prot_H-paniculata_contig894.16809.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig894.16809.1
Unique Nameprot_H-paniculata_contig894.16809.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: A0A6H5L9N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9N8_9PHAE)

HSP 1 Score: 164 bits (415), Expect = 7.330e-46
Identity = 110/292 (37.67%), Postives = 136/292 (46.58%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGADLGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGT------------------------------------------------------------------------------------------------AQYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQGYAFVVFGGEDLPATLDL--ESDLTGSNG--MVFKGAITGEHT-----------DRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFGQVSYA 181
            DFNGDG GDIVIGAPGA  G GRAYV++GN S  +  FDVS LE+   AGLV+ G +GGT                                                                                                 QYTG P++ AGDVN DG+ D+LVGSP AG  SQG+ ++VFGG  LP  ++L    D+ G N   +VFKGA+TGE             D  G++VSG FD+NGDG+SD +IGAPEGGT G  +GE Y+VFGQ + A
Sbjct:   66 DFNGDGVGDIVIGAPGASDGVGRAYVVYGNSSGIDEDFDVSALEDRDSAGLVMTGRQGGTFSHSIGYAVAAAGDVNGDSLMDVMVGAYGSSHLSEGAAHVVYGTNTSAAYDSSFLDLGAGDGGGLDGVDGFTLSGMSIEIELYAKLLSDTLDRQLSLQYTGNPLSSAGDVNGDGYGDILVGSPTAGAVSQGHTYLVFGGAGLPGRVNLTESDDVAGGNEGVVVFKGALTGEFVIICGFHDLCSIDESGFSVSGGFDMNGDGLSDFIIGAPEGGTIGEFDGEAYVVFGQENLA 357          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: D7G3P0_ECTSI (Integrins alpha chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P0_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 6.680e-40
Identity = 89/210 (42.38%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGAD-LGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTA------------------------QYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQGYAFVVFGGEDLPATLDL--ESDLTGSNG--MVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFGQVSYA 181
            D NGD   D+++G+ G+  L  G A+V++G  +    ++D S L+  +  G  L G +G T                         QYTG P++ AGDVN DG+ D+LVGSP AG   QG+ ++VFGG  LP+ ++L    D+TG N   +VFKGA+T    D  G++VSG FD+NGDG+SD +IGAPEGGTTG  +GE Y++FGQ + A
Sbjct:   66 DVNGDSLMDVMVGSYGSSHLSEGAAHVVYGTNT--SAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIELYAKLISDTLDRQLSLQYTGNPLSSAGDVNGDGYGDILVGSPTAGAVYQGHTYLVFGGAGLPSRVNLTESDDVTGGNEGVVVFKGALT----DESGFSVSGGFDMNGDGLSDFIIGAPEGGTTGEFDGEAYVIFGQENLA 269          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: D7G550_ECTSI (Integrin alpha chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G550_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 5.590e-38
Identity = 89/210 (42.38%), Postives = 125/210 (59.52%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGAD-LGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTA------------------------QYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQGYAFVVFGGEDLPATLDL--ESDLTGSNG--MVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFGQVSYA 181
            D NGD   D+++G+ G+  L  G A+V++G  +    ++D S L+  +  G  L G +G T                         QYTG P++ AGDVN DG+ D+LVGSP AG   QG+ ++VFGG  LP+ ++L    D+TG N   +VFKGA+T    D  G++VSG FD+NGDG+SD +IGAPEGGTTG  +GE Y++FGQ + A
Sbjct:   66 DVNGDSLMDVMVGSYGSSHLSEGAAHVVYGTNT--SAAYDASFLDLGAGGGGGLDGVDGFTLSGMSIEIELYAKLISDTLDRQLSLQYTGNPLSSAGDVNGDGYGDILVGSPTAGAVYQGHTYLVFGGAGLPSRVNLTESDDVTGGNEGVVVFKGALT----DESGFSVSGGFDMNGDGLSDFIIGAPEGGTTGEFDGEAYVIFGQENLA 269          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: UPI00034B8D6D (FG-GAP repeat protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI00034B8D6D)

