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Homology
BLAST of mRNA_H-paniculata_contig8977.16829.1 vs. uniprot
Match: D8LQI6_ECTSI (Rab3 GTPase-activating protein, non-catalytic subunit, distant homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI6_ECTSI) HSP 1 Score: 555 bits (1431), Expect = 3.950e-173 Identity = 393/880 (44.66%), Postives = 472/880 (53.64%), Query Frame = 1
Query: 346 AERANCREHLVRWLFRPLLSDAFAMASLTQALALLGIAGKE-HAVTLVRDMSVWFLALPVDRAADITVGREAQNCPVLRWVKGMIMLTVSPTPSQNGMATSSSGGLRAEDWGRDGDSAFN------GEGGGKMSRVLDAKSGRRVSGFGALFGDDPGCDDKEGEGAGGLQMGGGKGLADAAGSGALLSTXXXXXXSNLHAETEA--MLRPMYEACAASQRLENAAMLSVVTAEALSACRERLEESSLGRVAIGGDELWVVLSRRLRICLFFDHRLHSGESAAQDRTRISVRQLEEGKASVYSLIAKDQLISAEDLRCAACASREGAEVEASSRSQREAAEAKALAVKTRSDRRGGGRXXXXRGAGLVKQKNGEIGGERK-AVALAAAPSLADAHMDEYWREVQAVATRQRELGNRKKIPSTSATFSLNLAIAGLSTTAXXXXXXXXSTEKNIAKVTDQSQVSRGKA---------------------PTLSPTSLFFMRSHAQPIVLACHRARWLVRSWASIGPAATWVL--SGDGGVNTGEWTAAAIAEKANAAEGAVRLLSLAVDHLSYLNTARPFLAGCVAYWLWEHGRVRAHVRDLLTGGSGRGGVPTRDANGTDPADALHDRQVQTAQNAASTNSIFAAAGRPAREAFLAAAEEFLHVKVLFCGGGGRPQQGAEPGGRWGGGGXSRPGVGGGEQRGTQGSFMSQLSAGAVQRCPWPGAWDMWVEECLRDAQVRPPHPGAVTAHATLLRVLRVSTICGLPGEEAPGLFLRGGDLCAEASLCNSRLATPA--------------PERGVIGEQARITAHRETYIRRALEAIVPRPAQTIYRLAQDFGIPEDSVRGWHCLVLLRRGHDVLGEEAMAQV 2844
A+ A CR L WLFRPLLSDAFA+ASLTQAL+LLG+ G A LVRD++ WFL LPV RAAD TVGREAQNCPVLRW+KG+I+ S + ++ D G DGD + SR+ D V G G + G DD +G A XXXXXX+ E +A +LRPM+EACAASQRLENA+MLSVVTAEAL+ACRE+LEESSLG+VAIGG E WV L+RRLR+CLF DHRLH G A Q R R S+R+ EEGKASVY+ +AKDQL+S DL AAC++RE EVEAS+RSQREAAE + ++ GR G +++ + GE A+AAA SLADA MDE+WR VQAVA R GN + A+ G+ +N + +Q+ RG + P PTSLFFMRSHAQPIVLACHR RWLV SWAS GP + L + D G A++E A E AVR LSLAVDHLSYL TARP LAG A G+V + D+ SFMS L+ GAVQRCPWPGAWD WVEECLRDAQV PP AV AH+TLLR LRVS +CGLP E+ GLF +G LCA++SL + LA+PA P GV GE+ + A RE+YIRRAL+A+VPRPAQ +YRLA+DFG+ ED+VRGWHCLVLLRRGHDVLGEEA++Q+
Sbjct: 785 ADYARCRTRLFGWLFRPLLSDAFALASLTQALSLLGLGGGNGQAAVLVRDLAAWFLELPVGRAADTTVGREAQNCPVLRWLKGVILAWASSSTKRS-----------TADGGEDGDDGVSFLDRETAAPPDTESRMKDLFGDPVVRGRGVIVAG--GTDDADGGEAASXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEGGEKDAEEILRPMFEACAASQRLENASMLSVVTAEALAACREKLEESSLGQVAIGGGEAWVTLARRLRLCLFLDHRLHWGVLAGQ-RDRASLRRFEEGKASVYAFVAKDQLMSFRDLSFAACSARERGEVEASARSQREAAE------EAKAXXXXXGRQLVR---GEQRRRPSALAGEDGIGHAVAAASSLADAQMDEHWRAVQAVAARA---GNSPMMA----------ALGGVVPAVAEPRAGPGGNRENKPRRDEQASSPRGHSHRKSGDGAGAAEGSVVLPGTFPESPPTSLFFMRSHAQPIVLACHRTRWLVLSWASTGPRSEEALRRAADRG---------ALSESVGATEAAVRRLSLAVDHLSYLRTARPLLAGGGA-----GGKVLSSAADV--------------------------------------------------------------------------------------------------------SFMSLLTEGAVQRCPWPGAWDRWVEECLRDAQVHPPLQAAVAAHSTLLRALRVSAVCGLPEEDTLGLFEQGRSLCADSSLSDENLASPAVSGGDRRTAVGAPPPGEGVQGER-HVVAQRESYIRRALDAVVPRPAQNVYRLARDFGVSEDTVRGWHCLVLLRRGHDVLGEEALSQI 1509
BLAST of mRNA_H-paniculata_contig8977.16829.1 vs. uniprot
