prot_H-paniculata_contig8840.16743.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig8840.16743.1
Unique Nameprot_H-paniculata_contig8840.16743.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length175
Homology
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BLAST of mRNA_H-paniculata_contig8840.16743.1 vs. uniprot
Match: A0A6H5KU96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU96_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.820e-57
Identity = 105/176 (59.66%), Postives = 131/176 (74.43%), Query Frame = 0 
Query:    1 MERAKKLVKATPPRGDEYLRMLQTVLHRESAWTQWKQVAKCQ-QIKTVPEIEAKQAADNAXXXXXXXXXXPAPSTRPALSGSKRQRPNAAKAAQERAKHAPLGSDFPLEQLVNNLRSGIPSSNEHLEDQRLCAEDPETPASELPSASPLYSWRALRLLGMDNPGNLEGCHDGDVVK 175
            +E AK+LVKATPPRG+EYL MLQ VL+RE+ WTQWK V KC+  I    E EA+   D A          P          +KR RP+A+ AA+ERAK++PLG+DFPLE++ + LR+G+P+S EHLEDQR+CAEDP+TPASELPSASPLY+WRALRLLG +NP NL GC+DGD+VK
Sbjct:  256 IELAKRLVKATPPRGEEYLSMLQIVLNRETFWTQWKDVNKCKLAITAAEEEEAQMEKDKAAGVVPRAPSYP----------NKRPRPSASVAARERAKYSPLGADFPLEKMASKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGRENPANLVGCYDGDLVK 421
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BLAST of mRNA_H-paniculata_contig8840.16743.1 vs. uniprot
Match: D7G2N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2N9_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.980e-55
Identity = 104/176 (59.09%), Postives = 130/176 (73.86%), Query Frame = 0 
Query:    1 MERAKKLVKATPPRGDEYLRMLQTVLHRESAWTQWKQVAKCQQIKTVP-EIEAKQAADNAXXXXXXXXXXPAPSTRPALSGSKRQRPNAAKAAQERAKHAPLGSDFPLEQLVNNLRSGIPSSNEHLEDQRLCAEDPETPASELPSASPLYSWRALRLLGMDNPGNLEGCHDGDVVK 175
            +E AK+LVKATPPRG+EYL MLQ VL+RE+ WTQWK V KC+   T   E E ++  D A          P          +KR RP+A+ AA ERAK++PLG+ FPLE++V+ LR+G+P+S EHLEDQR+CAEDP+TPASELPSASPLY+WRALRLLG +NP NL GC+DGD+VK
Sbjct:  539 IELAKRLVKATPPRGEEYLSMLQVVLNRETFWTQWKDVNKCKLAMTAAKEEETQREKDKAAGVVARAPSYP----------NKRPRPSASVAAGERAKYSPLGAGFPLERMVSKLRAGVPTSQEHLEDQRMCAEDPDTPASELPSASPLYTWRALRLLGRENPANLVGCYDGDLVK 704
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig8840.16743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU96_9PHAE1.820e-5759.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2N9_ECTSI1.980e-5559.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021861THO complex, subunit THOC1PFAMPF11957efThoc1coord: 4..167
e-value: 1.6E-12
score: 46.9
IPR021861THO complex, subunit THOC1PANTHERPTHR13265THO COMPLEX SUBUNIT 1coord: 2..162
NoneNo IPR availablePANTHERPTHR13265:SF0HPR1coord: 2..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig8840contigH-paniculata_contig8840:278..4011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig8840.16743.1mRNA_H-paniculata_contig8840.16743.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig8840 251..4011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig8840.16743.1 ID=prot_H-paniculata_contig8840.16743.1|Name=mRNA_H-paniculata_contig8840.16743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=175bp
MERAKKLVKATPPRGDEYLRMLQTVLHRESAWTQWKQVAKCQQIKTVPEI
EAKQAADNAAAAAAAAPVAPAPSTRPALSGSKRQRPNAAKAAQERAKHAP
LGSDFPLEQLVNNLRSGIPSSNEHLEDQRLCAEDPETPASELPSASPLYS
WRALRLLGMDNPGNLEGCHDGDVVK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021861THO_THOC1