prot_H-paniculata_contig9.16846.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig9.16846.1
Unique Nameprot_H-paniculata_contig9.16846.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length470
Homology
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BLAST of mRNA_H-paniculata_contig9.16846.1 vs. uniprot
Match: A0A6H5KCA8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCA8_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 1.990e-135
Identity = 192/345 (55.65%), Postives = 250/345 (72.46%), Query Frame = 0 
Query:   99 RPPTNEREERWAQIPVYVKSTDLLLYSHIHKTSGTSLSLLLARIFPEQTIVPSSHMSKGVNTSELSGKPAEWWEPFQVMFSHNRPNISTEVGIPDSKNVRLLLVVRNPLLHIASIYFESVCRYGLHIK-GGVVDQEEATRARM--KNPRTNYFSFCRDPELWVGSEQFETVYRNFQSVWLSYGGAYRHPCIGPQLKENQWN----KAGDGCAAIQENGEDEAIWEKFFERSADAAIRRLEGALWVGVTERMTEAICLLFFTLRKSYHPLGKFRYKLPRPISIWKEPSIVKAERYEKADWRVFEAANDILDLRLWTAKTMLKNAGKDEREGLGD-CFEVLTGANGS 435
            R P N+ + RW++IP+Y    DL+ +SHIHKT GTSL   LA +FP   +VP+SH SKG+  + L G  +EWW+PFQ+MFSHNR N++  +GIP +K  R+L+ +RNPLLH ASI+FESVCR+G HI   G +DQE AT AR+  K   T  ++FCRDPE+WVGS+QF+ VYRNF++ WLSYG A  HPCI P  + N+W       G  C AI+ +G+D  +W  +FER+ADAAIRR+EGALWVGVTERM E++CLLF TL K    + + R K PRPI++W E +  KA  Y++ADWRVFEAAND LDLRLWTA+  LK+AG++ER  LGD CF+VL G +G+
Sbjct:   88 RAPANDVDRRWSEIPLYRPGQDLVFFSHIHKTGGTSL---LANVFPRTALVPTSHPSKGLRVNHLQGHDSEWWKPFQLMFSHNRANVTDTIGIPPTKTPRVLITIRNPLLHKASIFFESVCRFGQHISDNGTIDQEAATLARVNGKGVETEQYNFCRDPEMWVGSKQFDKVYRNFEARWLSYGAAEGHPCIRPDPEFNRWRVDDTDVGGTCKAIKASGQDADVWAAYFERTADAAIRRMEGALWVGVTERMEESLCLLFLTLGKKESEMPQHRLKTPRPITVWHEKAKEKAASYDRADWRVFEAANDFLDLRLWTARERLKSAGEEERARLGDHCFQVLAGKDGN 429
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BLAST of mRNA_H-paniculata_contig9.16846.1 vs. uniprot
Match: D8LDK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDK9_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.890e-37
Identity = 75/171 (43.86%), Postives = 111/171 (64.91%), Query Frame = 0 
Query:  270 FQSVWLSYGGAYRHPCIGPQLKENQW---NKAGD-----GCAAIQENGEDEAIWEKFFERSADAAIRRLEGALWVGVTERMTEAICLLFFTLRKSYHPLGKFRYKLPRPISIWKEPSIVKAERYEKADWRVFEAANDILDLRLWTAKTMLKNAGKDEREGLGD-CFEVLTG 431
            +++V  ++    +H C+      + W    K GD      C +++ +G+  AI E++++R A++AI+RL   LWVGVTER  EA CLLF TL K    +G +R+K PRPIS+W E ++ K  +Y++ADW+VF AANDILDLR+WTA+  LK+AG++E E LG  C  V+ G
Sbjct:  120 YEAVTYAHNEEDKHRCV----YGHAWVKPEKGGDHHDEESCNSLKASGKHNAILEEYYDRMAESAIKRLGDGLWVGVTERSDEADCLLFLTLGKGSTGMGSYRHKEPRPISVWHEAAMSKVTQYDQADWKVFNAANDILDLRIWTARERLKHAGEEELERLGKHCVNVING 286
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig9.16846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCA8_9PHAE1.990e-13555.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDK9_ECTSI4.890e-3743.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..469
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig9contigH-paniculata_contig9:7308..27701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig9.16846.1mRNA_H-paniculata_contig9.16846.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig9 7272..28749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig9.16846.1 ID=prot_H-paniculata_contig9.16846.1|Name=mRNA_H-paniculata_contig9.16846.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=470bp
MSSASETGQAIPLWRRLLLIGQSNRRVNTHTGGYFTGGVALAIVMCIAVY
LVQLGTYNGDFGSGIITDDSELIDLEMKANESRIAARKGLALHCGLGPRP
PTNEREERWAQIPVYVKSTDLLLYSHIHKTSGTSLSLLLARIFPEQTIVP
SSHMSKGVNTSELSGKPAEWWEPFQVMFSHNRPNISTEVGIPDSKNVRLL
LVVRNPLLHIASIYFESVCRYGLHIKGGVVDQEEATRARMKNPRTNYFSF
CRDPELWVGSEQFETVYRNFQSVWLSYGGAYRHPCIGPQLKENQWNKAGD
GCAAIQENGEDEAIWEKFFERSADAAIRRLEGALWVGVTERMTEAICLLF
FTLRKSYHPLGKFRYKLPRPISIWKEPSIVKAERYEKADWRVFEAANDIL
DLRLWTAKTMLKNAGKDEREGLGDCFEVLTGANGSNRDARGLKAENMERI
TSQGLSQTTAGLEAGEWGG*
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