Match: A0A835ZG00_9STRA (Rab3 GTPase-activating protein regulatory subunit N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG00_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.130e-32 Identity = 176/652 (26.99%), Postives = 248/652 (38.04%), Query Frame = 1
Query: 937 MLRPMYEACAASQRLENAAMLSVVTAEALSACRERLEESSLGRVAIGGDELWVVLSRRLRICLFFDHRLHSGESAAQDRTRISVRQLEEGKA--SVYSLIAKDQLISAEDLRCAACASREGAEVEASSRSQREAAEAKALAVKTRSDRRGGGRXXXXRGAGLVKQKNGEIGGERKAVALAAAPSLADAHMDEYWREVQAVATRQRELGNRKKIPSTSATFSLNLAIAGLSTTAXXXXXXXXSTEKNIAKVTDQSQVSRGKAPTLSPTSLFFMRSHAQPIVLACHRARWLVRSWASIGPAATWVLSGDGGVNTGEWTAAAIAEKANAAEGAVRLLSLAVDHLSYLNTARPFLAGCVAYWLWEHGRVRAHVRDLLTGGSGRGGVPTRDANGTDPADALHDRQVQTAQNAASTNSIFAAAGRPAREAFLAAAEEFLHVKVLFCGGGGRPQQGAEPGGRWGGGGXSRPGVGGGEQRGTQGSFMSQL----SAGAVQRCPWPGAWDMWVEECLRDAQVRPPHPGAVTAHATLLRVLRVSTICGLPGEEAPGLFLRGGDLCA--EASLCNSRLAT-PAPERGVIG---EQARITA------HRETYIRRALEAIVPRPAQTIYRLAQDFGIPEDSVRGWHCLVLLRRGHDVLGEEAMA 2838
+L+P+Y+AC AS LE A +L+VV EA +A +E SLG V + G W L+RRLR CL HRL G A + ++V+QLEEG+A S+ +++AKDQL++ +DL AAC +RE E++A+ R+AA A GG A +A P + D WR+V VA G+ G T L+F +HAQP++LACHRARWL+ SWA++ G GG + A++ L AV+HLSY+ LAG VAY LW G +R + G + R P +A+ A L Q ++I A C G G G Q ++ + S G V L P A+ AH LL+ LRV++ CG G +A + A E +L ++R+ T P G +G E AR A R ++ AL A+ A +Y LAQ G +VR H LL RG D+ E ++
Sbjct: 827 LLQPVYDACRASAALEAALLLAVVAGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHGRGA--ESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQAAHDWWRDAAAA---------------------------------GGA--AAGASALPGVTHVCADARWRDVMEVAAAHSRRGSXXXXXXXXXXXXXXXXXQGR-------------------------------------TLLWFFPAHAQPLLLACHRARWLMMSWAAMA-------RGGGGAD------------------ALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSG-LRQYA-----GAAARSAAPLLEAD----AAVLQVAISAAEQFLGHIDAIAADXXXXXXXXXXXXXXXXXRQAATECA-------------------LEAEGAAAGAWPGAQDRWLHECLFGSSGGDXXXXXXXXXXXXXVGLVL-------PRRAALEAHGVLLQALRVASTCGFAGADALRVLPAAAAERAFREGALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGERRRAFVSAALHALGGASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLS 1343
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 567.8 |
| Seed ortholog evalue | 9.7e-159 |
| Seed eggNOG ortholog | 2880.D8LQI6 |
| Preferred name | RAB3GAP2 |
| KEGG ko | ko:K19937 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0001505,GO:0001667,GO:0002064,GO:0002065,GO:0002066,GO:0003006,GO:0003674,GO:0005085,GO:0005088,GO:0005096,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006810,GO:0006836,GO:0006886,GO:0006928,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0008021,GO:0008047,GO:0008104,GO:0008150,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010604,GO:0010631,GO:0010638,GO:0010646,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016239,GO:0016241,GO:0016477,GO:0017016,GO:0017112,GO:0017137,GO:0019222,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023061,GO:0030133,GO:0030154,GO:0030234,GO:0030695,GO:0030707,GO:0030855,GO:0031267,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032940,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