HSP 1 Score: 134 bits (337), Expect = 4.420e-33
Identity = 86/189 (45.50%), Postives = 120/189 (63.49%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGA-DLGN----GRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGTSS----QGYAFVVFG-GEDLPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALN--GEVYIVFGQ 177
            D NGDG GD++IGAP A   GN    G AYV+FG+      S D++ L+ ++  G V+ G +  +    G  V+ AGDVN DG DD+++G+P AG+S     QG A+VVFG G+D  A+L+L +DL GSNG V  G    +  D +G +VSG  D+NGDGV D++IGAP+ G++G  +  GE YI+FG 
Sbjct:  268 DINGDGVGDLIIGAPNAGSSGNYSDQGEAYVIFGSSDGFAASLDLTALDGSN--GFVITGID--SNDNLGHSVSSAGDVNGDGIDDLIIGAPNAGSSGNYSDQGEAYVVFGNGDDFAASLNL-ADLDGSNGFVITGI---DDYDNLGRSVSGAGDINGDGVDDLIIGAPDAGSSGNYSDEGEAYIIFGS 448          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: D8K4V9_NITWC (FG-GAP repeat protein n=1 Tax=Nitrosococcus watsoni (strain C-113) TaxID=105559 RepID=D8K4V9_NITWC)

HSP 1 Score: 134 bits (336), Expect = 4.620e-33
Identity = 85/188 (45.21%), Postives = 110/188 (58.51%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGADLGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGT-----SSQGYAFVVFGGEDLPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFGQVSYAFP 183
            D NGDG  DIVIG  G    +G +YV+FG  +    + D+S L+ ++  G VL  T   T   TG  V+ AGDVN DGFDD+LVG+P  GT      S GY++VVFG    P+ + L  DL GSNG +  G   G   DR+G++V G  DVNGDGV DI++GAP     G  +G+ Y+VFG  S   P
Sbjct:  385 DVNGDGIDDIVIGQAGFSGYSGLSYVVFGTNAGFPAAVDLSALDGSN--GFVLGSTL--TGSRTGFSVSGAGDVNGDGFDDLLVGAP--GTYPFEGDSLGYSYVVFGASTFPSAILLPYDLDGSNGFIINGTELG---DRLGHSVGGVGDVNGDGVDDIILGAPSASPNGENSGQSYVVFGTPSVGGP 563          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: UPI001A09BD96 (FG-GAP repeat protein n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI001A09BD96)

HSP 1 Score: 129 bits (325), Expect = 1.590e-31
Identity = 80/186 (43.01%), Postives = 115/186 (61.83%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGAD---LGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAA---GTSSQGYAFVVFGGED-LPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFGQVS 179
            D NGDG  D+++GA  AD     +G +YV+FG     + + ++S L+  +  G V+ G   GT  ++G  V+ AGDVN DGFDD++VG+P A   G  S G ++VVFG +    A+LDL S+L GSNG V  G   G   DR+G ++SG  D+NGDGV D++IGA      G  +GE Y++FG+V+
Sbjct:  323 DVNGDGIDDLIVGAASADPNGSNSGESYVVFGRRGGFDTNLELSSLDGRN--GFVINGV--GTLDFSGNAVSSAGDVNGDGFDDLIVGAPLADPSGNQSGGESYVVFGRDGGFGASLDL-SNLDGSNGFVVNGIDEG---DRLGVSISGAGDINGDGVDDLIIGADSANPNGGDSGESYVIFGRVA 500          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: UPI001E2BA31C (Ig-like domain-containing protein n=1 Tax=Nostoc mirabile TaxID=2907820 RepID=UPI001E2BA31C)

