prot_H-paniculata_contig8977.16829.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8977.16829.1
Unique Nameprot_H-paniculata_contig8977.16829.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length948
Homology
BLAST of mRNA_H-paniculata_contig8977.16829.1 vs. uniprot
Match: D8LQI6_ECTSI (Rab3 GTPase-activating protein, non-catalytic subunit, distant homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI6_ECTSI)

HSP 1 Score: 555 bits (1431), Expect = 3.950e-173
Identity = 393/880 (44.66%), Postives = 472/880 (53.64%), Query Frame = 0
Query:  116 AERANCREHLVRWLFRPLLSDAFAMASLTQALALLGIAGKE-HAVTLVRDMSVWFLALPVDRAADITVGREAQNCPVLRWVKGMIMLTVSPTPSQNGMATSSSGGLRAEDWGRDGDSAFN------GEGGGKMSRVLDAKSGRRVSGFGALFGDDPGCDDKEGEGAGGLQMGGGKGLADAAGSGALLSTXXXXXXSNLHAETEA--MLRPMYEACAASQRLENAAMLSVVTAEALSACRERLEESSLGRVAIGGDELWVVLSRRLRICLFFDHRLHSGESAAQDRTRISVRQLEEGKASVYSLIAKDQLISAEDLRCAACASREGAEVEASSRSQREAAEAKALAVKTRSDRRGGGRXXXXRGAGLVKQKNGEIGGERK-AVALAAAPSLADAHMDEYWREVQAVATRQRELGNRKKIPSTSATFSLNLAIAGLSTTAXXXXXXXXSTEKNIAKVTDQSQVSRGKA---------------------PTLSPTSLFFMRSHAQPIVLACHRARWLVRSWASIGPAATWVL--SGDGGVNTGEWTAAAIAEKANAAEGAVRLLSLAVDHLSYLNTARPFLAGCVAYWLWEHGRVRAHVRDLLTGGSGRGGVPTRDANGTDPADALHDRQVQTAQNAASTNSIFAAAGRPAREAFLAAAEEFLHVKVLFCGGGGRPQQGAEPGGRWGGGGXSRPGVGGGEQRGTQGSFMSQLSAGAVQRCPWPGAWDMWVEECLRDAQVRPPHPGAVTAHATLLRVLRVSTICGLPGEEAPGLFLRGGDLCAEASLCNSRLATPA--------------PERGVIGEQARITAHRETYIRRALEAIVPRPAQTIYRLAQDFGIPEDSVRGWHCLVLLRRGHDVLGEEAMAQV 948
            A+ A CR  L  WLFRPLLSDAFA+ASLTQAL+LLG+ G    A  LVRD++ WFL LPV RAAD TVGREAQNCPVLRW+KG+I+   S +  ++             D G DGD   +             SR+ D      V G G +     G DD +G  A                       XXXXXX+    E +A  +LRPM+EACAASQRLENA+MLSVVTAEAL+ACRE+LEESSLG+VAIGG E WV L+RRLR+CLF DHRLH G  A Q R R S+R+ EEGKASVY+ +AKDQL+S  DL  AAC++RE  EVEAS+RSQREAAE      + ++     GR       G  +++   + GE     A+AAA SLADA MDE+WR VQAVA R    GN   +           A+ G+               +N  +  +Q+   RG +                     P   PTSLFFMRSHAQPIVLACHR RWLV SWAS GP +   L  + D G         A++E   A E AVR LSLAVDHLSYL TARP LAG  A      G+V +   D+                                                                                                        SFMS L+ GAVQRCPWPGAWD WVEECLRDAQV PP   AV AH+TLLR LRVS +CGLP E+  GLF +G  LCA++SL +  LA+PA              P  GV GE+  + A RE+YIRRAL+A+VPRPAQ +YRLA+DFG+ ED+VRGWHCLVLLRRGHDVLGEEA++Q+