0040011,GO:0042175,GO:0042886,GO:0043085,GO:0043087,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043547,GO:0044087,GO:0044088,GO:0044089,GO:0044090,GO:0044093,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044456,GO:0044464,GO:0044703,GO:0045184,GO:0045202,GO:0046903,GO:0046907,GO:0046982,GO:0046983,GO:0048468,GO:0048477,GO:0048518,GO:0048522,GO:0048609,GO:0048856,GO:0048869,GO:0048870,GO:0050746,GO:0050747,GO:0050789,GO:0050790,GO:0050794,GO:0050803,GO:0050804,GO:0051020,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0060025,GO:0060255,GO:0060429,GO:0060589,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090130,GO:0090132,GO:0090150,GO:0097051,GO:0097458,GO:0097708,GO:0098772,GO:0098793,GO:0098827,GO:0098916,GO:0099177,GO:0099503,GO:0099536,GO:0099537,GO:0099643,GO:1902115,GO:1902117,GO:1903059,GO:1903061,GO:1903371,GO:1903373,GO:2000112,GO:2000785,GO:2000786 |
| EggNOG free text desc. | Rab3 gtpase-activating protein non-catalytic |
| EggNOG OGs | KOG2727@1,KOG2727@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko04131 |
| Exons | 8 |
| Model size | 2844 |
| Cds size | 2844 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig8977.16829.1 >prot_H-paniculata_contig8977.16829.1 ID=prot_H-paniculata_contig8977.16829.1|Name=mRNA_H-paniculata_contig8977.16829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=948bp
LQEFLDTVSLVLELPETPPTLETSRTAGGNKCDQTTGPLLRFIEPVAGET NQKVVAAPAASAIRSRPNTSDGKLSAHSLASSVASSANRFAQGELSIGSG GGGGGGGRAASTGIAAERANCREHLVRWLFRPLLSDAFAMASLTQALALL GIAGKEHAVTLVRDMSVWFLALPVDRAADITVGREAQNCPVLRWVKGMIM LTVSPTPSQNGMATSSSGGLRAEDWGRDGDSAFNGEGGGKMSRVLDAKSG RRVSGFGALFGDDPGCDDKEGEGAGGLQMGGGKGLADAAGSGALLSTDDD DDDSNLHAETEAMLRPMYEACAASQRLENAAMLSVVTAEALSACRERLEE SSLGRVAIGGDELWVVLSRRLRICLFFDHRLHSGESAAQDRTRISVRQLE EGKASVYSLIAKDQLISAEDLRCAACASREGAEVEASSRSQREAAEAKAL AVKTRSDRRGGGRGGGRRGAGLVKQKNGEIGGERKAVALAAAPSLADAHM DEYWREVQAVATRQRELGNRKKIPSTSATFSLNLAIAGLSTTATTATIAT KSTEKNIAKVTDQSQVSRGKAPTLSPTSLFFMRSHAQPIVLACHRARWLV RSWASIGPAATWVLSGDGGVNTGEWTAAAIAEKANAAEGAVRLLSLAVDH LSYLNTARPFLAGCVAYWLWEHGRVRAHVRDLLTGGSGRGGVPTRDANGT DPADALHDRQVQTAQNAASTNSIFAAAGRPAREAFLAAAEEFLHVKVLFC GGGGRPQQGAEPGGRWGGGGGSRPGVGGGEQRGTQGSFMSQLSAGAVQRC PWPGAWDMWVEECLRDAQVRPPHPGAVTAHATLLRVLRVSTICGLPGEEA PGLFLRGGDLCAEASLCNSRLATPAPERGVIGEQARITAHRETYIRRALE AIVPRPAQTIYRLAQDFGIPEDSVRGWHCLVLLRRGHDVLGEEAMAQV back to topmRNA from alignment at H-paniculata_contig8977:100..8553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig8977.16829.1 ID=mRNA_H-paniculata_contig8977.16829.1|Name=mRNA_H-paniculata_contig8977.16829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8454bp|location=Sequence derived from alignment at H-paniculata_contig8977:100..8553+ (Halopteris paniculata Hal_grac_a_UBK monoicous) TTACAGGAATTCCTTGACACCGTCTCGCTCGTTCTCGAACTCCCGGAAAC
GCCTCCAACACTCGAGACCTCGCGGACCGCCGGAGGAAACAAGTGCGATC
AGACCACTGGCCCCTTGTTACGTTTCATCGAACCCGTCGCCGGTGAAACT
AACCAAAAGGTGGTAGCAGCCCCCGCCGCTTCGGCTATCCGATCCCGACC