HSP 1 Score: 129 bits (324), Expect = 2.650e-31
Identity = 83/189 (43.92%), Postives = 117/189 (61.90%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGADLGN-----GRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQ---GYAFVVFG-GEDLPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALN-GEVYIVFGQVS 179
            D NGDG+ D++IGA  A   +     G++YV+FG+ S    SFD S L+ ++  G V+ GT+GG   Y+G  V+ AGD+N DGFDD+++G+P AG + +   G ++VVFG      A+L+L S L GSNG V  G  TG+ +   G++VS   D+NGDG  D++IGAP G   G    GE Y+VFG  S
Sbjct:  652 DINGDGFDDLIIGAQDASDNDDKFRAGQSYVVFGSSSGFGASFDFSSLDGSN--GFVINGTDGG--DYSGYSVSNAGDINGDGFDDLIIGAPGAGPNGKSRAGESYVVFGKSSGFGASLNLSS-LDGSNGFVINGIDTGDFS---GWSVSNAGDINGDGFDDLIIGAPRGEPNGKSRAGESYVVFGSSS 832          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: A0A1Z4S0N2_9NOSO (Putative outer membrane adhesin n=1 Tax=Nostoc sp. NIES-4103 TaxID=2005458 RepID=A0A1Z4S0N2_9NOSO)

HSP 1 Score: 128 bits (322), Expect = 4.950e-31
Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGADLGN----GRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQGYA-----FVVFGGED-LPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALN-GEVYIVFGQVS 179
            DFNGDG  D++IGAP AD       G +YV+FG+ S    S D+S L+ ++  G V+ G    T  Y+G  V+ AGDVN DGFDD+++G+P A  + Q YA     +VVFG      A+L+L ++L GSNG V  G    ++ DR G++VS   D+NGDG+SD++IGAP+    G    G  Y+VFG  S
Sbjct:  781 DFNGDGISDLIIGAPYADPNGQSRAGSSYVVFGSSSGFGASLDLSSLDGSN--GFVINGIN--TGDYSGISVSSAGDVNGDGFDDLIIGAPNADPNGQSYAGAGSSYVVFGSSSGFGASLNL-AELDGSNGFVINGI---DNYDRSGFSVSSAGDINGDGISDLIIGAPDADPNGQSRAGSSYVVFGSSS 962          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: D8LR46_ECTSI (Integrin alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR46_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 6.510e-31
Identity = 77/181 (42.54%), Postives = 116/181 (64.09%), Query Frame = 0
Query:    1 DFNGDGYGDIVIG-APGADLGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQGYAFVVFGGEDLPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFGQVSY 180
            D N DG+ D+++G +P +    G AYV+FG+ES+S L+ DVS L+ T+  G  + GT+ G   + G  V  AGDVN DG+DDV+VG+  A +S+ G   VVFG    PA + + +DL GS G V  GA T   +D  G++++   DVN DG +D++IGA +    G+++GEVY+VFG +++
Sbjct:   60 DVNNDGFNDVILGESPDSTSTAGAAYVVFGSESFSALNLDVSALDGTN--GFKIEGTDAG--DFAGTAVCGAGDVNGDGYDDVMVGAWGA-SSAAGEILVVFGAATFPAVVGV-ADLDGSAGFVMLGATT---SDAAGFSLAAAGDVNNDGAADMIIGAFQSDPAGSMSGEVYVVFGSLTW 231          
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Match: B4WT86_SYNS7 (Type I secretion target GGXGXDXXX repeat protein domain protein n=1 Tax=Synechococcus sp. (strain ATCC 29403 / PCC 7335) TaxID=91464 RepID=B4WT86_SYNS7)