Sbjct:  785 ADYARCRTRLFGWLFRPLLSDAFALASLTQALSLLGLGGGNGQAAVLVRDLAAWFLELPVGRAADTTVGREAQNCPVLRWLKGVILAWASSSTKRS-----------TADGGEDGDDGVSFLDRETAAPPDTESRMKDLFGDPVVRGRGVIVAG--GTDDADGGEAASXXXXXXXXXXXXXXXXXXXXXXXXXXXAEEGGEKDAEEILRPMFEACAASQRLENASMLSVVTAEALAACREKLEESSLGQVAIGGGEAWVTLARRLRLCLFLDHRLHWGVLAGQ-RDRASLRRFEEGKASVYAFVAKDQLMSFRDLSFAACSARERGEVEASARSQREAAE------EAKAXXXXXGRQLVR---GEQRRRPSALAGEDGIGHAVAAASSLADAQMDEHWRAVQAVAARA---GNSPMMA----------ALGGVVPAVAEPRAGPGGNRENKPRRDEQASSPRGHSHRKSGDGAGAAEGSVVLPGTFPESPPTSLFFMRSHAQPIVLACHRTRWLVLSWASTGPRSEEALRRAADRG---------ALSESVGATEAAVRRLSLAVDHLSYLRTARPLLAGGGA-----GGKVLSSAADV--------------------------------------------------------------------------------------------------------SFMSLLTEGAVQRCPWPGAWDRWVEECLRDAQVHPPLQAAVAAHSTLLRALRVSAVCGLPEEDTLGLFEQGRSLCADSSLSDENLASPAVSGGDRRTAVGAPPPGEGVQGER-HVVAQRESYIRRALDAVVPRPAQNVYRLARDFGVSEDTVRGWHCLVLLRRGHDVLGEEALSQI 1509          
BLAST of mRNA_H-paniculata_contig8977.16829.1 vs. uniprot
Match: A0A835ZG00_9STRA (Rab3 GTPase-activating protein regulatory subunit N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG00_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.130e-32
Identity = 176/652 (26.99%), Postives = 248/652 (38.04%), Query Frame = 0
Query:  313 MLRPMYEACAASQRLENAAMLSVVTAEALSACRERLEESSLGRVAIGGDELWVVLSRRLRICLFFDHRLHSGESAAQDRTRISVRQLEEGKA--SVYSLIAKDQLISAEDLRCAACASREGAEVEASSRSQREAAEAKALAVKTRSDRRGGGRXXXXRGAGLVKQKNGEIGGERKAVALAAAPSLADAHMDEYWREVQAVATRQRELGNRKKIPSTSATFSLNLAIAGLSTTAXXXXXXXXSTEKNIAKVTDQSQVSRGKAPTLSPTSLFFMRSHAQPIVLACHRARWLVRSWASIGPAATWVLSGDGGVNTGEWTAAAIAEKANAAEGAVRLLSLAVDHLSYLNTARPFLAGCVAYWLWEHGRVRAHVRDLLTGGSGRGGVPTRDANGTDPADALHDRQVQTAQNAASTNSIFAAAGRPAREAFLAAAEEFLHVKVLFCGGGGRPQQGAEPGGRWGGGGXSRPGVGGGEQRGTQGSFMSQL----SAGAVQRCPWPGAWDMWVEECLRDAQVRPPHPGAVTAHATLLRVLRVSTICGLPGEEAPGLFLRGGDLCA--EASLCNSRLAT-PAPERGVIG---EQARITA------HRETYIRRALEAIVPRPAQTIYRLAQDFGIPEDSVRGWHCLVLLRRGHDVLGEEAMA 946
            +L+P+Y+AC AS  LE A +L+VV  EA +A    +E  SLG V + G   W  L+RRLR CL   HRL  G  A  +   ++V+QLEEG+A  S+ +++AKDQL++ +DL  AAC +RE  E++A+    R+AA A                                 GG   A   +A P +     D  WR+V  VA      G+                  G                                      T L+F  +HAQP++LACHRARWL+ SWA++         G GG +                  A++ L  AV+HLSY+      LAG VAY LW  G +R +      G + R   P  +A+    A  L        Q     ++I A                        C                        G   G   G Q  ++ +     S G              V   L       P   A+ AH  LL+ LRV++ CG  G +A  +        A  E +L ++R+ T P    G +G   E AR  A       R  ++  AL A+    A  +Y LAQ  G    +VR  H   LL RG D+  E  ++