CAACACCAGCGACGGAAAATTGTCCGCGCATTCGTTGGCATCGTCCGTGG
CATCGAGCGCCAACCGCTTCGCGCAAGGAGAGTTGTCAATTGGCTCCGGT
GGCGGTGGCGGCGGCGGCGGCCGCGCTGCTTCGACAGGGATAGCCGCCGA
ACGTGCGAATTGCCGCGAGCATCTGGTCCGATGGCTATTCCGGCCGTTAC
TCTCTGATGCCTTCGCGATGGCCTCTTTAACGCAAGCATTGGCTCTCCTG
GGGATTGCGGGAAAAGAGCACGCTGTTACGCTTGTACGGGATATGTCGGT
GTGGTTTCTGGCGCTGCCGGTCGACCGCGCCGCCGATATCACCGTCGGCC
GAGAGGCGCAGAATTGCCCGGTGCTACGATGGGTCAAGGGAATGATCATG
CTTACAGTGTCACCGACGCCCTCTCAAAATGGGATGGCTACTAGCAGCAG
CGGGGGCTTGAGGGCGGAAGACTGGGGGCGTGATGGTGATTCCGCGTTTA
ATGGTGAAGGCGGTGGCAAGATGTCGAGGGTGTTGGACGCGAAGAGCGGT
CGGCGTGTCAGTGGATTTGGCGCACTGTTTGGCGATGATCCCGGGTGTGA
CGACAAGGAAGGAGAGGGTGCTGGAGGTTTGCAGATGGGAGGGGGCAAGG
GATTGGCGGACGCTGCGGGGAGCGGCGCCTTGTTATCCACCGTTAAAAAG
CGAAGCCGAAAGGAGCTAGATGAGGACGATGACGGAGAAGAAGGCGATAG
GGAGGTGAAGAATACGTTGAGATGGGAGAGTGCTTTACGTCGCCACAAAG
TTCTGCCGAGGTTTCTCACCTAACAGGCTCTGTTTGCGAGGGCGAGTGAA
TGACACACAGGATGATGTCATATCAGACGAGATCAGATCGAGATGAACTC
TGTTGGCATGCCGACATCTTGAACTTTCCCCCTCTCTGTCCACGTTTTAC
TTACTCCTACGCAGTGTCGCCGCTTTAAGTCAAAACAATGACGGTAACAA
TCTCATCAAAGCCTGACTGATGCTCTTGTTACGAATTATCGCCACCTCAC
TGCTCCCGTCTGCTTTGCGTGGTTCTTTTCCTCAGGAGGCCGCAGTAGAT
GGTTCTCAAAATAACGATGACAACAACGAGGACGATGATGACGATGACAG
CAATCTCCACGCCGAGACAGAGGCAATGCTCCGCCCCATGTATGAAGCCT
GCGCGGCCTCGCAGAGGCTCGAGAATGCCGCAATGCTGTCGGTCGTTACG
GCGGAGGCGTTGTCGGCGTGTCGGGAGAGACTCGAAGAGAGCTCTCTCGG
CCGCGTCGCCATTGGAGGAGACGAGCTATGGGTCGTTCTTTCCAGAAGGT
TAAGAATCTGCTTGTTCTTTGACCACCGTCTTCACTCGGGGGAATCGGCG
GCGCAGGACAGGTGAGAAACGTATACATTTTCATTTCCAAGGGTTGCAGG
GGATATGTCGAGGGTGGGGTGGGGTTATGCAGCTGGCTTCGCACTTGAGC
TGTGTACACTTATTACCAAAATGACATAAACGAGAGAAGGGAACAAGTGT
GGAAAATGACAATGATGAGCCAATAATGTGGGACACGATCTGAAAACGAC
GCAGTTTTCTGCCACTACTGTAGTAGTAGAGTGATGGCTCTATGCTTGTG
TAGTTTGTGCTTGTCCTAGACTCACGGACTCGCTGCGCTCGTGTGAAGAT
TCTTTCTCGGAAATTACTTGAGTACAGACTTGGAAACATGTTCCGAAATG
ATGACCACGTTTCCACTTAGCAAAGAGCCTGTATTAAAACTATGTATTCA
TGCTGAGATTGTGTAAACTGTATGTTACCTAAAAGCTGCGAATTCGATCG
TATCAGATAGTCATCAGCACCAGCAAGGAATACATTGTTTTTTTTTCTCA
ACACCGGGGTCCAGTTGCTCAGACCCGCGTCCGATGTGGACAGAATATCA
CGTAGTGTTTTATTTTTAATGGCCTTCTATTTTTCATGTGAATGTCACAG
AGTTGGCCTGCTCCTTGAATTCTTCTGTGTGACCGGGGGCGGACCACAGT
GACAATTGCGTGTACTCAAGTAGTAGGGTAGGACCGCTGTAGTTTCTTTG
GACAAATCTGCTGACCAGTCGTGCAAAGAAATTACACAATAAAAAGATGC
TAACGCCTAAGAAGCACCGGACACACTCGACCCGTCAAATATATCATTGA
TACCCCCCAGGTGGCCGGTAGCAGGTTGTTGGGGGGTGCATTGACCGAGA
AACGTTGTGCGCGGCGGTCAGGGCATGCGTTGCAGTACTCTAGCGGCTCT
TACATATCGTTTGCGTCACACTTTGTACTTGCTGTCCTTGCTTTGCCGAG
AAGGCACTAGTCTGTTTTGCCTTCATGCTCTCTATTGTTGCTGATGTCGA
CAGTTACCAATACTCTGAACGATTATATTGTTGAATACGCTGCAACTCCA
CCAACGCCGCAGCAGACACACCAAGCCGCAACAGCCAGCTAGCCAGCTAG
TCAACCCTCATCATCTCCGATCGCAACACGCCCCTTAAGTACAGTATAAA
ACACATTCCAACCTTTTATATCCCATCCGATGAACCTCCATCCCCCCCCT
CCATGCACACAAGTACCCGCTTACACTTAAAATCCCACTTGATGGATCCA
GGACGCGCATCTCGGTGCGGCAATTGGAAGAGGGCAAAGCCTCAGTCTAC
TCTCTCATCGCCAAAGACCAGCTGATTTCCGCCGAAGATCTGAGATGCGC
CGCTTGCGCGTCTCGCGAGGGTGCCGAGGTGGAGGCGTCGTCGCGCAGTC
AACGGGAGGCCGCCGAGGCTAAAGCCTTGGCGGTGAAGACGAGGTCCGAT
