAGCCTCAAATTCTACCAAAGCCCGTGCCTATGGTACGCCGGCCACGCTG
TCGTCTTGAGTTCCGAAGGATTCACGATACATGACTAGTACAAGCATGCC
GCAAAATCTTACACCGAGATTGCTGTGCCGGGCGTGCTGAAATGATTGAA
GGATGAAGCCGGCCACGCCACTCGCGATGGACTGTCTTGTCAGACTATGG
GCCGGAAAATGCTGGGAGGTGAGCATTAGAACCGTAACACCACCAGGAAT
AAAATTTGACACGCAAAATGCTGCAACGCGTGCCGCGTCAGCAACAAGGC
ATGATAGGGTAGCACAATCAGATCAGGCACGATATTGACCCGAAGAAATG
CTAAGGGTAGGATCCAGCACGGGAGTACCGTCCGCGAAAAAATGTGGTAG
CGCGTACTGCCGGGAAAAATTCCACGACCAATACTAACCGTGTTGCACAA
TAGCTGCATACCGCACGAAATTAAGCCCCTCGAGAAACGTCGATGTGACT
GCAGAGTATGGACTCGTCATCAGGTAGAAATCGATAATCCACGGCAGAAG
TCGACGGGGCAAGCGAGCAGCACAGAAGTGATGATTTTCTCCCTCGATCT
TTTGCCGATACCGTTCACGTCTTCATTCCACAGGAAGACAAACCCGAACG
ACGAGATGCTTTACGGGGAACAGCACAGCGACGTTCTTGAACGCTTCTGT
ACAGACCTGTGGGAGCGATTGGAGATGGAGAAGAGGACTACGAAAGGGAG
GAAGGCGGATGCCGTCTTGAACGAAGCCGTGCAGGCCAAGGCGAACGCAA
GACAAGAAGGCGGTGGTGACAATGCAGGAGAAGGATGTCCTGAAAAGCGA
GAAGCGGCCACAACAGACATCCCTCCCATGCCCCGGTACTGGGTTCCCCC
CCATTTGCTGACGTTAGTCCTGTGGGGCCCGCTAGCTGGGTCCCAGAGCA
ACGACGAGTTGTGCATGAGGATGTCGAACGGTCCATCGCAGAAAGCCTCA
CCGAAGTCCACACCTGAGGTAGGCGGTTTATCACGTAGCCAGTCATTGGG
CCCGATACGTGACTCCCACACTATGTCGATGCTCTCGGTAAACGGGGAGA
AGATGAGCCGGAGGGAAGTGAAGAAGGCCCTCGCCGCGCGGAAGAAGACA
AAGGTGGAAGAAGTCAGCAACTTCCGACATGAGCAAACGAGGGAGTTATT
AACCTGGGTGAAGACCGGAGCGCAGCGTGCCGACGACGTGGCCTGCAGTA
TTAGCACGATAGCTCGGATGGCCGCAGGACCAAGAGAGGAGAAGTTTGCT
CACGCAGATAGATTGGGCGAAGGATGACGGGGACAAAGAAAAAGTAGCGC
AACTTCGAGCAGAGTCCATGGCGCTAAAACTTCTGCAGATCTGCCTCCGC
AGACTCCGACGCCTCCTTCGCCTTCTGTTTCGCAACTGCCGGCAGATTCC
TCTCTAGAATGGGAATCCTCCCGTTCAATGACGAGTCCACTGCCCCCCGA
AGGTGAAGGGGGTGCAGAGAAAGTGTGTGGTTCAACGGTGGACGACACCG
AAGAAATCGGGGCTCAGTGCCGGCACTCCTCGTCTGGTCCCCACGACTTC
GTGGTCGATGTTCGCACAGTGGCAGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig9009:3217..5042- >mRNA_H-paniculata_contig9009.16859.1 ID=mRNA_H-paniculata_contig9009.16859.1|Name=mRNA_H-paniculata_contig9009.16859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig9009:3217..5042- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTTACGGGGAACAGCACAGCGACGTTCTTGAACGCTTCTGTACAGA
CCTGTGGGAGCGATTGGAGATGGAGAAGAGGACTACGAAAGGGAGGAAGG
CGGATGCCGTCTTGAACGAAGCCGTGCAGGCCAAGGCGAACGCAAGACAA
GAAGGCGGTGGTGACAATGCAGGAGAAGGATGTCCTGAAAAGCGAGAAGC
GGCCACAACAGACATCCCTCCCATGCCCCGGTACTGGGTTCCCCCCCATT
TGCTGACGTTAGTCCTGTGGGGCCCGCTAGCTGGGTCCCAGAGCAACGAC
GAGTTGTGCATGAGGATGTCGAACGGTCCATCGCAGAAAGCCTCACCGAA
GTCCACACCTGAGGTAGGCGGTTTATCACGTAGCCAGTCATTGGGCCCGA
TACGTGACTCCCACACTATGTCGATGCTCTCGGTAAACGGGGAGAAGATG
AGCCGGAGGGAAGTGAAGAAGGCCCTCGCCGCGCGGAAGAAGACAAAGGT
GGAAGAAGTCAGCAACTTCCGACATGAGCAAACGAGGGAGTTATTAACCT
GGGTGAAGACCGGAGCGCAGCGTGCCGACGACGTGGCCTGCAGTATTAGC
ACGATAGCTCGGATGGCCGCAGGACCAAGAGAGGAGAAGTTTGCTCACGC
AGATAGATTGGGCGAAGGATGAATGCTTTACGGGGAACAGCACAGCGACG
TTCTTGAACGCTTCTGTACAGACCTGTGGGAGCGATTGGAGATGGAGAAG
AGGACTACGAAAGGGAGGAAGGCGGATGCCGTCTTGAACGAAGCCGTGCA
GGCCAAGGCGAACGCAAGACAAGAAGGCGGTGGTGACAATGCAGGAGAAG
GATGTCCTGAAAAGCGAGAAGCGGCCACAACAGACATCCCTCCCATGCCC
CGGTACTGGGTTCCCCCCCATTTGCTGACGTTAGTCCTGTGGGGCCCGCT
AGCTGGGTCCCAGAGCAACGACGAGTTGTGCATGAGGATGTCGAACGGTC
CATCGCAGAAAGCCTCACCGAAGTCCACACCTGAGGTAGGCGGTTTATCA
CGTAGCCAGTCATTGGGCCCGATACGTGACTCCCACACTATGTCGATGCT
CTCGGTAAACGGGGAGAAGATGAGCCGGAGGGAAGTGAAGAAGGCCCTCG
CCGCGCGGAAGAAGACAAAGGTGGAAGAAGTCAGCAACTTCCGACATGAG
CAAACGAGGGAGTTATTAACCTGGGTGAAGACCGGAGCGCAGCGTGCCGA
CGACGTGGCCTGCAGTATTAGCACGATAGCTCGGATGGCCGCAGGACCAA
GAGAGGAGAAGTTTGCTCACGCAGATAGATTGGGCGAAGGATGA back to top
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