Sbjct:  827 LLQPVYDACRASAALEAALLLAVVAGEAEAAAAAHVESRSLGAVVLNGAARWAALARRLRACLLLRHRLAHGRGA--ESASLTVQQLEEGRAPSSMAAMLAKDQLVTYDDLATAACRAREADELQAAHDWWRDAAAA---------------------------------GGA--AAGASALPGVTHVCADARWRDVMEVAAAHSRRGSXXXXXXXXXXXXXXXXXQGR-------------------------------------TLLWFFPAHAQPLLLACHRARWLMMSWAAMA-------RGGGGAD------------------ALQPLGAAVEHLSYVGAVHRALAGAVAYRLWNSG-LRQYA-----GAAARSAAPLLEAD----AAVLQVAISAAEQFLGHIDAIAADXXXXXXXXXXXXXXXXXRQAATECA-------------------LEAEGAAAGAWPGAQDRWLHECLFGSSGGDXXXXXXXXXXXXXVGLVL-------PRRAALEAHGVLLQALRVASTCGFAGADALRVLPAAAAERAFREGALADARVVTNPGTRAGGVGGAEEAARAAAAGPLGERRRAFVSAALHALGGASAAGVYALAQRLGEDAGAVRIAHTRALLARGRDLEAETLLS 1343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8977.16829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQI6_ECTSI3.950e-17344.66Rab3 GTPase-activating protein, non-catalytic subu... [more]
A0A835ZG00_9STRA3.130e-3226.99Rab3 GTPase-activating protein regulatory subunit ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8977contigH-paniculata_contig8977:100..8553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8977.16829.1mRNA_H-paniculata_contig8977.16829.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8977 100..8553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8977.16829.1 ID=prot_H-paniculata_contig8977.16829.1|Name=mRNA_H-paniculata_contig8977.16829.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=948bp
LQEFLDTVSLVLELPETPPTLETSRTAGGNKCDQTTGPLLRFIEPVAGET
NQKVVAAPAASAIRSRPNTSDGKLSAHSLASSVASSANRFAQGELSIGSG
GGGGGGGRAASTGIAAERANCREHLVRWLFRPLLSDAFAMASLTQALALL
GIAGKEHAVTLVRDMSVWFLALPVDRAADITVGREAQNCPVLRWVKGMIM
LTVSPTPSQNGMATSSSGGLRAEDWGRDGDSAFNGEGGGKMSRVLDAKSG
RRVSGFGALFGDDPGCDDKEGEGAGGLQMGGGKGLADAAGSGALLSTDDD
DDDSNLHAETEAMLRPMYEACAASQRLENAAMLSVVTAEALSACRERLEE
SSLGRVAIGGDELWVVLSRRLRICLFFDHRLHSGESAAQDRTRISVRQLE
EGKASVYSLIAKDQLISAEDLRCAACASREGAEVEASSRSQREAAEAKAL
AVKTRSDRRGGGRGGGRRGAGLVKQKNGEIGGERKAVALAAAPSLADAHM
DEYWREVQAVATRQRELGNRKKIPSTSATFSLNLAIAGLSTTATTATIAT
KSTEKNIAKVTDQSQVSRGKAPTLSPTSLFFMRSHAQPIVLACHRARWLV
RSWASIGPAATWVLSGDGGVNTGEWTAAAIAEKANAAEGAVRLLSLAVDH
LSYLNTARPFLAGCVAYWLWEHGRVRAHVRDLLTGGSGRGGVPTRDANGT
DPADALHDRQVQTAQNAASTNSIFAAAGRPAREAFLAAAEEFLHVKVLFC
GGGGRPQQGAEPGGRWGGGGGSRPGVGGGEQRGTQGSFMSQLSAGAVQRC
PWPGAWDMWVEECLRDAQVRPPHPGAVTAHATLLRVLRVSTICGLPGEEA
PGLFLRGGDLCAEASLCNSRLATPAPERGVIGEQARITAHRETYIRRALE
AIVPRPAQTIYRLAQDFGIPEDSVRGWHCLVLLRRGHDVLGEEAMAQV
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