CGCCGTGGAGGCGGTCGCGGCGGGGGAAGGCGAGGAGCGGGTCTTGTCAA
GCAGAAAAACGGAGAGATAGGTGGTGAGAGGAAGGCAGTGGCTCTGGCAG
CAGCTCCGAGCTTGGCAGACGCGCACATGGATGAGTACTGGAGAGAGGTG
CGTTGGTGGTGGCGGTGTGGTCGCATTTCATTCGATGTGCTCAAAGCTCA
AATCGACCCGCAATGGCTCGCAGCCTTTTTTTCATTGTCCCAGCCCATGC
GACGTAGATTCGACGTAGATTCGACGTACGGTCAGCTGGCGACGTAGATT
CGACGTACGGTCAGCTGGCGACGTAGATTCGACTTCGGAAAATGCACACT
CTTGAAGTTGCGGTGTGATTGAACAAGTCATCGTGGTTTGGGTACGCTTG
TATTAGCTACGCTAGCCGATGACATCACCTTGCTCCCATGTTCGTCTCTG
CAGGTGCAAGCCGTGGCAACACGCCAGCGAGAGCTCGGAAATCGTAAAAA
AATACCGTCCACCTCAGCCACATTTTCCCTCAACTTGGCCATTGCCGGCC
TATCGACAACAGCCACCACCGCCACCATTGCCACCAAGTCTACGGAAAAG
AACATTGCCAAAGTCACGGACCAATCACAGGTCTCTAGAGGGAAAGCCCC
GACTCTAAGTCCCACGAGTCTATTTTTCATGCGCTCGCACGCGCAGCCGA
TTGTGTTGGCTTGTCACCGCGCCCGATGGCTTGTCCGCTCCTGGGCATCC
ATTGGCCCAGCGGCGACATGGGTATTGAGTGGCGATGGCGGCGTGAACAC
AGGAGAGTGGACAGCTGCGGCCATTGCCGAGAAGGCTAATGCGGCAGAGG
GCGCCGTGCGTCTTTTATCGCTTGCGGTGGACCACCTGAGCTACCTGAAT
ACTGCCAGGCCGTTTCTTGCTGGCTGCGTTGCGTATTGGCTGTGGGAGCA
TGGGAGAGTGCGGGCGCACGTGAGAGACTTGCTAACCGGAGGGAGTGGAA
GAGGAGGGGTGCCAACGTGAGTTTTTCCCCAAAAACAGAATATCCCTGAG
AAATCGAAGATGAGTATAGGATACAGAATGATATGACAGGATATGATGTA
TTTTGGTTTGGTTTAGTTTATCTACGCATTTCATTCAGCTGTATGAGGTC
AATATTAGTAGTACGATGGAGTTATTATAAGAACGTGATAGTTGGGATTA
TATGTATATGTTGTTTGAACGGTTATGGTCATGTTTCTACATCAAGTAAT
GAGAATTGATATTTTGCTATATTTGACTCGGTTTTCACTCCATGAAGACT
CTTGAGTACTTTTTCAGGCCGTATTGTCATCATCGTGCAGATGCTGTGTT
GCTGGTAAAGCTCTCTTCGGTAAGTGGTGTCGCTATGTAGTAGTTGGTGG
TAGATTTATTGCTCTTGCTTGAAGAAATGCACTCCTGGTCGTATTATCAC
TGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTTTTTTTTCTTAG
CCCCCGAAGGGCCGAGGCAAAAAACATTTACCGATGTTTCCATACTTCAG
TATTTTACCAAAGTATTTCTACATTTCCTTTAACAGAACAGAGTTATTTA
TTCCTCTGCGGGGTAGGCGCCAACCCGGTTCGGCCGAACCAAGTAGGCAG
TGTGGGGGTTGCACCCACTAAAGGCCTTTGACTTGACTTCCAGGTTTTGA
AGCACAGTGCAGTATGTAGACTTGTGTCGGTCTCGAACATGTTCTGTACA
CGAAAGATCAAATCCAAATTATTTTTTCACCTGCAACCTTCCCCCCCCGC
TCCCCCTTACTGATTTAATTTTGCTGCTAATTGTATACAACTGCAGATTG
ACCCTCTCCCCCCTCCTCGACACCGAACCCTAGCAGGGATGCGAACGGAA
CAGATCCAGCCGATGCTCTCCACGACCGTCAAGTACAAACTGCACAAAAT
GCAGCAAGCACTAACAGCATATTTGCAGCAGCAGGGAGACCCGCACGCGA
GGCCTTTCTAGCTGCCGCCGAGGAGTTTCTACACGTGAAGGTCTTGTTCT
GCGGCGGGGGTGGCCGCCCGCAGCAGGGCGCGGAGCCAGGCGGTCGATGG
GGCGGCGGTGGAGGTAGTAGGCCTGGGGTAGGGGGGGGAGAGCAGCGGGG
GACGCAAGGGTCATTCATGTCGCAGCTTTCGGCAGGGGCCGTGCAACGCT
GTCCTTGGCCTGGGGCGTGGGACATGTGGGTGGAGGAATGCCTGAGAGAT
GCTCAGGTGGGGTGTGTTGTGTATTTACTGCGTGACTAGTGTAGCCTCTC
TTTTTGTGTTGTGTCTTTTTTTTCGGGTAAGACTTTTGCACCTTGGTTGA
TTTGAACAATGAGAAAGTTGTGGACCGAGATTGAGTTGTTCATCATAGTG
AAGGTTACGGTATACCTGTTTGATCTGTTTGGATTTGTGATCTGTTTGGT
CGGTCTTCGTTTTGGAAAAAAAGAAGAAGAAATTAATGGTCGATTTTATG
TTTTGTTACTTGTATATAGTTTTAACGAGATTTTCGTCATGATGAGGGTT
TGGTTGACTGTTGAAAAGTCGACAAACAGCGTATATATACACTGTAGAGA
TTTTGAAGTGCGGGTATTGGTTGGCGTGGTCGTGTGGCGCTTGTGTATGT
GTGTGTTTGGCGCTTATGACGGGAAGGTCAGGCAGGCCCAGCGATGATGT
AAGTATTATATATAAGTTGGCGGGTTGCTACGAATTACAGCCGAGCATGT
GGAGGGTGATTGGTCGGACTAATTGCGTCTGCGACCTGGTCCACACGGAA
ATGTTTTCCCAAGAGTTGAGTATGTACGTGTGATGTTTTGAATGTTGTCG