HSP 1 Score: 127 bits (319), Expect = 1.170e-30
Identity = 81/182 (44.51%), Postives = 116/182 (63.74%), Query Frame = 0
Query:    1 DFNGDGYGDIVIGAPGAD---LGNGRAYVLFGNESWSELSFDVSDLENTSHAGLVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGT--SSQGYAFVVFGGE-DLPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDGVSDIVIGAPEGGTTGALNGEVYIVFG 176
            D NGDG+ D+VIGAPG+D    G+G +YV+FG++   + +F++S+L+ ++  G  L G    T   +G+ V+ AGDVN DGFDD+++G+P +    S  G ++VVFG +    ATL+L S L GSNG V  G   G   D  GY+VSG  D+NGDG  D++IGAP     G  +G+ Y+VFG
Sbjct:  173 DVNGDGFDDLVIGAPGSDPNGSGSGESYVVFGSDMSVDPTFNLSNLDGSN--GFALNGIN--TFDSSGRSVSGAGDVNGDGFDDLIIGAPGSDPNGSGSGESYVVFGSDVGFGATLELSS-LDGSNGFVISGIDAG---DVSGYSVSGAGDLNGDGFDDLIIGAPGERFRGDTSGQSYVVFG 346          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig894.16809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9N8_9PHAE7.330e-4637.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3P0_ECTSI6.680e-4042.38Integrins alpha chain n=1 Tax=Ectocarpus siliculos... [more]
D7G550_ECTSI5.590e-3842.38Integrin alpha chain n=1 Tax=Ectocarpus siliculosu... [more]
UPI00034B8D6D4.420e-3345.50FG-GAP repeat protein n=1 Tax=Pleurocapsa sp. PCC ... [more]
D8K4V9_NITWC4.620e-3345.21FG-GAP repeat protein n=1 Tax=Nitrosococcus watson... [more]
UPI001A09BD961.590e-3143.01FG-GAP repeat protein n=1 Tax=filamentous cyanobac... [more]
UPI001E2BA31C2.650e-3143.92Ig-like domain-containing protein n=1 Tax=Nostoc m... [more]
A0A1Z4S0N2_9NOSO4.950e-3143.68Putative outer membrane adhesin n=1 Tax=Nostoc sp.... [more]
D8LR46_ECTSI6.510e-3142.54Integrin alpha n=1 Tax=Ectocarpus siliculosus TaxI... [more]
B4WT86_SYNS71.170e-3044.51Type I secretion target GGXGXDXXX repeat protein d... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013519Integrin alpha beta-propellorSMARTSM00191int_alpha_rptcoord: 60..116
e-value: 0.0078
score: 25.4
coord: 132..184
e-value: 0.0092
score: 25.2
coord: 1..40
e-value: 7.6
score: 13.4
IPR013519Integrin alpha beta-propellorPROSITEPS51470FG_GAPcoord: 121..183
score: 9.744
IPR013519Integrin alpha beta-propellorPROSITEPS51470FG_GAPcoord: 1..36
score: 8.979
IPR013519Integrin alpha beta-propellorPROSITEPS51470FG_GAPcoord: 50..109
score: 8.766
IPR013517FG-GAP repeatPFAMPF01839FG-GAPcoord: 137..174
e-value: 6.1E-7
score: 29.4
coord: 71..99
e-value: 5.2E-6
score: 26.5
coord: 1..27
e-value: 4.1E-5
score: 23.6
IPR028994Integrin alpha, N-terminalGENE3D2.130.10.130coord: 113..181
e-value: 7.6E-10
score: 40.5
coord: 1..112
e-value: 9.7E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR23221GLYCOSYLPHOSPHATIDYLINOSITOL PHOSPHOLIPASE Dcoord: 1..109
coord: 116..180
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig894contigH-paniculata_contig894:28570..30164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig894.16809.1mRNA_H-paniculata_contig894.16809.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig894 28570..30164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig894.16809.1 ID=prot_H-paniculata_contig894.16809.1|Name=mRNA_H-paniculata_contig894.16809.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
DFNGDGYGDIVIGAPGADLGNGRAYVLFGNESWSELSFDVSDLENTSHAG
LVLAGTEGGTAQYTGKPVAKAGDVNADGFDDVLVGSPAAGTSSQGYAFVV
FGGEDLPATLDLESDLTGSNGMVFKGAITGEHTDRVGYAVSGDFDVNGDG
VSDIVIGAPEGGTTGALNGEVYIVFGQVSYAFPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013519Int_alpha_beta-p
IPR013517FG-GAP
IPR028994Integrin_alpha_N