AACGACTGAAGAAAAATGAGAGTGAGGAAGAAACTGTTAACTGTAGGACT
GAATTGATAACCGGTTGACGCTGACGGGGTTCAATGAAACGATGACGTTT
AGTCATGTGGCTTGTTCACCAATATGCAGTATTATTATATTACTCTTTGC
CAACATTACCTTTTTTTGGCACATGTCGTTTTTTGGGCTTTAATGTCAAA
CCTCTAAATAAGCAGCGTCAGCCAGAGAGCTAAAAATTGACGCAATCACT
TGACGTTGAAGAGGGAATTCAAACGAATCACAACCTTAAACGTCGGGCTC
ATGCAGCACTGATCGCCAACTTCGTGGCATCGTGTGTCTTTCTATCGTGA
AAGGTGCGGCCACCTCACCCTGGGGCTGTAACAGCCCACGCTACGCTCTT
GAGGGTACTCCGAGTCAGCACCATCTGTGGCCTGCCTGGAGAGGAAGCTC
CAGGGCTCTTCCTGCGGGGGTGAGCTTGCTGGGCGGTGTATCCTCGCAAG
ACGTAAACGTGCAATGTCCGAGGCAAACATTAATAAGGGTGTACCTCGAA
ATAGACCGAACTTGAGCAAAACAAAAAGCTGTTCTTAACGACCGGCTGTG
TAAGTACAGTAAGGATGGCACCGGTCCGGTAACGAGAAAGCCAAAAATAG
CTTAATATATGTATATATATATCTGTACAACTTTCCCCTCTGAAAATTGT
GCTTAACGGTGACCCCCTATTCTAGTTCCTGTATGCTACGTGTTAGTCCA
TGGCTCAGACCCGCAGTCAGGATATTACAGACTGGGCCTAAAGAGAGACG
CCAACTACAGCCGATGGGCTAAACATGACGAATCGATGCGTTCTGCACCA
CAATTACGGAATTCCCTGCAATTCTGTAAGCATCGTGGAGTGTACCGGCC
GCTCGGATCGAGTATTTTCTTTCATTTTACCATTTATTACTAGAGCGACT
GAATGTACGGCCGGTTAGAGGCTAATATGAGGCAGTTTGGTACGGAATTC
AAGATAACCAAGTTCGTGCCCGATCACCCTGAAAACTTATGTGCGTATCG
CTGATACTACAACGAGAAGAAATATACTTGTCTCGATTCCCGATTCGTCG
GCGTTTAAAAGTTATGACCGGCATAAAATTGGCAAAAAAAAAAAAAAAAG
AGAGCGAAAAAATCGTAGGTAATTTGGACGCCTGTACTACGGGCATCTTC
AACGAGTCACTCTCTTTCAAATTTGGGAATTTTGACCTGAATTTTCGAGG
AGATCATCTAATTGTGCATGCGAAGACGTAAGATTTTTTTTTTTTTTGGT
TCTCATACTGGCGTTTCAGCTATTATACCATGCTTAGAGCGAATTACCCA
AAAATTCATTCAACGGGCTATTCTCGTTCGAATTCAAGGAGTCTTGACTT
GAAATTTTGAAGTAATGAGCGCATCGAGATTAGTGAGGCTTTTCATTATT
TGTTTTATTTTTGTTTCGGAAGATATGGATCTTTAAAACCGAAAAATCAT
GAAAATGTCCGTATCTTCCCGAGAGAGAAAAAAAAAAACGCGAGTGGACG
CCTTGGTATTCTCGGTGCGTCCATCACCTCGAAATTTCAAGTCAAAGCTC
CTTAAATTCGTCCACTGTTTTTGCTCTCTCTTGATGGGTTAAGCTCGTAA
TATCAGATTTATATACTGTACTCCCACAGACAGTGCCCATACCGTACAAA
TTCTAACGGTCATGCAAAACGCACAAATAAGATACTGGAGAATGGTTAAT
GGTTAACGGTTACCGTAACAAAAAGGTTTGCCCGTATGTACACATGTATA
CTGTATGCTCAGGGGCGACTTGTGCGCGGAGGCATCGCTGTGTAACAGTC
GTCTGGCGACCCCAGCCCCCGAGAGAGGAGTGATTGGGGAACAAGCTCGG
ATTACAGCCCATCGCGAGACTTACATCAGGCGTGCCTTGGAGGCGATCGT
GCCGCGCCCTGCCCAGACAATATACAGGTATTAGTGTTTCGTGTGTGTAT
TATGCTCGTGTTGGCGTTCTGCTGTAGTCCCGGCATATTAATGAAAAACA
CCACTGTAGGGTTAGGGTTAGGGTTTAGACGAGCATGAGATTTTTGGGGG
GGAATTTGATGGACGAGGTTAATCAAGTCTCTGGAAACAAGCCGTGGCAC
AAGATGATATTTCCTTGCTTCGCCGATACGAAAAACAAGCATGAGTACAG
CTTGAAACATAGTGTCTAATTAGCAGACTCTTTTGAAGGTATCGTGTAGA
ATTATCTTACCGGTACTGTTGGAAAACGCAAGGGTCTGATTCAGCAGTTC
AAGTTTGCGCTTAATGCCGTGCTGTCTTCGTTGGTGGTCGGGTTCCGGGT
GTTACGGTTGTTGTTCTGTTGTGCTTGTGTGTCTGTCCTTCAATGTGAGG
CGACACATTGATTAAGATTTCGTATTTGTTACCCTTGATGGCCAGACTCG
CGCAGGACTTCGGTATCCCGGAAGATTCGGTTCGCGGGTGGCACTGCCTG
GTTCTTCTCCGACGGGGACATGACGTTCTCGGGGAGGAGGCTATGGCTCA
GGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig8977:100..8553+ >mRNA_H-paniculata_contig8977.16829.1 ID=mRNA_H-paniculata_contig8977.16829.1|Name=mRNA_H-paniculata_contig8977.16829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5688bp|location=Sequence derived from alignment at H-paniculata_contig8977:100..8553+ (Halopteris paniculata Hal_grac_a_UBK monoicous) TTACAGGAATTCCTTGACACCGTCTCGCTCGTTCTCGAACTCCCGGAAAC GCCTCCAACACTCGAGACCTCGCGGACCGCCGGAGGAAACAAGTGCGATC AGACCACTGGCCCCTTGTTACGTTTCATCGAACCCGTCGCCGGTGAAACT AACCAAAAGGTGGTAGCAGCCCCCGCCGCTTCGGCTATCCGATCCCGACC CAACACCAGCGACGGAAAATTGTCCGCGCATTCGTTGGCATCGTCCGTGG CATCGAGCGCCAACCGCTTCGCGCAAGGAGAGTTGTCAATTGGCTCCGGT GGCGGTGGCGGCGGCGGCGGCCGCGCTGCTTCGACAGGGATAGCCGCCGA ACGTGCGAATTGCCGCGAGCATCTGGTCCGATGGCTATTCCGGCCGTTAC TCTCTGATGCCTTCGCGATGGCCTCTTTAACGCAAGCATTGGCTCTCCTG GGGATTGCGGGAAAAGAGCACGCTGTTACGCTTGTACGGGATATGTCGGT GTGGTTTCTGGCGCTGCCGGTCGACCGCGCCGCCGATATCACCGTCGGCC GAGAGGCGCAGAATTGCCCGGTGCTACGATGGGTCAAGGGAATGATCATG CTTACAGTGTCACCGACGCCCTCTCAAAATGGGATGGCTACTAGCAGCAG CGGGGGCTTGAGGGCGGAAGACTGGGGGCGTGATGGTGATTCCGCGTTTA ATGGTGAAGGCGGTGGCAAGATGTCGAGGGTGTTGGACGCGAAGAGCGGT CGGCGTGTCAGTGGATTTGGCGCACTGTTTGGCGATGATCCCGGGTGTGA CGACAAGGAAGGAGAGGGTGCTGGAGGTTTGCAGATGGGAGGGGGCAAGG GATTGGCGGACGCTGCGGGGAGCGGCGCCTTGTTATCCACCTTACAGGAA TTCCTTGACACCGTCTCGCTCGTTCTCGAACTCCCGGAAACGCCTCCAAC ACTCGAGACCTCGCGGACCGCCGGAGGAAACAAGTGCGATCAGACCACTG GCCCCTTGTTACGTTTCATCGAACCCGTCGCCGGTGAAACTAACCAAAAG GTGGTAGCAGCCCCCGCCGCTTCGGCTATCCGATCCCGACCCAACACCAG CGACGGAAAATTGTCCGCGCATTCGTTGGCATCGTCCGTGGCATCGAGCG CCAACCGCTTCGCGCAAGGAGAGTTGTCAATTGGCTCCGGTGGCGGTGGC GGCGGCGGCGGCCGCGCTGCTTCGACAGGGATAGCCGCCGAACGTGCGAA TTGCCGCGAGCATCTGGTCCGATGGCTATTCCGGCCGTTACTCTCTGATG CCTTCGCGATGGCCTCTTTAACGCAAGCATTGGCTCTCCTGGGGATTGCG GGAAAAGAGCACGCTGTTACGCTTGTACGGGATATGTCGGTGTGGTTTCT GGCGCTGCCGGTCGACCGCGCCGCCGATATCACCGTCGGCCGAGAGGCGC AGAATTGCCCGGTGCTACGATGGGTCAAGGGAATGATCATGCTTACAGTG TCACCGACGCCCTCTCAAAATGGGATGGCTACTAGCAGCAGCGGGGGCTT GAGGGCGGAAGACTGGGGGCGTGATGGTGATTCCGCGTTTAATGGTGAAG GCGGTGGCAAGATGTCGAGGGTGTTGGACGCGAAGAGCGGTCGGCGTGTC AGTGGATTTGGCGCACTGTTTGGCGATGATCCCGGGTGTGACGACAAGGA AGGAGAGGGTGCTGGAGGTTTGCAGATGGGAGGGGGCAAGGGATTGGCGG ACGCTGCGGGGAGCGGCGCCTTGTTATCCACCGACGATGATGACGATGAC AGCAATCTCCACGCCGAGACAGAGGCAATGCTCCGCCCCATGTATGAAGC CTGCGCGGCCTCGCAGAGGCTCGAGAATGCCGCAATGCTGTCGGTCGTTA CGGCGGAGGCGTTGTCGGCGTGTCGGGAGAGACTCGAAGAGAGCTCTCTC GGCCGCGTCGCCATTGGAGGAGACGAGCTATGGGTCGTTCTTTCCAGAAG GTTAAGAATCTGCTTGTTCTTTGACCACCGTCTTCACTCGGGGGAATCGG CGGCGCAGGACAGGACGATGATGACGATGACAGCAATCTCCACGCCGAGA CAGAGGCAATGCTCCGCCCCATGTATGAAGCCTGCGCGGCCTCGCAGAGG CTCGAGAATGCCGCAATGCTGTCGGTCGTTACGGCGGAGGCGTTGTCGGC GTGTCGGGAGAGACTCGAAGAGAGCTCTCTCGGCCGCGTCGCCATTGGAG GAGACGAGCTATGGGTCGTTCTTTCCAGAAGGTTAAGAATCTGCTTGTTC TTTGACCACCGTCTTCACTCGGGGGAATCGGCGGCGCAGGACAGGACGCG CATCTCGGTGCGGCAATTGGAAGAGGGCAAAGCCTCAGTCTACTCTCTCA TCGCCAAAGACCAGCTGATTTCCGCCGAAGATCTGAGATGCGCCGCTTGC GCGTCTCGCGAGGGTGCCGAGGTGGAGGCGTCGTCGCGCAGTCAACGGGA GGCCGCCGAGGCTAAAGCCTTGGCGGTGAAGACGAGGTCCGATCGCCGTG GAGGCGGTCGCGGCGGGGGAAGGCGAGGAGCGGGTCTTGTCAAGCAGAAA AACGGAGAGATAGGTGGTGAGAGGAAGGCAGTGGCTCTGGCAGCAGCTCC GAGCTTGGCAGACGCGCACATGGATGAGTACTGGAGAGAGGACGCGCATC TCGGTGCGGCAATTGGAAGAGGGCAAAGCCTCAGTCTACTCTCTCATCGC CAAAGACCAGCTGATTTCCGCCGAAGATCTGAGATGCGCCGCTTGCGCGT CTCGCGAGGGTGCCGAGGTGGAGGCGTCGTCGCGCAGTCAACGGGAGGCC GCCGAGGCTAAAGCCTTGGCGGTGAAGACGAGGTCCGATCGCCGTGGAGG CGGTCGCGGCGGGGGAAGGCGAGGAGCGGGTCTTGTCAAGCAGAAAAACG GAGAGATAGGTGGTGAGAGGAAGGCAGTGGCTCTGGCAGCAGCTCCGAGC TTGGCAGACGCGCACATGGATGAGTACTGGAGAGAGGTGCAAGCCGTGGC AACACGCCAGCGAGAGCTCGGAAATCGTAAAAAAATACCGTCCACCTCAG CCACATTTTCCCTCAACTTGGCCATTGCCGGCCTATCGACAACAGCCACC ACCGCCACCATTGCCACCAAGTCTACGGAAAAGAACATTGCCAAAGTCAC GGACCAATCACAGGTCTCTAGAGGGAAAGCCCCGACTCTAAGTCCCACGA GTCTATTTTTCATGCGCTCGCACGCGCAGCCGATTGTGTTGGCTTGTCAC CGCGCCCGATGGCTTGTCCGCTCCTGGGCATCCATTGGCCCAGCGGCGAC ATGGGTATTGAGTGGCGATGGCGGCGTGAACACAGGAGAGTGGACAGCTG CGGCCATTGCCGAGAAGGCTAATGCGGCAGAGGGCGCCGTGCGTCTTTTA TCGCTTGCGGTGGACCACCTGAGCTACCTGAATACTGCCAGGCCGTTTCT TGCTGGCTGCGTTGCGTATTGGCTGTGGGAGCATGGGAGAGTGCGGGCGC ACGTGAGAGACTTGCTAACCGGAGGGAGTGGAAGAGGAGGGGTGCCAACG TGCAAGCCGTGGCAACACGCCAGCGAGAGCTCGGAAATCGTAAAAAAATA CCGTCCACCTCAGCCACATTTTCCCTCAACTTGGCCATTGCCGGCCTATC GACAACAGCCACCACCGCCACCATTGCCACCAAGTCTACGGAAAAGAACA TTGCCAAAGTCACGGACCAATCACAGGTCTCTAGAGGGAAAGCCCCGACT CTAAGTCCCACGAGTCTATTTTTCATGCGCTCGCACGCGCAGCCGATTGT GTTGGCTTGTCACCGCGCCCGATGGCTTGTCCGCTCCTGGGCATCCATTG GCCCAGCGGCGACATGGGTATTGAGTGGCGATGGCGGCGTGAACACAGGA GAGTGGACAGCTGCGGCCATTGCCGAGAAGGCTAATGCGGCAGAGGGCGC CGTGCGTCTTTTATCGCTTGCGGTGGACCACCTGAGCTACCTGAATACTG CCAGGCCGTTTCTTGCTGGCTGCGTTGCGTATTGGCTGTGGGAGCATGGG AGAGTGCGGGCGCACGTGAGAGACTTGCTAACCGGAGGGAGTGGAAGAGG AGGGGTGCCAACCAGGGATGCGAACGGAACAGATCCAGCCGATGCTCTCC ACGACCGTCAAGTACAAACTGCACAAAATGCAGCAAGCACTAACAGCATA TTTGCAGCAGCAGGGAGACCCGCACGCGAGGCCTTTCTAGCTGCCGCCGA GGAGTTTCTACACGTGAAGGTCTTGTTCTGCGGCGGGGGTGGCCGCCCGC AGCAGGGCGCGGAGCCAGGCGGTCGATGGGGCGGCGGTGGAGGTAGTAGG CCTGGGGTAGGGGGGGGAGAGCAGCGGGGGACGCAAGGGTCATTCATGTC GCAGCTTTCGGCAGGGGCCGTGCAACGCTGTCCTTGGCCTGGGGCGTGGG ACATGTGGGTGGAGGAATGCCTGAGAGATGCTCAGCAGGGATGCGAACGG AACAGATCCAGCCGATGCTCTCCACGACCGTCAAGTACAAACTGCACAAA ATGCAGCAAGCACTAACAGCATATTTGCAGCAGCAGGGAGACCCGCACGC GAGGCCTTTCTAGCTGCCGCCGAGGAGTTTCTACACGTGAAGGTCTTGTT CTGCGGCGGGGGTGGCCGCCCGCAGCAGGGCGCGGAGCCAGGCGGTCGAT GGGGCGGCGGTGGAGGTAGTAGGCCTGGGGTAGGGGGGGGAGAGCAGCGG GGGACGCAAGGGTCATTCATGTCGCAGCTTTCGGCAGGGGCCGTGCAACG CTGTCCTTGGCCTGGGGCGTGGGACATGTGGGTGGAGGAATGCCTGAGAG ATGCTCAGGTGCGGCCACCTCACCCTGGGGCTGTAACAGCCCACGCTACG CTCTTGAGGGTACTCCGAGTCAGCACCATCTGTGGCCTGCCTGGAGAGGA AGCTCCAGGGCTCTTCCTGCGGGGGTGCGGCCACCTCACCCTGGGGCTGT AACAGCCCACGCTACGCTCTTGAGGGTACTCCGAGTCAGCACCATCTGTG GCCTGCCTGGAGAGGAAGCTCCAGGGCTCTTCCTGCGGGGGGGCGACTTG TGCGCGGAGGCATCGCTGTGTAACAGTCGTCTGGCGACCCCAGCCCCCGA GAGAGGAGTGATTGGGGAACAAGCTCGGATTACAGCCCATCGCGAGACTT ACATCAGGCGTGCCTTGGAGGCGATCGTGCCGCGCCCTGCCCAGACAATA TACAGGGGCGACTTGTGCGCGGAGGCATCGCTGTGTAACAGTCGTCTGGC GACCCCAGCCCCCGAGAGAGGAGTGATTGGGGAACAAGCTCGGATTACAG CCCATCGCGAGACTTACATCAGGCGTGCCTTGGAGGCGATCGTGCCGCGC CCTGCCCAGACAATATACAGACTCGCGCAGGACTTCGGTATCCCGGAAGA TTCGGTTCGCGGGTGGCACTGCCTGGTTCTTCTCCGACGGGGACATGACG TTCTCGGGGAGGAGGCTATGGCTCAGGTGACTCGCGCAGGACTTCGGTAT CCCGGAAGATTCGGTTCGCGGGTGGCACTGCCTGGTTCTTCTCCGACGGG GACATGACGTTCTCGGGGAGGAGGCTATGGCTCAGGTG back to top
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